RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DDX54Q8TDD1 881 aaKnown RBP7.21□□□□□ -1.26
NUP88-202ENST00000570937 UBL7Q96S82 380 aaPredicted RBP7.21□□□□□ -1.26
NUP88-202ENST00000570937 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
NUP88-202ENST00000570937 CYP11A1P05108 521 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 LDHBP07195 334 aaKnown RBP7.2□□□□□ -1.26
NUP88-202ENST00000570937 FCGRTP55899 365 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 FGD1P98174 961 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 UVSSAQ2YD98 709 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 ANKRD34AQ69YU3 496 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 DTHD1Q6ZMT9 781 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 NPAS4Q8IUM7 802 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 C3orf58Q8NDZ4 430 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 FRMD6Q96NE9 622 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 TRIM56Q9BRZ2 755 aaKnown RBP7.2□□□□□ -1.26
NUP88-202ENST00000570937 RUSC1Q9BVN2 902 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 TMPRSS13Q9BYE2 586 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 OSBPL7Q9BZF2 842 aa7.2□□□□□ -1.26
NUP88-202ENST00000570937 ZCCHC6Q5VYS8 1495 aaKnown RBP7.19□□□□□ -1.26
NUP88-202ENST00000570937 DLGAP3O95886 979 aa7.19□□□□□ -1.26
NUP88-202ENST00000570937 ERCC3P19447 782 aa7.19□□□□□ -1.26
NUP88-202ENST00000570937 FAM46AQ96IP4 442 aaKnown RBP7.19□□□□□ -1.26
NUP88-202ENST00000570937 USP26Q9BXU7 913 aa7.19□□□□□ -1.26
NUP88-202ENST00000570937 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
NUP88-202ENST00000570937 SUGCTQ9HAC7 445 aa7.19□□□□□ -1.26
NUP88-202ENST00000570937 SPG7Q9UQ90 795 aa7.19□□□□□ -1.26
NUP88-202ENST00000570937 DCAF1Q9Y4B6 1507 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 PRPF40AO75400 957 aaKnown RBP7.18□□□□□ -1.26
NUP88-202ENST00000570937 GSTT1P30711 240 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 AP3B2Q13367 1082 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 POU4F3Q15319 338 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 CCDC27Q2M243 656 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 EAPPQ56P03 285 aaPredicted RBP7.18□□□□□ -1.26
NUP88-202ENST00000570937 EXOSC6Q5RKV6 272 aaKnown RBP7.18□□□□□ -1.26
NUP88-202ENST00000570937 PRR23CQ6ZRP0 262 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 SMG8Q8ND04 991 aaKnown RBP7.18□□□□□ -1.26
NUP88-202ENST00000570937 ANKRD24Q8TF21 1146 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 SEMA6BQ9H3T3 888 aa7.18□□□□□ -1.26
NUP88-202ENST00000570937 ITGB7P26010 798 aa7.17□□□□□ -1.26
NUP88-202ENST00000570937 ARMC10Q8N2F6 343 aa7.17□□□□□ -1.26
NUP88-202ENST00000570937 C12orf49Q9H741 205 aa7.17□□□□□ -1.26
NUP88-202ENST00000570937 CYP4F12Q9HCS2 524 aa7.17□□□□□ -1.26
NUP88-202ENST00000570937 TIAF1O95411 115 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 CTSBP07858 339 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 MAOBP27338 520 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 GNA15P30679 374 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 HP1BP3Q5SSJ5 553 aaPredicted RBP7.16□□□□□ -1.26
NUP88-202ENST00000570937 NUTM2GQ5VZR2 741 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 FDX2Q6P4F2 183 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 MYRFLQ96LU7 910 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 TMEM39AQ9NV64 488 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 PPM1HQ9ULR3 514 aa7.16□□□□□ -1.26
NUP88-202ENST00000570937 PREPP48147 710 aa7.15□□□□□ -1.26
NUP88-202ENST00000570937 PPP2R3AQ06190 1150 aa7.15□□□□□ -1.26
NUP88-202ENST00000570937 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.15□□□□□ -1.26
NUP88-202ENST00000570937 CORO1BQ9BR76 489 aa7.15□□□□□ -1.26
NUP88-202ENST00000570937 FAM8A1Q9UBU6 413 aa7.15□□□□□ -1.26
NUP88-202ENST00000570937 AKAP2Q9Y2D5 859 aa7.15□□□□□ -1.26
NUP88-202ENST00000570937 HIF3AQ9Y2N7 669 aa7.15□□□□□ -1.26
NUP88-202ENST00000570937 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
NUP88-202ENST00000570937 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
NUP88-202ENST00000570937 DHX15O43143 795 aaKnown RBP7.14□□□□□ -1.27
NUP88-202ENST00000570937 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
NUP88-202ENST00000570937 SLC51AQ86UW1 340 aa7.14□□□□□ -1.27
NUP88-202ENST00000570937 UTP4Q969X6 686 aaKnown RBP7.14□□□□□ -1.27
NUP88-202ENST00000570937 NECAB3Q96P71 396 aaPredicted RBP7.14□□□□□ -1.27
NUP88-202ENST00000570937 SYNGAP1Q96PV0 1343 aa7.14□□□□□ -1.27
NUP88-202ENST00000570937 PSMG3-AS1Q96PY0 264 aa7.14□□□□□ -1.27
NUP88-202ENST00000570937 GPN3Q9UHW5 284 aaPredicted RBP7.14□□□□□ -1.27
NUP88-202ENST00000570937 RAXQ9Y2V3 346 aa7.14□□□□□ -1.27
NUP88-202ENST00000570937 SART1O43290 800 aaKnown RBP7.13□□□□□ -1.27
NUP88-202ENST00000570937 ECEL1O95672 775 aa7.13□□□□□ -1.27
NUP88-202ENST00000570937 ZNF157P51786 506 aaPredicted RBP7.13□□□□□ -1.27
NUP88-202ENST00000570937 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
NUP88-202ENST00000570937 FAM20CQ8IXL6 584 aa7.13□□□□□ -1.27
NUP88-202ENST00000570937 DUSP9Q99956 384 aaKnown RBP7.13□□□□□ -1.27
NUP88-202ENST00000570937 AK5Q9Y6K8 562 aa7.13□□□□□ -1.27
NUP88-202ENST00000570937 GSTP1P09211 210 aaKnown RBP7.12□□□□□ -1.27
NUP88-202ENST00000570937 USP17L7P0C7H9 530 aa7.12□□□□□ -1.27
NUP88-202ENST00000570937 EIF4BP23588 611 aaKnown RBP7.12□□□□□ -1.27
NUP88-202ENST00000570937 SOX4Q06945 474 aaPredicted RBP7.12□□□□□ -1.27
NUP88-202ENST00000570937 PDZD3Q86UT5 571 aa7.12□□□□□ -1.27
NUP88-202ENST00000570937 C12orf50Q8NA57 414 aaPredicted RBP7.12□□□□□ -1.27
NUP88-202ENST00000570937 CEP44Q9C0F1 390 aa7.12□□□□□ -1.27
NUP88-202ENST00000570937 KRT82Q9NSB4 513 aa7.12□□□□□ -1.27
NUP88-202ENST00000570937 ENC1O14682 589 aa7.11□□□□□ -1.27
NUP88-202ENST00000570937 NME2P22392 152 aa7.11□□□□□ -1.27
NUP88-202ENST00000570937 DAB2P98082 770 aa7.11□□□□□ -1.27
NUP88-202ENST00000570937 CLEC10AQ8IUN9 316 aa7.11□□□□□ -1.27
NUP88-202ENST00000570937 RNF19AQ9NV58 838 aa7.11□□□□□ -1.27
NUP88-202ENST00000570937 GAS2O43903 313 aaKnown RBP7.1□□□□□ -1.27
NUP88-202ENST00000570937 AOC2O75106 756 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 ADH5P11766 374 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 BMP3P12645 472 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 DRD2P14416 443 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 ARNTP27540 789 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 SULF2Q8IWU5 870 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 C2CD4AQ8NCU7 369 aaPredicted RBP7.1□□□□□ -1.27
NUP88-202ENST00000570937 FAM83CQ9BQN1 747 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 WDR18Q9BV38 432 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms