RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 C22orf23Q9BZE7 217 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 ANO2Q9NQ90 1003 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 ZNF277Q9NRM2 450 aaPredicted RBP14.31□□□□□ -0.12
CDRT1-206ENST00000571263 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 DOCK2Q92608 1830 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 FER1L6Q2WGJ9 1857 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 COL1A1P02452 1464 aaPredicted RBP14.31□□□□□ -0.12
CDRT1-206ENST00000571263 A0A0D9SFI3 127 aa14.3□□□□□ -0.12
CDRT1-206ENST00000571263 NFKBIEO00221 500 aa14.3□□□□□ -0.12
CDRT1-206ENST00000571263 SEC24BO95487 1268 aa14.3□□□□□ -0.12
CDRT1-206ENST00000571263 MECOMQ03112 1051 aa14.3□□□□□ -0.12
CDRT1-206ENST00000571263 TNIP1Q15025 636 aa14.3□□□□□ -0.12
CDRT1-206ENST00000571263 DSCC1Q9BVC3 393 aa14.3□□□□□ -0.12
CDRT1-206ENST00000571263 WWC3Q9ULE0 1092 aa14.3□□□□□ -0.12
CDRT1-206ENST00000571263 GRIN3BO60391 1043 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 PLCG2P16885 1265 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
CDRT1-206ENST00000571263 DACT2Q5SW24 774 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 RNF20Q5VTR2 975 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 ARHGAP27Q6ZUM4 889 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 MAP4K1Q92918 833 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
CDRT1-206ENST00000571263 MAGEB6P1A0A0J9YX57 407 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 VIL1P09327 827 aaKnown RBP14.28□□□□□ -0.12
CDRT1-206ENST00000571263 MYH7P12883 1935 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 LMNB1P20700 586 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 PRDX5P30044 214 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 EIF6P56537 245 aaKnown RBP14.28□□□□□ -0.12
CDRT1-206ENST00000571263 ANAPC15P60006 121 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 PPP4CP60510 307 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 HHIPL2Q6UWX4 724 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 AGBL3Q8NEM8 1001 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 TBC1D32Q96NH3 1257 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 NACAP1Q9BZK3 213 aa14.28□□□□□ -0.12
CDRT1-206ENST00000571263 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
CDRT1-206ENST00000571263 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
CDRT1-206ENST00000571263 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
CDRT1-206ENST00000571263 CCDC88AQ3V6T2 1871 aa14.27□□□□□ -0.12
CDRT1-206ENST00000571263 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.13
CDRT1-206ENST00000571263 GPAA1O43292 621 aa14.27□□□□□ -0.13
CDRT1-206ENST00000571263 CIAPIN1Q6FI81 312 aa14.27□□□□□ -0.13
CDRT1-206ENST00000571263 RSBN1LQ6PCB5 846 aaPredicted RBP14.27□□□□□ -0.13
CDRT1-206ENST00000571263 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.13
CDRT1-206ENST00000571263 STRBPQ96SI9 672 aaKnown RBP14.27□□□□□ -0.13
CDRT1-206ENST00000571263 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.13
CDRT1-206ENST00000571263 HDAC9Q9UKV0 1011 aa14.27□□□□□ -0.13
CDRT1-206ENST00000571263 TTF2Q9UNY4 1162 aaKnown RBP14.27□□□□□ -0.13
CDRT1-206ENST00000571263 MAST2Q6P0Q8 1798 aa14.27□□□□□ -0.13
CDRT1-206ENST00000571263 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 GPR75-ASB3A0A0A6YYF3 556 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 M0R2C6 588 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 HSPD1P10809 573 aaKnown RBP14.26□□□□□ -0.13
CDRT1-206ENST00000571263 ZKSCAN1P17029 563 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-206ENST00000571263 RPS12P25398 132 aaKnown RBP14.26□□□□□ -0.13
CDRT1-206ENST00000571263 HSPA4P34932 840 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 ALX1Q15699 326 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 GIMAP6Q6P9H5 292 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 OGFOD1Q8N543 542 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 TEKT1Q969V4 418 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 JAG2Q9Y219 1238 aa14.26□□□□□ -0.13
CDRT1-206ENST00000571263 GAKO14976 1311 aa14.25□□□□□ -0.13
CDRT1-206ENST00000571263 ZMYM6O95789 1325 aa14.25□□□□□ -0.13
CDRT1-206ENST00000571263 YDJCA8MPS7 323 aa14.25□□□□□ -0.13
CDRT1-206ENST00000571263 FZD9O00144 591 aa14.25□□□□□ -0.13
CDRT1-206ENST00000571263 GPR162Q16538 588 aa14.25□□□□□ -0.13
CDRT1-206ENST00000571263 ZNF589Q86UQ0 364 aaPredicted RBP14.25□□□□□ -0.13
CDRT1-206ENST00000571263 CRNKL1Q9BZJ0 848 aaKnown RBP14.25□□□□□ -0.13
CDRT1-206ENST00000571263 ATP8A2Q9NTI2 1148 aa14.25□□□□□ -0.13
CDRT1-206ENST00000571263 CHD4Q14839 1912 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 MBD4O95243 580 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 APPP05067 770 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 CXCL9Q07325 125 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 KRT32Q14532 448 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 NECTIN1Q15223 517 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 CERS5Q8N5B7 392 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 IL17RAQ96F46 866 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 RIOK1Q9BRS2 568 aaKnown RBP14.24□□□□□ -0.13
CDRT1-206ENST00000571263 IL25Q9H293 177 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 SLC4A4Q9Y6R1 1079 aa14.24□□□□□ -0.13
CDRT1-206ENST00000571263 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 PSMD14O00487 310 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 CHGBP05060 677 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 PTH1RQ03431 593 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 IMMTQ16891 758 aaKnown RBP14.23□□□□□ -0.13
CDRT1-206ENST00000571263 TSGA10IPQ3SY00 556 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 CCDC129Q6ZRS4 1044 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 MIGA1Q8NAN2 632 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 ZNF384Q8TF68 577 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 DPF2Q92785 391 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 KCNB2Q92953 911 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 ZDHHC15Q96MV8 337 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 ARMT1Q9H993 441 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 KCNQ5Q9NR82 932 aa14.23□□□□□ -0.13
CDRT1-206ENST00000571263 RBM8AQ9Y5S9 174 aaKnown RBP14.23□□□□□ -0.13
CDRT1-206ENST00000571263 PSME4Q14997 1843 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 ZC3H4Q9UPT8 1303 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms