RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 FKBP1AP62942 108 aaKnown RBP15.28■□□□□ 0.04
CAPN3-220ENST00000569827 WDR63Q8IWG1 891 aa15.28■□□□□ 0.04
CAPN3-220ENST00000569827 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
CAPN3-220ENST00000569827 ANKRD13AQ8IZ07 590 aa15.28■□□□□ 0.04
CAPN3-220ENST00000569827 TEPSINQ96N21 525 aa15.28■□□□□ 0.04
CAPN3-220ENST00000569827 PTPN22Q9Y2R2 807 aa15.28■□□□□ 0.04
CAPN3-220ENST00000569827 MYCP01106 439 aaPredicted RBP15.27■□□□□ 0.04
CAPN3-220ENST00000569827 CRKP46108 304 aa15.27■□□□□ 0.04
CAPN3-220ENST00000569827 INHBEP58166 350 aa15.27■□□□□ 0.04
CAPN3-220ENST00000569827 VGLL4Q14135 290 aa15.27■□□□□ 0.04
CAPN3-220ENST00000569827 LRRC24Q50LG9 513 aa15.27■□□□□ 0.04
CAPN3-220ENST00000569827 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.27■□□□□ 0.04
CAPN3-220ENST00000569827 KLHDC4Q8TBB5 520 aa15.27■□□□□ 0.04
CAPN3-220ENST00000569827 BRI3BPQ8WY22 251 aa15.27■□□□□ 0.04
CAPN3-220ENST00000569827 ERO1AQ96HE7 468 aa15.27■□□□□ 0.04
CAPN3-220ENST00000569827 MGAMO43451 1857 aa15.27■□□□□ 0.03
CAPN3-220ENST00000569827 MYH2Q9UKX2 1941 aa15.26■□□□□ 0.03
CAPN3-220ENST00000569827 EN2P19622 333 aaPredicted RBP15.26■□□□□ 0.03
CAPN3-220ENST00000569827 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
CAPN3-220ENST00000569827 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
CAPN3-220ENST00000569827 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
CAPN3-220ENST00000569827 BICC1Q9H694 974 aaKnown RBP15.26■□□□□ 0.03
CAPN3-220ENST00000569827 EFCC1Q9HA90 598 aa15.26■□□□□ 0.03
CAPN3-220ENST00000569827 TRIOBPQ9H2D6 2365 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 CCL15-CCL14A0A0B4J2E2 113 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 SP3Q02447 781 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 TNFAIP1Q13829 316 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 CCL15Q16663 113 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 FAM9BQ8IZU0 186 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 FAM43AQ8N2R8 423 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 PCDH10Q9P2E7 1040 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 SERPINA10Q9UK55 444 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
CAPN3-220ENST00000569827 DOCK2Q92608 1830 aa15.24■□□□□ 0.03
CAPN3-220ENST00000569827 ALDH1L1O75891 902 aa15.24■□□□□ 0.03
CAPN3-220ENST00000569827 TAF1CQ15572 869 aaPredicted RBP15.24■□□□□ 0.03
CAPN3-220ENST00000569827 OTUD7BQ6GQQ9 843 aa15.24■□□□□ 0.03
CAPN3-220ENST00000569827 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
CAPN3-220ENST00000569827 TESPA1A2RU30 521 aaPredicted RBP15.23■□□□□ 0.03
CAPN3-220ENST00000569827 METTL24Q5JXM2 366 aa15.23■□□□□ 0.03
CAPN3-220ENST00000569827 VPS37DQ86XT2 251 aa15.23■□□□□ 0.03
CAPN3-220ENST00000569827 ANKRD44Q8N8A2 993 aa15.23■□□□□ 0.03
CAPN3-220ENST00000569827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.23■□□□□ 0.03
CAPN3-220ENST00000569827 ARHGAP39Q9C0H5 1083 aa15.23■□□□□ 0.03
CAPN3-220ENST00000569827 PTPRFP10586 1907 aa15.23■□□□□ 0.03
CAPN3-220ENST00000569827 FRAT2O75474 233 aaPredicted RBP15.22■□□□□ 0.03
CAPN3-220ENST00000569827 BCAMP50895 628 aa15.22■□□□□ 0.03
CAPN3-220ENST00000569827 MAP3K9P80192 1104 aa15.22■□□□□ 0.03
CAPN3-220ENST00000569827 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
CAPN3-220ENST00000569827 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
CAPN3-220ENST00000569827 CSADQ9Y600 493 aa15.22■□□□□ 0.03
CAPN3-220ENST00000569827 DOCK3Q8IZD9 2030 aa15.22■□□□□ 0.03
CAPN3-220ENST00000569827 MROH5Q6ZUA9 1318 aa15.21■□□□□ 0.03
CAPN3-220ENST00000569827 ANP32CO43423 234 aa15.21■□□□□ 0.03
CAPN3-220ENST00000569827 TNNI2P48788 182 aa15.21■□□□□ 0.03
CAPN3-220ENST00000569827 VGLL2Q8N8G2 317 aa15.21■□□□□ 0.03
CAPN3-220ENST00000569827 ZKSCAN4Q969J2 545 aaPredicted RBP15.21■□□□□ 0.03
CAPN3-220ENST00000569827 ARMC5Q96C12 935 aa15.21■□□□□ 0.03
CAPN3-220ENST00000569827 WRNIP1Q96S55 665 aa15.21■□□□□ 0.03
CAPN3-220ENST00000569827 SNCAIPQ9Y6H5 919 aa15.21■□□□□ 0.03
CAPN3-220ENST00000569827 UNCXA6NJT0 531 aa15.2■□□□□ 0.02
CAPN3-220ENST00000569827 GTF2A2P52657 109 aa15.2■□□□□ 0.02
CAPN3-220ENST00000569827 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
CAPN3-220ENST00000569827 MIGA2Q7L4E1 593 aa15.2■□□□□ 0.02
CAPN3-220ENST00000569827 SH3TC2Q8TF17 1288 aa15.2■□□□□ 0.02
CAPN3-220ENST00000569827 TEKT1Q969V4 418 aa15.2■□□□□ 0.02
CAPN3-220ENST00000569827 ZNF333Q96JL9 665 aa15.2■□□□□ 0.02
CAPN3-220ENST00000569827 ZFYVE28Q9HCC9 887 aa15.2■□□□□ 0.02
CAPN3-220ENST00000569827 UTYO14607 1347 aa15.19■□□□□ 0.02
CAPN3-220ENST00000569827 RABL6Q3YEC7 729 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-220ENST00000569827 SLC9C1Q4G0N8 1177 aa15.19■□□□□ 0.02
CAPN3-220ENST00000569827 HABP4Q5JVS0 413 aaKnown RBP15.19■□□□□ 0.02
CAPN3-220ENST00000569827 MRPL50Q8N5N7 158 aaKnown RBP15.19■□□□□ 0.02
CAPN3-220ENST00000569827 SZT2Q5T011 3432 aa15.19■□□□□ 0.02
CAPN3-220ENST00000569827 PHIPQ8WWQ0 1821 aa15.18■□□□□ 0.02
CAPN3-220ENST00000569827 SPDYE5A6NIY4 337 aa15.18■□□□□ 0.02
CAPN3-220ENST00000569827 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
CAPN3-220ENST00000569827 IRF6O14896 467 aa15.18■□□□□ 0.02
CAPN3-220ENST00000569827 CAVIN4Q5BKX8 364 aa15.18■□□□□ 0.02
CAPN3-220ENST00000569827 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
CAPN3-220ENST00000569827 PDE8BO95263 885 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 INPP5BP32019 993 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 TCP10Q12799 353 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 DIXDC1Q155Q3 683 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 SLC4A8Q2Y0W8 1093 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
CAPN3-220ENST00000569827 TMEM106CQ9BVX2 250 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 TMOD2Q9NZR1 351 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 ATAD5Q96QE3 1844 aa15.17■□□□□ 0.02
CAPN3-220ENST00000569827 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
CAPN3-220ENST00000569827 CTGFP29279 349 aa15.16■□□□□ 0.02
CAPN3-220ENST00000569827 ERO1BQ86YB8 467 aa15.16■□□□□ 0.02
CAPN3-220ENST00000569827 TBC1D22AQ8WUA7 517 aa15.16■□□□□ 0.02
CAPN3-220ENST00000569827 ZDHHC15Q96MV8 337 aa15.16■□□□□ 0.02
CAPN3-220ENST00000569827 CPA4Q9UI42 421 aa15.16■□□□□ 0.02
CAPN3-220ENST00000569827 RANBP2P49792 3224 aaKnown RBP15.16■□□□□ 0.02
CAPN3-220ENST00000569827 FGFR2P21802 821 aa15.15■□□□□ 0.02
CAPN3-220ENST00000569827 LACTBP83111 547 aaPredicted RBP15.15■□□□□ 0.02
CAPN3-220ENST00000569827 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms