RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 MICU3Q86XE3 530 aa8.81□□□□□ -1
RPA1-207ENST00000574049 MIGA1Q8NAN2 632 aa8.81□□□□□ -1
RPA1-207ENST00000574049 AIDAQ96BJ3 306 aa8.81□□□□□ -1
RPA1-207ENST00000574049 LIMCH1Q9UPQ0 1083 aa8.81□□□□□ -1
RPA1-207ENST00000574049 PDE8BO95263 885 aa8.8□□□□□ -1
RPA1-207ENST00000574049 NTSR2O95665 410 aa8.8□□□□□ -1
RPA1-207ENST00000574049 IRF5Q13568 498 aa8.8□□□□□ -1
RPA1-207ENST00000574049 SLC9C2Q5TAH2 1124 aa8.8□□□□□ -1
RPA1-207ENST00000574049 COL23A1Q86Y22 540 aaPredicted RBP8.8□□□□□ -1
RPA1-207ENST00000574049 PROM2Q8N271 834 aa8.8□□□□□ -1
RPA1-207ENST00000574049 PI4K2BQ8TCG2 481 aa8.8□□□□□ -1
RPA1-207ENST00000574049 GNL3LQ9NVN8 582 aaKnown RBP8.8□□□□□ -1
RPA1-207ENST00000574049 ZNF827Q17R98 1081 aa8.8□□□□□ -1
RPA1-207ENST00000574049 SLC51AQ86UW1 340 aa8.8□□□□□ -1
RPA1-207ENST00000574049 RBSNQ9H1K0 784 aa8.8□□□□□ -1
RPA1-207ENST00000574049 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
RPA1-207ENST00000574049 RBM8AQ9Y5S9 174 aaKnown RBP8.8□□□□□ -1
RPA1-207ENST00000574049 FAM208AQ9UK61 1670 aaKnown RBP8.8□□□□□ -1
RPA1-207ENST00000574049 TTC41PQ6P2S7 1318 aa8.8□□□□□ -1
RPA1-207ENST00000574049 DNM1Q05193 864 aaKnown RBP8.8□□□□□ -1
RPA1-207ENST00000574049 SCARF1Q14162 830 aa8.8□□□□□ -1
RPA1-207ENST00000574049 A0A0D9SFI3 127 aa8.79□□□□□ -1
RPA1-207ENST00000574049 CARNS1A5YM72 827 aa8.79□□□□□ -1
RPA1-207ENST00000574049 ADCY5O95622 1261 aa8.79□□□□□ -1
RPA1-207ENST00000574049 HMGN5P82970 282 aaKnown RBP8.79□□□□□ -1
RPA1-207ENST00000574049 CCDC102BQ68D86 513 aa8.79□□□□□ -1
RPA1-207ENST00000574049 A0A087WWV3 80 aa8.79□□□□□ -1
RPA1-207ENST00000574049 STX6O43752 255 aa8.79□□□□□ -1
RPA1-207ENST00000574049 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
RPA1-207ENST00000574049 GYS1P13807 737 aa8.79□□□□□ -1
RPA1-207ENST00000574049 PUM3Q15397 648 aaKnown RBP8.79□□□□□ -1
RPA1-207ENST00000574049 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
RPA1-207ENST00000574049 KLHL10Q6JEL2 608 aa8.79□□□□□ -1
RPA1-207ENST00000574049 OLFM4Q6UX06 510 aa8.79□□□□□ -1
RPA1-207ENST00000574049 CCDC34Q96HJ3 373 aa8.79□□□□□ -1
RPA1-207ENST00000574049 PDGFDQ9GZP0 370 aaPredicted RBP8.79□□□□□ -1
RPA1-207ENST00000574049 ZSWIM4Q9H7M6 989 aa8.79□□□□□ -1
RPA1-207ENST00000574049 UTYO14607 1347 aa8.79□□□□□ -1
RPA1-207ENST00000574049 HIP1O00291 1037 aa8.79□□□□□ -1
RPA1-207ENST00000574049 UFL1O94874 794 aa8.79□□□□□ -1
RPA1-207ENST00000574049 SLC27A3Q5K4L6 730 aa8.79□□□□□ -1
RPA1-207ENST00000574049 NLGN1Q8N2Q7 840 aa8.79□□□□□ -1
RPA1-207ENST00000574049 NUP62CLQ9H1M0 184 aa8.79□□□□□ -1
RPA1-207ENST00000574049 BCCIPQ9P287 314 aaKnown RBP eCLIP8.79□□□□□ -1
RPA1-207ENST00000574049 RGS17Q9UGC6 210 aaPredicted RBP8.79□□□□□ -1
RPA1-207ENST00000574049 CNTNAP4Q9C0A0 1308 aa8.79□□□□□ -1
RPA1-207ENST00000574049 GADD45BO75293 160 aaPredicted RBP8.78□□□□□ -1
RPA1-207ENST00000574049 AK2P54819 239 aa8.78□□□□□ -1
RPA1-207ENST00000574049 PRR5LQ6MZQ0 368 aa8.78□□□□□ -1
RPA1-207ENST00000574049 USP48Q86UV5 1035 aa8.78□□□□□ -1
RPA1-207ENST00000574049 USP26Q9BXU7 913 aa8.78□□□□□ -1
RPA1-207ENST00000574049 IL25Q9H293 177 aa8.78□□□□□ -1
RPA1-207ENST00000574049 USP42Q9H9J4 1324 aaKnown RBP8.78□□□□□ -1
RPA1-207ENST00000574049 SRCAPQ6ZRS2 3230 aa8.78□□□□□ -1
RPA1-207ENST00000574049 ONECUT3O60422 494 aaPredicted RBP8.78□□□□□ -1
RPA1-207ENST00000574049 PTH1RQ03431 593 aa8.78□□□□□ -1
RPA1-207ENST00000574049 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.78□□□□□ -12e-8■■■□□ 19.2
RPA1-207ENST00000574049 STAP2Q9UGK3 403 aa8.78□□□□□ -1
RPA1-207ENST00000574049 PALD1Q9ULE6 856 aa8.78□□□□□ -1
RPA1-207ENST00000574049 CCDC69A6NI79 296 aa8.78□□□□□ -1
RPA1-207ENST00000574049 PATL2C9JE40 543 aaKnown RBP8.78□□□□□ -1
RPA1-207ENST00000574049 OFD1O75665 1012 aa8.78□□□□□ -1
RPA1-207ENST00000574049 CSF1RP07333 972 aa8.78□□□□□ -1
RPA1-207ENST00000574049 CCDC192P0DO97 292 aa8.78□□□□□ -1
RPA1-207ENST00000574049 RBM5P52756 815 aaKnown RBP eCLIP8.78□□□□□ -1
RPA1-207ENST00000574049 MAGEB6Q8N7X4 407 aa8.78□□□□□ -1
RPA1-207ENST00000574049 LPIN2Q92539 896 aa8.78□□□□□ -1
RPA1-207ENST00000574049 TRIM34Q9BYJ4 488 aa8.78□□□□□ -1
RPA1-207ENST00000574049 MRC1P22897 1456 aa8.77□□□□□ -1
RPA1-207ENST00000574049 ATP5JP18859 108 aa8.77□□□□□ -1
RPA1-207ENST00000574049 CHRNA5P30532 468 aa8.77□□□□□ -1
RPA1-207ENST00000574049 PPARDQ03181 441 aa8.77□□□□□ -1
RPA1-207ENST00000574049 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1
RPA1-207ENST00000574049 ZHX3Q9H4I2 956 aa8.77□□□□□ -1
RPA1-207ENST00000574049 RIPOR2Q9Y4F9 1068 aa8.77□□□□□ -1
RPA1-207ENST00000574049 SART3Q15020 963 aaKnown RBP8.77□□□□□ -1.01
RPA1-207ENST00000574049 OTUD7BQ6GQQ9 843 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 NAPBQ9H115 298 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 GOLGA8BA8MQT2 603 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 SERPINC1P01008 464 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 TPM3P06753 285 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 USP5P45974 858 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 MAP3K12Q12852 859 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 IMMTQ16891 758 aaKnown RBP8.77□□□□□ -1.01
RPA1-207ENST00000574049 DOK7Q18PE1 504 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 ZNF589Q86UQ0 364 aaPredicted RBP8.77□□□□□ -1.01
RPA1-207ENST00000574049 AMOTL1Q8IY63 956 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 UBAC1Q9BSL1 405 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 MINPP1Q9UNW1 487 aa8.77□□□□□ -1.01
RPA1-207ENST00000574049 CCDC66A2RUB6 948 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 DCAF8L1A6NGE4 600 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 ZNF213O14771 459 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 CYP7A1P22680 504 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 R3HDM1Q15032 1099 aaKnown RBP8.76□□□□□ -1.01
RPA1-207ENST00000574049 C2CD5Q86YS7 1000 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 ZSCAN29Q8IWY8 852 aaPredicted RBP8.76□□□□□ -1.01
RPA1-207ENST00000574049 ZKSCAN3Q9BRR0 538 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 OSBPL3Q9H4L5 887 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 KCPQ6ZWJ8 1503 aa8.76□□□□□ -1.01
RPA1-207ENST00000574049 PARP4Q9UKK3 1724 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms