RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 DBNDD1Q9H9R9 158 aa16.54■□□□□ 0.24
ERCC4-207ENST00000575156 GTF2IP78347 998 aa16.53■□□□□ 0.24
ERCC4-207ENST00000575156 NAA16Q6N069 864 aaPredicted RBP16.53■□□□□ 0.24
ERCC4-207ENST00000575156 LCORLQ8N3X6 602 aa16.53■□□□□ 0.24
ERCC4-207ENST00000575156 KCNQ5Q9NR82 932 aa16.53■□□□□ 0.24
ERCC4-207ENST00000575156 PIM2Q9P1W9 311 aa16.53■□□□□ 0.24
ERCC4-207ENST00000575156 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
ERCC4-207ENST00000575156 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
ERCC4-207ENST00000575156 CHD4Q14839 1912 aa16.52■□□□□ 0.24
ERCC4-207ENST00000575156 CYP21A2P08686 494 aa16.52■□□□□ 0.24
ERCC4-207ENST00000575156 CPA1P15085 419 aa16.52■□□□□ 0.24
ERCC4-207ENST00000575156 AOC3Q16853 763 aa16.52■□□□□ 0.24
ERCC4-207ENST00000575156 EYA3Q99504 573 aa16.52■□□□□ 0.24
ERCC4-207ENST00000575156 PRKAB2O43741 272 aa16.52■□□□□ 0.23
ERCC4-207ENST00000575156 DYNLL1P63167 89 aaKnown RBP16.52■□□□□ 0.23
ERCC4-207ENST00000575156 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.23
ERCC4-207ENST00000575156 MXD3Q9BW11 206 aa16.52■□□□□ 0.23
ERCC4-207ENST00000575156 FGAP02671 866 aa16.51■□□□□ 0.23
ERCC4-207ENST00000575156 LDHBP07195 334 aaKnown RBP16.51■□□□□ 0.23
ERCC4-207ENST00000575156 NEK4P51957 841 aa16.51■□□□□ 0.23
ERCC4-207ENST00000575156 CCDC93Q567U6 631 aa16.51■□□□□ 0.23
ERCC4-207ENST00000575156 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
ERCC4-207ENST00000575156 SNX21Q969T3 373 aa16.51■□□□□ 0.23
ERCC4-207ENST00000575156 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
ERCC4-207ENST00000575156 DIXDC1Q155Q3 683 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 MFSD14BQ5SR56 506 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 DZIP1Q86YF9 867 aaKnown RBP16.5■□□□□ 0.23
ERCC4-207ENST00000575156 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
ERCC4-207ENST00000575156 RIOK1Q9BRS2 568 aaKnown RBP16.5■□□□□ 0.23
ERCC4-207ENST00000575156 FAM205AQ6ZU69 1335 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 G3V3G9 751 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 ZKSCAN1P17029 563 aaPredicted RBP16.5■□□□□ 0.23
ERCC4-207ENST00000575156 BECN1Q14457 450 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 ZGPATQ8N5A5 531 aaKnown RBP16.5■□□□□ 0.23
ERCC4-207ENST00000575156 CERS5Q8N5B7 392 aa16.5■□□□□ 0.23
ERCC4-207ENST00000575156 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
ERCC4-207ENST00000575156 MAGEB6P1A0A0J9YX57 407 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 APPP05067 770 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
ERCC4-207ENST00000575156 HAND2P61296 217 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
ERCC4-207ENST00000575156 SPTY2D1Q68D10 685 aaPredicted RBP16.49■□□□□ 0.23
ERCC4-207ENST00000575156 ZNF277Q9NRM2 450 aaPredicted RBP16.49■□□□□ 0.23
ERCC4-207ENST00000575156 ECE2O60344 883 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 RNF20Q5VTR2 975 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 STOX1Q6ZVD7 989 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 HSCBQ8IWL3 235 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
ERCC4-207ENST00000575156 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
ERCC4-207ENST00000575156 PPIP5K2O43314 1243 aa16.48■□□□□ 0.23
ERCC4-207ENST00000575156 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
ERCC4-207ENST00000575156 SPON1Q9HCB6 807 aa16.48■□□□□ 0.23
ERCC4-207ENST00000575156 AATFQ9NY61 560 aaKnown RBP eCLIP16.48■□□□□ 0.23
ERCC4-207ENST00000575156 SLC4A4Q9Y6R1 1079 aa16.48■□□□□ 0.23
ERCC4-207ENST00000575156 TSGA10IPQ3SY00 556 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 SDR42E1Q8WUS8 393 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
ERCC4-207ENST00000575156 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
ERCC4-207ENST00000575156 PATL2C9JE40 543 aaKnown RBP16.47■□□□□ 0.23
ERCC4-207ENST00000575156 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 TBC1D22AQ8WUA7 517 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 PSMD1Q99460 953 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 ZSWIM6Q9HCJ5 1215 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
ERCC4-207ENST00000575156 F8W031 263 aaPredicted RBP16.46■□□□□ 0.23
ERCC4-207ENST00000575156 ST18O60284 1047 aa16.46■□□□□ 0.23
ERCC4-207ENST00000575156 NOL8Q76FK4 1167 aaKnown RBP16.46■□□□□ 0.23
ERCC4-207ENST00000575156 IFNL3Q8IZI9 196 aa16.46■□□□□ 0.23
ERCC4-207ENST00000575156 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
ERCC4-207ENST00000575156 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
ERCC4-207ENST00000575156 COL4A5P29400 1685 aa16.46■□□□□ 0.23
ERCC4-207ENST00000575156 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
ERCC4-207ENST00000575156 YDJCA8MPS7 323 aa16.46■□□□□ 0.22
ERCC4-207ENST00000575156 TTC14Q96N46 770 aa16.46■□□□□ 0.22
ERCC4-207ENST00000575156 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.22
ERCC4-207ENST00000575156 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.22
ERCC4-207ENST00000575156 CTNNA3Q9UI47 895 aa16.46■□□□□ 0.22
ERCC4-207ENST00000575156 SCN9AQ15858 1988 aa16.45■□□□□ 0.22
ERCC4-207ENST00000575156 MAST2Q6P0Q8 1798 aa16.45■□□□□ 0.22
ERCC4-207ENST00000575156 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
ERCC4-207ENST00000575156 E7EWF7 191 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 GNAT2P19087 354 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 RUFY3Q7L099 469 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 MROH7-TTC4A0A0A0MT08 1334 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 ALX1Q15699 326 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 IMMTQ16891 758 aaKnown RBP16.44■□□□□ 0.22
ERCC4-207ENST00000575156 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 NEK1Q96PY6 1258 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 NAPBQ9H115 298 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 CYP46A1Q9Y6A2 500 aa16.44■□□□□ 0.22
ERCC4-207ENST00000575156 CCDC88AQ3V6T2 1871 aa16.43■□□□□ 0.22
ERCC4-207ENST00000575156 NFKBIEO00221 500 aa16.43■□□□□ 0.22
ERCC4-207ENST00000575156 ZNF213O14771 459 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms