RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 DIXDC1Q155Q3 683 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 HSP90AB4PQ58FF6 505 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 PRAMEF18Q5VWM3 479 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 TSHZ3Q63HK5 1081 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 USP48Q86UV5 1035 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 ERC1Q8IUD2 1116 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 SPATA5Q8NB90 893 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 EDC3Q96F86 508 aaKnown RBP8.59□□□□□ -1.03
SMG6-209ENST00000571442 ANTXR1Q9H6X2 564 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 DENND2AQ9ULE3 1009 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 DOCK2Q92608 1830 aa8.59□□□□□ -1.03
SMG6-209ENST00000571442 SALL1Q9NSC2 1324 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 SPDYE2BA6NHP3 402 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 SEMA3EO15041 775 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 CYP2E1P05181 493 aaPredicted RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 SPDYE6P0CI01 402 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 HDAC1Q13547 482 aaPredicted RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 TTC39AQ5SRH9 613 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 GORABQ5T7V8 394 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 CST9Q5W186 159 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 APOBEC3HQ6NTF7 200 aaKnown RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 CDAN1Q8IWY9 1227 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 MTMR14Q8NCE2 650 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 WDR66Q8TBY9 1149 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 ZC3H15Q8WU90 426 aaKnown RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 TBC1D22AQ8WUA7 517 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 ZNF512BQ96KM6 892 aaPredicted RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 TDRD3Q9H7E2 651 aaKnown RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 PIH1D3Q9NQM4 214 aaKnown RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 GNL3LQ9NVN8 582 aaKnown RBP8.58□□□□□ -1.04
SMG6-209ENST00000571442 HDAC9Q9UKV0 1011 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 DAGLAQ9Y4D2 1042 aa8.58□□□□□ -1.04
SMG6-209ENST00000571442 PDS5AQ29RF7 1337 aaKnown RBP8.57□□□□□ -1.04
SMG6-209ENST00000571442 CHGBP05060 677 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 UQCRFS1P1P0C7P4 283 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 RBM5P52756 815 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMG6-209ENST00000571442 CACNB3P54284 484 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 DLGAP5Q15398 846 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 CCDC158Q5M9N0 1113 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 KRT26Q7Z3Y9 468 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 ADGRA1Q86SQ6 560 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
SMG6-209ENST00000571442 OGFOD1Q8N543 542 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 ABCF2Q9UG63 623 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 SERPINA10Q9UK55 444 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 FZD1Q9UP38 647 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 MAST2Q6P0Q8 1798 aa8.57□□□□□ -1.04
SMG6-209ENST00000571442 SSC5DA1L4H1 1573 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 SALL3Q9BXA9 1300 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 CDK5RAP2Q96SN8 1893 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 LDHBP07195 334 aaKnown RBP8.56□□□□□ -1.04
SMG6-209ENST00000571442 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
SMG6-209ENST00000571442 HSPA1AP0DMV8 641 aaKnown RBP8.56□□□□□ -1.04
SMG6-209ENST00000571442 HSPA1BP0DMV9 641 aaKnown RBP8.56□□□□□ -1.04
SMG6-209ENST00000571442 MECOMQ03112 1051 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 SPDYE2Q495Y8 402 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 SLFNL1Q499Z3 407 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 CDC37L1Q7L3B6 337 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 SMC5Q8IY18 1101 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 DCPSQ96C86 337 aaKnown RBP8.56□□□□□ -1.04
SMG6-209ENST00000571442 NSUN4Q96CB9 384 aaKnown RBP8.56□□□□□ -1.04
SMG6-209ENST00000571442 CDCA5Q96FF9 252 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 ZDHHC15Q96MV8 337 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 BOLA2Q9H3K6 86 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 ZNF70Q9UC06 446 aaPredicted RBP8.56□□□□□ -1.04
SMG6-209ENST00000571442 SUGT1Q9Y2Z0 365 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 CNTNAP1P78357 1384 aa8.56□□□□□ -1.04
SMG6-209ENST00000571442 GAKO14976 1311 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 PITPNM2Q9BZ72 1349 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 HDLBPQ00341 1268 aaKnown RBP8.55□□□□□ -1.04
SMG6-209ENST00000571442 NFIAQ12857 509 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
SMG6-209ENST00000571442 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 CDC42EP5Q6NZY7 148 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 HHIPL2Q6UWX4 724 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 MOB2Q70IA6 237 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 ERICH6Q7L0X2 663 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 TNS4Q8IZW8 715 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 TEKT1Q969V4 418 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 MRIQ9BWK5 157 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 ZNF408Q9H9D4 720 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 VEZTQ9HBM0 779 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 CREBZFQ9NS37 354 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
SMG6-209ENST00000571442 RFX7Q2KHR2 1363 aa8.55□□□□□ -1.04
SMG6-209ENST00000571442 TCP10L2B9ZVM9 353 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 CAPN15O75808 1086 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 CELF2O95319 508 aaKnown RBP8.54□□□□□ -1.04
SMG6-209ENST00000571442 SLURP2P0DP57 97 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 ATP5JP18859 108 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 MMP14P50281 582 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 RHBDL3P58872 404 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 AAMPQ13685 434 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 ANKRD45Q5TZF3 282 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 DZIP1Q86YF9 867 aaKnown RBP8.54□□□□□ -1.04
SMG6-209ENST00000571442 SULF1Q8IWU6 871 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 ZFPM1Q8IX07 1006 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms