RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ARHGAP22Q7Z5H3 698 aa9.11□□□□□ -0.95
TOM1L1-220ENST00000575333 ZBTB10Q96DT7 871 aa9.11□□□□□ -0.95
TOM1L1-220ENST00000575333 SPDL1Q96EA4 605 aa9.11□□□□□ -0.95
TOM1L1-220ENST00000575333 BICD1Q96G01 975 aa9.11□□□□□ -0.95
TOM1L1-220ENST00000575333 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
TOM1L1-220ENST00000575333 CCDC69A6NI79 296 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 GOLGA6L19H0YKK7 550 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 FERP16591 822 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 GBP2P32456 591 aaPredicted RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 RRP12Q5JTH9 1297 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 BARGINQ6ZT62 677 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 TTLL7Q6ZT98 887 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 TAX1BP1Q86VP1 789 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 LSM14AQ8ND56 463 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 ZCRB1Q8TBF4 217 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 ZDHHC16Q969W1 377 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 PPP1R13BQ96KQ4 1090 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 BICC1Q9H694 974 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 PDE11AQ9HCR9 933 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 KLC4Q9NSK0 619 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 RRP7BPQ9NSQ0 103 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 NRBP1Q9UHY1 535 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 FAN1Q9Y2M0 1017 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 CAPN7Q9Y6W3 813 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 MAGI2Q86UL8 1455 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 ARHGEF40Q8TER5 1519 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 KIDINS220Q9ULH0 1771 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 PYGLP06737 847 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 PAX3P23760 479 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 PSME1Q06323 249 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 SNCBQ16143 134 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 LRRC23Q53EV4 343 aaPredicted RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 VPS53Q5VIR6 699 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 CAPRIN2Q6IMN6 1127 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 GIMAP6Q6P9H5 292 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 LUZP1Q86V48 1076 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 FCHSD1Q86WN1 690 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 NUP133Q8WUM0 1156 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 LMBR1Q8WVP7 490 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 FBXW7Q969H0 707 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 CCDC47Q96A33 483 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 PAGR1Q9BTK6 254 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 OSBPL5Q9H0X9 879 aaPredicted RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 CBX8Q9HC52 389 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 CORO1CQ9ULV4 474 aaPredicted RBP9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 TTC21BQ7Z4L5 1316 aa9.1□□□□□ -0.95
TOM1L1-220ENST00000575333 MLH3Q9UHC1 1453 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 ATP7AQ04656 1500 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 TRPM1Q7Z4N2 1603 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 GOLGA6L7A0A1B0GV03 622 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 APAF1O14727 1248 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 FECHP22830 423 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 AARSP49588 968 aaKnown RBP eCLIP9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 PTGDRQ13258 359 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 TUBB2AQ13885 445 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 CCDC57Q2TAC2 916 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 KLHL10Q6JEL2 608 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 OGFOD1Q8N543 542 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 HDAC7Q8WUI4 952 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 TBC1D5Q92609 795 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 MARVELD3Q96A59 401 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 ARPC5LQ9BPX5 153 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 TUBB2BQ9BVA1 445 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 NUP62CLQ9H1M0 184 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 ABCF2Q9UG63 623 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 GGA2Q9UJY4 613 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 RAB21Q9UL25 225 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 PZPP20742 1482 aa9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 DNMT1P26358 1616 aaKnown RBP9.09□□□□□ -0.95
TOM1L1-220ENST00000575333 ABCA6Q8N139 1617 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 INO80Q9ULG1 1556 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 ASXL1Q8IXJ9 1541 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 RGS12O14924 1447 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 ABCC5O15440 1437 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 DAPK1P53355 1430 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 MSH6P52701 1360 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 MYL1P05976 194 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 YY1P25490 414 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC144BQ3MJ40 725 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 RBM43Q6ZSC3 357 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC144CPQ8IYA2 1237 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 HELBQ8NG08 1087 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 FAM163AQ96GL9 167 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 RBM17Q96I25 401 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC114Q96M63 670 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 PARD6BQ9BYG5 372 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 NAT10Q9H0A0 1025 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 FAM204AQ9H8W3 233 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 DDX19AQ9NUU7 478 aaKnown RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 CROCC2H7BZ55 1655 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 DIP2CQ9Y2E4 1556 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 C9orf84Q5VXU9 1444 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 SMARCA5O60264 1052 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 FCHSD2O94868 740 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms