RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
TCF4-245ENST00000570177 ALDH8A1Q9H2A2 487 aaPredicted RBP11.72□□□□□ -0.53
TCF4-245ENST00000570177 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
TCF4-245ENST00000570177 LARGE1O95461 756 aa11.71□□□□□ -0.53
TCF4-245ENST00000570177 FGAP02671 866 aa11.71□□□□□ -0.53
TCF4-245ENST00000570177 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.53
TCF4-245ENST00000570177 IRX3P78415 501 aaPredicted RBP11.71□□□□□ -0.53
TCF4-245ENST00000570177 MSL1Q68DK7 614 aa11.71□□□□□ -0.53
TCF4-245ENST00000570177 RPGRQ92834 1020 aaKnown RBP11.71□□□□□ -0.53
TCF4-245ENST00000570177 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.53
TCF4-245ENST00000570177 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■■■■■ 33.9
TCF4-245ENST00000570177 BBOX1O75936 387 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 SRGNP10124 158 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 RPS6KB1P23443 525 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 RNF20Q5VTR2 975 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 DEFB132Q7Z7B7 95 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 ADGRA1Q86SQ6 560 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 MAGEB6Q8N7X4 407 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 RBM17Q96I25 401 aaKnown RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 PDGFDQ9GZP0 370 aaPredicted RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 PDRG1Q9NUG6 133 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 CYP46A1Q9Y6A2 500 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 PDS5AQ29RF7 1337 aaKnown RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 FRAT2O75474 233 aaPredicted RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 HIBADHP31937 336 aaKnown RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 EXOSC10Q01780 885 aaKnown RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 RAB3GAP1Q15042 981 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 CAVIN4Q5BKX8 364 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 TCEANC2Q96MN5 208 aa11.7□□□□□ -0.54
TCF4-245ENST00000570177 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
TCF4-245ENST00000570177 XDHP47989 1333 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 LTBP1Q14766 1721 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 CACNA1SQ13698 1873 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 SEMA3EO15041 775 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 PTMSP20962 102 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 PSMA5P28066 241 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 MAP3K12Q12852 859 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 PKP1Q13835 747 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
TCF4-245ENST00000570177 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
TCF4-245ENST00000570177 DENND2AQ9ULE3 1009 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 LIMCH1Q9UPQ0 1083 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 ZDHHC9Q9Y397 364 aa11.69□□□□□ -0.54
TCF4-245ENST00000570177 KRT32Q14532 448 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 ALX1Q15699 326 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 TDRD7Q8NHU6 1098 aaKnown RBP11.68□□□□□ -0.54
TCF4-245ENST00000570177 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 EPB41L4AQ9HCS5 686 aaPredicted RBP11.68□□□□□ -0.54
TCF4-245ENST00000570177 POLLQ9UGP5 575 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 TPCN1Q9ULQ1 816 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 E7EWF7 191 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 ME3Q16798 604 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
TCF4-245ENST00000570177 ANKIB1Q9P2G1 1089 aa11.68□□□□□ -0.54
TCF4-245ENST00000570177 QSER1Q2KHR3 1735 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 PRKAB2O43741 272 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 CLSTN1O94985 981 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 MBD4O95243 580 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 TBC1D16Q8TBP0 767 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 RIOK1Q9BRS2 568 aaKnown RBP11.67□□□□□ -0.54
TCF4-245ENST00000570177 AGXT2Q9BYV1 514 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 LRP2BPQ9P2M1 347 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 KCNG1Q9UIX4 513 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.67□□□□□ -0.54
TCF4-245ENST00000570177 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
TCF4-245ENST00000570177 COL11A2P13942 1736 aaPredicted RBP11.67□□□□□ -0.54
TCF4-245ENST00000570177 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
TCF4-245ENST00000570177 NPR1P16066 1061 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 ATP2B4P23634 1241 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 GRIK5Q16478 980 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 VPS37DQ86XT2 251 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 TNPO1Q92973 898 aaKnown RBP11.66□□□□□ -0.54
TCF4-245ENST00000570177 GTPBP4Q9BZE4 634 aaKnown RBP11.66□□□□□ -0.54
TCF4-245ENST00000570177 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 NSFL1CQ9UNZ2 370 aaKnown RBP11.66□□□□□ -0.54
TCF4-245ENST00000570177 ATP6V0A2Q9Y487 856 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 CYP7A1P22680 504 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 HAND2P61296 217 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 CLEC17AQ6ZS10 378 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 NSUN4Q96CB9 384 aaKnown RBP11.66□□□□□ -0.54
TCF4-245ENST00000570177 CTNNA3Q9UI47 895 aa11.66□□□□□ -0.54
TCF4-245ENST00000570177 LAMA4Q16363 1823 aa11.65□□□□□ -0.54
TCF4-245ENST00000570177 GOLGA6L3A6NEY3 463 aa11.65□□□□□ -0.54
TCF4-245ENST00000570177 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms