RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
SPG7-221ENST00000569720 TDRD3Q9H7E2 651 aaKnown RBP16.45■□□□□ 0.22
SPG7-221ENST00000569720 IQSEC3Q9UPP2 1182 aaPredicted RBP16.45■□□□□ 0.22
SPG7-221ENST00000569720 AOX1Q06278 1338 aa16.45■□□□□ 0.22
SPG7-221ENST00000569720 USP2O75604 605 aaPredicted RBP16.44■□□□□ 0.22
SPG7-221ENST00000569720 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
SPG7-221ENST00000569720 SOX10P56693 466 aa16.44■□□□□ 0.22
SPG7-221ENST00000569720 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
SPG7-221ENST00000569720 OTUD7BQ6GQQ9 843 aa16.44■□□□□ 0.22
SPG7-221ENST00000569720 IFNL1Q8IU54 200 aa16.44■□□□□ 0.22
SPG7-221ENST00000569720 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
SPG7-221ENST00000569720 SMC4Q9NTJ3 1288 aa16.44■□□□□ 0.22
SPG7-221ENST00000569720 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
SPG7-221ENST00000569720 VGLL2Q8N8G2 317 aa16.43■□□□□ 0.22
SPG7-221ENST00000569720 OTOFQ9HC10 1997 aa16.43■□□□□ 0.22
SPG7-221ENST00000569720 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
SPG7-221ENST00000569720 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
SPG7-221ENST00000569720 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
SPG7-221ENST00000569720 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
SPG7-221ENST00000569720 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
SPG7-221ENST00000569720 MAST3O60307 1309 aa16.42■□□□□ 0.22
SPG7-221ENST00000569720 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
SPG7-221ENST00000569720 BCAMP50895 628 aa16.41■□□□□ 0.22
SPG7-221ENST00000569720 R3HDMLQ9H3Y0 253 aa16.41■□□□□ 0.22
SPG7-221ENST00000569720 TMOD2Q9NZR1 351 aa16.41■□□□□ 0.22
SPG7-221ENST00000569720 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
SPG7-221ENST00000569720 PDE4DIPQ5VU43 2346 aa16.41■□□□□ 0.22
SPG7-221ENST00000569720 TNRC18O15417 2968 aaPredicted RBP16.41■□□□□ 0.22
SPG7-221ENST00000569720 EYA2O00167 538 aa16.4■□□□□ 0.22
SPG7-221ENST00000569720 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
SPG7-221ENST00000569720 SLC5A1P13866 664 aa16.4■□□□□ 0.22
SPG7-221ENST00000569720 CDCA7LQ96GN5 454 aa16.4■□□□□ 0.22
SPG7-221ENST00000569720 MRIQ9BWK5 157 aa16.4■□□□□ 0.22
SPG7-221ENST00000569720 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
SPG7-221ENST00000569720 ELP3Q9H9T3 547 aa16.4■□□□□ 0.22
SPG7-221ENST00000569720 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
SPG7-221ENST00000569720 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
SPG7-221ENST00000569720 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
SPG7-221ENST00000569720 FGFR2P21802 821 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 GRIK5Q16478 980 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 LPIN2Q92539 896 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 HOOK2Q96ED9 719 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 TEPSINQ96N21 525 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 CSADQ9Y600 493 aa16.39■□□□□ 0.21
SPG7-221ENST00000569720 GJA5P36382 358 aa16.38■□□□□ 0.21
SPG7-221ENST00000569720 RFX5P48382 616 aaPredicted RBP16.38■□□□□ 0.21
SPG7-221ENST00000569720 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
SPG7-221ENST00000569720 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
SPG7-221ENST00000569720 API5Q9BZZ5 524 aaKnown RBP16.38■□□□□ 0.21
SPG7-221ENST00000569720 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
SPG7-221ENST00000569720 TESPA1A2RU30 521 aaPredicted RBP16.37■□□□□ 0.21
SPG7-221ENST00000569720 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
SPG7-221ENST00000569720 HHIPL2Q6UWX4 724 aa16.37■□□□□ 0.21
SPG7-221ENST00000569720 FAM83AQ86UY5 434 aa16.37■□□□□ 0.21
SPG7-221ENST00000569720 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
SPG7-221ENST00000569720 ERO1AQ96HE7 468 aa16.37■□□□□ 0.21
SPG7-221ENST00000569720 AK9Q5TCS8 1911 aa16.37■□□□□ 0.21
SPG7-221ENST00000569720 GTF2A2P52657 109 aa16.36■□□□□ 0.21
SPG7-221ENST00000569720 CACNB3P54284 484 aa16.36■□□□□ 0.21
SPG7-221ENST00000569720 CRHR2Q13324 411 aa16.36■□□□□ 0.21
SPG7-221ENST00000569720 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.36■□□□□ 0.21
SPG7-221ENST00000569720 CDAN1Q8IWY9 1227 aa16.36■□□□□ 0.21
SPG7-221ENST00000569720 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
SPG7-221ENST00000569720 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
SPG7-221ENST00000569720 NOB1Q9ULX3 412 aaKnown RBP16.36■□□□□ 0.21
SPG7-221ENST00000569720 TRIM17Q9Y577 477 aa16.36■□□□□ 0.21
SPG7-221ENST00000569720 CIAO1O76071 339 aa16.35■□□□□ 0.21
SPG7-221ENST00000569720 VGLL4Q14135 290 aa16.35■□□□□ 0.21
SPG7-221ENST00000569720 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
SPG7-221ENST00000569720 APOBEC3HQ6NTF7 200 aaKnown RBP16.35■□□□□ 0.21
SPG7-221ENST00000569720 OTOP1Q7RTM1 612 aa16.35■□□□□ 0.21
SPG7-221ENST00000569720 ATG9AQ7Z3C6 839 aa16.35■□□□□ 0.21
SPG7-221ENST00000569720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPG7-221ENST00000569720 SIL1Q9H173 461 aa16.35■□□□□ 0.21
SPG7-221ENST00000569720 CCL15-CCL14A0A0B4J2E2 113 aa16.34■□□□□ 0.21
SPG7-221ENST00000569720 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
SPG7-221ENST00000569720 SP3Q02447 781 aa16.34■□□□□ 0.21
SPG7-221ENST00000569720 CCL15Q16663 113 aa16.34■□□□□ 0.21
SPG7-221ENST00000569720 DCAF15Q66K64 600 aa16.34■□□□□ 0.21
SPG7-221ENST00000569720 OTUD5Q96G74 571 aa16.34■□□□□ 0.21
SPG7-221ENST00000569720 PTPN18Q99952 460 aa16.34■□□□□ 0.21
SPG7-221ENST00000569720 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.2
SPG7-221ENST00000569720 ARHGEF6Q15052 776 aa16.33■□□□□ 0.2
SPG7-221ENST00000569720 TAF1CQ15572 869 aaPredicted RBP16.33■□□□□ 0.2
SPG7-221ENST00000569720 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.2
SPG7-221ENST00000569720 MS4A4AQ96JQ5 239 aa16.33■□□□□ 0.2
SPG7-221ENST00000569720 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
SPG7-221ENST00000569720 ZFYVE28Q9HCC9 887 aa16.33■□□□□ 0.2
SPG7-221ENST00000569720 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
SPG7-221ENST00000569720 RPAP1Q9BWH6 1393 aaPredicted RBP16.33■□□□□ 0.2
SPG7-221ENST00000569720 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
SPG7-221ENST00000569720 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
SPG7-221ENST00000569720 INTS3Q68E01 1043 aaKnown RBP16.32■□□□□ 0.2
SPG7-221ENST00000569720 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
SPG7-221ENST00000569720 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
SPG7-221ENST00000569720 BRI3BPQ8WY22 251 aa16.32■□□□□ 0.2
SPG7-221ENST00000569720 WRNIP1Q96S55 665 aa16.32■□□□□ 0.2
SPG7-221ENST00000569720 DENND2AQ9ULE3 1009 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms