RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 BTG4Q9NY30 223 aa23.55■■□□□ 1.36
SCRT1-201ENST00000569446 SMTNL1A8MU46 457 aa23.55■■□□□ 1.36
SCRT1-201ENST00000569446 LRRC8AQ8IWT6 810 aa23.55■■□□□ 1.36
SCRT1-201ENST00000569446 DIP2BQ9P265 1576 aa23.55■■□□□ 1.36
SCRT1-201ENST00000569446 PFKFB1P16118 471 aa23.54■■□□□ 1.36
SCRT1-201ENST00000569446 DZIP3Q86Y13 1208 aaKnown RBP23.54■■□□□ 1.36
SCRT1-201ENST00000569446 DHX58Q96C10 678 aa23.54■■□□□ 1.36
SCRT1-201ENST00000569446 MAPK8IP1Q9UQF2 711 aa23.54■■□□□ 1.36
SCRT1-201ENST00000569446 HLFQ16534 295 aa23.54■■□□□ 1.36
SCRT1-201ENST00000569446 GRAMD1CQ8IYS0 662 aa23.54■■□□□ 1.36
SCRT1-201ENST00000569446 GNG11P61952 73 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 EEF2KMTQ96G04 330 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 PLIN2Q99541 437 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 PRKAB2O43741 272 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 IGHMBP2P38935 993 aaKnown RBP23.53■■□□□ 1.36
SCRT1-201ENST00000569446 NAA16Q6N069 864 aaPredicted RBP23.53■■□□□ 1.36
SCRT1-201ENST00000569446 DSCC1Q9BVC3 393 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 ANGEL1Q9UNK9 670 aaKnown RBP23.53■■□□□ 1.36
SCRT1-201ENST00000569446 CYP7A1P22680 504 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 CABP5Q9NP86 173 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 KIAA1468Q9P260 1216 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 CARMIL3Q8ND23 1372 aa23.53■■□□□ 1.36
SCRT1-201ENST00000569446 TCHHQ07283 1943 aa23.52■■□□□ 1.36
SCRT1-201ENST00000569446 BTBD18B2RXH4 712 aa23.52■■□□□ 1.36
SCRT1-201ENST00000569446 TCIRG1Q13488 830 aa23.52■■□□□ 1.36
SCRT1-201ENST00000569446 ATG9AQ7Z3C6 839 aa23.52■■□□□ 1.36
SCRT1-201ENST00000569446 WWC3Q9ULE0 1092 aa23.52■■□□□ 1.36
SCRT1-201ENST00000569446 CTDNEP1O95476 244 aa23.52■■□□□ 1.36
SCRT1-201ENST00000569446 WTAPQ15007 396 aa23.52■■□□□ 1.36
SCRT1-201ENST00000569446 POLR2DO15514 142 aaKnown RBP23.51■■□□□ 1.35
SCRT1-201ENST00000569446 FBXO18Q8NFZ0 1043 aa23.51■■□□□ 1.35
SCRT1-201ENST00000569446 SDR42E1Q8WUS8 393 aa23.51■■□□□ 1.35
SCRT1-201ENST00000569446 ELP1O95163 1332 aa23.51■■□□□ 1.35
SCRT1-201ENST00000569446 ZFYP08048 801 aaPredicted RBP23.51■■□□□ 1.35
SCRT1-201ENST00000569446 CGNQ9P2M7 1197 aaKnown RBP23.51■■□□□ 1.35
SCRT1-201ENST00000569446 SPATA31D1Q6ZQQ2 1576 aa23.51■■□□□ 1.35
SCRT1-201ENST00000569446 TMEM94Q12767 1356 aa23.51■■□□□ 1.35
SCRT1-201ENST00000569446 LLPHQ9BRT6 129 aaKnown RBP23.51■■□□□ 1.35
SCRT1-201ENST00000569446 TERF1P54274 439 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 FOXO4P98177 505 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 FANCCQ00597 558 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 SENP2Q9HC62 589 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 RFX5P48382 616 aaPredicted RBP23.5■■□□□ 1.35
SCRT1-201ENST00000569446 LZTFL1Q9NQ48 299 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 RCOR1Q9UKL0 485 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 SLC5A1P13866 664 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 ERCC6LQ2NKX8 1250 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 SMIM5Q71RC9 77 aa23.5■■□□□ 1.35
SCRT1-201ENST00000569446 BCAMP50895 628 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 TDRD7Q8NHU6 1098 aaKnown RBP23.49■■□□□ 1.35
SCRT1-201ENST00000569446 SEC31BQ9NQW1 1179 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 DIP2AQ14689 1571 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 EXOC5O00471 708 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 RTN1Q16799 776 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 PAXBP1Q9Y5B6 917 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 PCDH11XQ9BZA7 1347 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 PCDH11YQ9BZA8 1340 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 SAMD1Q6SPF0 538 aaPredicted RBP23.49■■□□□ 1.35
SCRT1-201ENST00000569446 PPFIBP1Q86W92 1011 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 DIS3L2Q8IYB7 885 aaKnown RBP23.49■■□□□ 1.35
SCRT1-201ENST00000569446 NIP7Q9Y221 180 aaKnown RBP eCLIP23.49■■□□□ 1.35
SCRT1-201ENST00000569446 ZBTB1Q9Y2K1 713 aa23.49■■□□□ 1.35
SCRT1-201ENST00000569446 XBP1P17861 261 aa23.48■■□□□ 1.35
SCRT1-201ENST00000569446 ADKP55263 362 aaKnown RBP23.48■■□□□ 1.35
SCRT1-201ENST00000569446 ADALQ6DHV7 355 aa23.48■■□□□ 1.35
SCRT1-201ENST00000569446 FUCA2Q9BTY2 467 aa23.48■■□□□ 1.35
SCRT1-201ENST00000569446 H7C1W4 665 aa23.48■■□□□ 1.35
SCRT1-201ENST00000569446 ARHGAP29Q52LW3 1261 aa23.48■■□□□ 1.35
SCRT1-201ENST00000569446 USP42Q9H9J4 1324 aaKnown RBP23.48■■□□□ 1.35
SCRT1-201ENST00000569446 MCAMP43121 646 aa23.47■■□□□ 1.35
SCRT1-201ENST00000569446 LINC00301Q8NCQ3 95 aa23.47■■□□□ 1.35
SCRT1-201ENST00000569446 DESI2Q9BSY9 194 aa23.47■■□□□ 1.35
SCRT1-201ENST00000569446 TPM1P09493 284 aa23.47■■□□□ 1.35
SCRT1-201ENST00000569446 GSDMDP57764 484 aa23.47■■□□□ 1.35
SCRT1-201ENST00000569446 FANCLQ9NW38 375 aa23.47■■□□□ 1.35
SCRT1-201ENST00000569446 KCNH3Q9ULD8 1083 aa23.47■■□□□ 1.35
SCRT1-201ENST00000569446 KIF28PB7ZC32 967 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 NR5A1Q13285 461 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 SMARCE1Q969G3 411 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 ZNF274Q96GC6 653 aaPredicted RBP23.46■■□□□ 1.35
SCRT1-201ENST00000569446 MARCH6O60337 910 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 PDE6AP16499 860 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 ERCC3P19447 782 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 CASP1P29466 404 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 ZNF710Q8N1W2 664 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 ATP6V1AP38606 617 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 ZNF174Q15697 407 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 PIH1D3Q9NQM4 214 aaKnown RBP23.46■■□□□ 1.35
SCRT1-201ENST00000569446 ITSN1Q15811 1721 aa23.46■■□□□ 1.35
SCRT1-201ENST00000569446 LONRF3Q496Y0 759 aa23.45■■□□□ 1.35
SCRT1-201ENST00000569446 VPS54Q9P1Q0 977 aa23.45■■□□□ 1.35
SCRT1-201ENST00000569446 CAVIN2O95810 425 aa23.45■■□□□ 1.34
SCRT1-201ENST00000569446 MED23Q9ULK4 1368 aa23.45■■□□□ 1.34
SCRT1-201ENST00000569446 CYP2D7A0A087X1C5 515 aa23.45■■□□□ 1.34
SCRT1-201ENST00000569446 ARGLU1Q9NWB6 273 aaPredicted RBP23.45■■□□□ 1.34
SCRT1-201ENST00000569446 FOXN1O15353 648 aa23.44■■□□□ 1.34
SCRT1-201ENST00000569446 SLU7O95391 586 aaKnown RBP23.44■■□□□ 1.34
SCRT1-201ENST00000569446 VAT1LQ9HCJ6 419 aa23.44■■□□□ 1.34
SCRT1-201ENST00000569446 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.44■■□□□ 1.34
SCRT1-201ENST00000569446 CCT6AP40227 531 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms