RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 FBXO46Q6PJ61 603 aaPredicted RBP22.09■■□□□ 1.13
CIITA-206ENST00000571190 AKAP11Q9UKA4 1901 aa22.08■■□□□ 1.13
CIITA-206ENST00000571190 SLC34A2O95436 690 aa22.08■■□□□ 1.13
CIITA-206ENST00000571190 FGFR2P21802 821 aa22.08■■□□□ 1.13
CIITA-206ENST00000571190 BCAMP50895 628 aa22.08■■□□□ 1.13
CIITA-206ENST00000571190 CHAF1AQ13111 956 aaPredicted RBP22.08■■□□□ 1.13
CIITA-206ENST00000571190 TNFAIP1Q13829 316 aa22.08■■□□□ 1.13
CIITA-206ENST00000571190 ANKRD13AQ8IZ07 590 aa22.08■■□□□ 1.13
CIITA-206ENST00000571190 PTPN18Q99952 460 aa22.08■■□□□ 1.13
CIITA-206ENST00000571190 TCP10L2B9ZVM9 353 aa22.07■■□□□ 1.12
CIITA-206ENST00000571190 RFX5P48382 616 aaPredicted RBP22.07■■□□□ 1.12
CIITA-206ENST00000571190 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.07■■□□□ 1.12
CIITA-206ENST00000571190 CDCA7LQ96GN5 454 aa22.07■■□□□ 1.12
CIITA-206ENST00000571190 TMEM39BQ9GZU3 492 aa22.07■■□□□ 1.12
CIITA-206ENST00000571190 TESPA1A2RU30 521 aaPredicted RBP22.06■■□□□ 1.12
CIITA-206ENST00000571190 CAVIN4Q5BKX8 364 aa22.06■■□□□ 1.12
CIITA-206ENST00000571190 VPS37DQ86XT2 251 aa22.06■■□□□ 1.12
CIITA-206ENST00000571190 ELP3Q9H9T3 547 aa22.06■■□□□ 1.12
CIITA-206ENST00000571190 HDLBPQ00341 1268 aaKnown RBP22.05■■□□□ 1.12
CIITA-206ENST00000571190 CNKSR2Q8WXI2 1034 aa22.05■■□□□ 1.12
CIITA-206ENST00000571190 MS4A4AQ96JQ5 239 aa22.05■■□□□ 1.12
CIITA-206ENST00000571190 TRMT2AQ8IZ69 625 aaKnown RBP22.04■■□□□ 1.12
CIITA-206ENST00000571190 TBC1D22AQ8WUA7 517 aa22.04■■□□□ 1.12
CIITA-206ENST00000571190 OPTNQ96CV9 577 aa22.04■■□□□ 1.12
CIITA-206ENST00000571190 CACNB3P54284 484 aa22.03■■□□□ 1.12
CIITA-206ENST00000571190 CAP1Q01518 475 aa22.03■■□□□ 1.12
CIITA-206ENST00000571190 CRHR2Q13324 411 aa22.03■■□□□ 1.12
CIITA-206ENST00000571190 ALDH1L2Q3SY69 923 aa22.03■■□□□ 1.12
CIITA-206ENST00000571190 APOBEC3HQ6NTF7 200 aaKnown RBP22.03■■□□□ 1.12
CIITA-206ENST00000571190 OTOP1Q7RTM1 612 aa22.03■■□□□ 1.12
CIITA-206ENST00000571190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.03■■□□□ 1.12
CIITA-206ENST00000571190 MRIQ9BWK5 157 aa22.03■■□□□ 1.12
CIITA-206ENST00000571190 KIF16BQ96L93 1317 aa22.03■■□□□ 1.12
CIITA-206ENST00000571190 EYA2O00167 538 aa22.02■■□□□ 1.12
CIITA-206ENST00000571190 FRAT2O75474 233 aaPredicted RBP22.02■■□□□ 1.12
CIITA-206ENST00000571190 PUM3Q15397 648 aaKnown RBP22.02■■□□□ 1.12
CIITA-206ENST00000571190 ATG9AQ7Z3C6 839 aa22.02■■□□□ 1.12
CIITA-206ENST00000571190 TEKT1Q969V4 418 aa22.02■■□□□ 1.12
CIITA-206ENST00000571190 ZDHHC15Q96MV8 337 aa22.02■■□□□ 1.12
CIITA-206ENST00000571190 TRIM17Q9Y577 477 aa22.02■■□□□ 1.12
CIITA-206ENST00000571190 TNNI2P48788 182 aa22.01■■□□□ 1.11
CIITA-206ENST00000571190 MAP3K9P80192 1104 aa22.01■■□□□ 1.11
CIITA-206ENST00000571190 VGLL4Q14135 290 aa22.01■■□□□ 1.11
CIITA-206ENST00000571190 BRI3BPQ8WY22 251 aa22.01■■□□□ 1.11
CIITA-206ENST00000571190 IFIT1P09914 478 aaKnown RBP22■■□□□ 1.11
CIITA-206ENST00000571190 OTUD7BQ6GQQ9 843 aa21.99■■□□□ 1.11
CIITA-206ENST00000571190 CD99L2Q8TCZ2 262 aa21.99■■□□□ 1.11
CIITA-206ENST00000571190 SMC4Q9NTJ3 1288 aa21.99■■□□□ 1.11
CIITA-206ENST00000571190 SUGT1Q9Y2Z0 365 aa21.99■■□□□ 1.11
CIITA-206ENST00000571190 HHIPL2Q6UWX4 724 aa21.98■■□□□ 1.11
CIITA-206ENST00000571190 LPIN2Q92539 896 aa21.98■■□□□ 1.11
CIITA-206ENST00000571190 FKBP1CQ5VVH2 108 aa21.97■■□□□ 1.11
CIITA-206ENST00000571190 FAM83AQ86UY5 434 aa21.97■■□□□ 1.11
CIITA-206ENST00000571190 ERO1AQ96HE7 468 aa21.97■■□□□ 1.11
CIITA-206ENST00000571190 SNCAIPQ9Y6H5 919 aa21.97■■□□□ 1.11
CIITA-206ENST00000571190 TNRC18O15417 2968 aaPredicted RBP21.97■■□□□ 1.11
CIITA-206ENST00000571190 ECM29Q5VYK3 1845 aa21.96■■□□□ 1.11
CIITA-206ENST00000571190 SLC5A1P13866 664 aa21.96■■□□□ 1.11
CIITA-206ENST00000571190 OTUD5Q96G74 571 aa21.96■■□□□ 1.11
CIITA-206ENST00000571190 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
CIITA-206ENST00000571190 PTPN22Q9Y2R2 807 aa21.96■■□□□ 1.11
CIITA-206ENST00000571190 CCL15-CCL14A0A0B4J2E2 113 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 SPDYE5A6NIY4 337 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 GTF2A2P52657 109 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 SP3Q02447 781 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 CCL15Q16663 113 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 FAM43AQ8N2R8 423 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 CSADQ9Y600 493 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 MAST3O60307 1309 aa21.95■■□□□ 1.1
CIITA-206ENST00000571190 UBTFL1P0CB47 393 aaPredicted RBP21.94■■□□□ 1.1
CIITA-206ENST00000571190 WDR66Q8TBY9 1149 aa21.94■■□□□ 1.1
CIITA-206ENST00000571190 ZKSCAN4Q969J2 545 aaPredicted RBP21.94■■□□□ 1.1
CIITA-206ENST00000571190 SIL1Q9H173 461 aa21.94■■□□□ 1.1
CIITA-206ENST00000571190 TMOD2Q9NZR1 351 aa21.94■■□□□ 1.1
CIITA-206ENST00000571190 CIAO1O76071 339 aa21.93■■□□□ 1.1
CIITA-206ENST00000571190 PRPF38BQ5VTL8 546 aaKnown RBP21.93■■□□□ 1.1
CIITA-206ENST00000571190 ARAP2Q8WZ64 1704 aa21.93■■□□□ 1.1
CIITA-206ENST00000571190 WRNIP1Q96S55 665 aa21.93■■□□□ 1.1
CIITA-206ENST00000571190 EFCC1Q9HA90 598 aa21.93■■□□□ 1.1
CIITA-206ENST00000571190 FBXO3Q9UK99 471 aa21.93■■□□□ 1.1
CIITA-206ENST00000571190 DAGLAQ9Y4D2 1042 aa21.93■■□□□ 1.1
CIITA-206ENST00000571190 POTEFA5A3E0 1075 aa21.92■■□□□ 1.1
CIITA-206ENST00000571190 PRDX5P30044 214 aa21.92■■□□□ 1.1
CIITA-206ENST00000571190 TAF1CQ15572 869 aaPredicted RBP21.92■■□□□ 1.1
CIITA-206ENST00000571190 DIXDC1Q155Q3 683 aa21.92■■□□□ 1.1
CIITA-206ENST00000571190 ERO1BQ86YB8 467 aa21.92■■□□□ 1.1
CIITA-206ENST00000571190 PA2G4Q9UQ80 394 aaKnown RBP21.92■■□□□ 1.1
CIITA-206ENST00000571190 RPAP1Q9BWH6 1393 aaPredicted RBP21.91■■□□□ 1.1
CIITA-206ENST00000571190 IRF6O14896 467 aa21.91■■□□□ 1.1
CIITA-206ENST00000571190 CT47B1P0C2W7 299 aaPredicted RBP21.91■■□□□ 1.1
CIITA-206ENST00000571190 ATP2B3Q16720 1220 aa21.91■■□□□ 1.1
CIITA-206ENST00000571190 CDC42EP5Q6NZY7 148 aa21.91■■□□□ 1.1
CIITA-206ENST00000571190 MIGA2Q7L4E1 593 aa21.91■■□□□ 1.1
CIITA-206ENST00000571190 ZFYVE28Q9HCC9 887 aa21.91■■□□□ 1.1
CIITA-206ENST00000571190 CEP126Q9P2H0 1117 aa21.91■■□□□ 1.1
CIITA-206ENST00000571190 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
CIITA-206ENST00000571190 LAMB1P07942 1786 aa21.91■■□□□ 1.1
CIITA-206ENST00000571190 PHKA1P46020 1223 aa21.9■■□□□ 1.1
CIITA-206ENST00000571190 NFIAQ12857 509 aa21.9■■□□□ 1.1
CIITA-206ENST00000571190 INTS3Q68E01 1043 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms