RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MAPK8P45983 427 aa10.87□□□□□ -0.67
CDH11-216ENST00000569128 KCNQ4P56696 695 aa10.87□□□□□ -0.67
CDH11-216ENST00000569128 FMR1Q06787 632 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDH11-216ENST00000569128 GRIN2CQ14957 1233 aa10.87□□□□□ -0.67
CDH11-216ENST00000569128 ZNF438Q7Z4V0 828 aa10.87□□□□□ -0.67
CDH11-216ENST00000569128 ALKBH8Q96BT7 664 aaKnown RBP10.87□□□□□ -0.67
CDH11-216ENST00000569128 STRCP1A6NGW2 1772 aa10.87□□□□□ -0.67
CDH11-216ENST00000569128 KNDC1Q76NI1 1749 aa10.87□□□□□ -0.67
CDH11-216ENST00000569128 KIF7Q2M1P5 1343 aa10.86□□□□□ -0.67
CDH11-216ENST00000569128 QRICH2Q9H0J4 1663 aa10.86□□□□□ -0.67
CDH11-216ENST00000569128 CPS1P31327 1500 aa10.86□□□□□ -0.67
CDH11-216ENST00000569128 CD33P20138 364 aa10.86□□□□□ -0.67
CDH11-216ENST00000569128 TAGLNQ01995 201 aaKnown RBP10.86□□□□□ -0.67
CDH11-216ENST00000569128 EAPPQ56P03 285 aaPredicted RBP10.86□□□□□ -0.67
CDH11-216ENST00000569128 FBXO33Q7Z6M2 555 aa10.86□□□□□ -0.67
CDH11-216ENST00000569128 DRC1Q96MC2 740 aa10.86□□□□□ -0.67
CDH11-216ENST00000569128 FAM135BQ49AJ0 1406 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.85□□□□□ -0.67
CDH11-216ENST00000569128 VEGFBP49765 207 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 TMF1P82094 1093 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 ORC1Q13415 861 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 LAMC2Q13753 1193 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 COL19A1Q14993 1142 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 SREK1Q8WXA9 508 aaKnown RBP10.85□□□□□ -0.67
CDH11-216ENST00000569128 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 MARK1Q9P0L2 795 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 ATXN7L1Q9ULK2 861 aaPredicted RBP10.85□□□□□ -0.67
CDH11-216ENST00000569128 CCDC7Q96M83 1385 aa10.85□□□□□ -0.67
CDH11-216ENST00000569128 SASH3O75995 380 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 PDE12Q6L8Q7 609 aaKnown RBP10.84□□□□□ -0.67
CDH11-216ENST00000569128 FOXR1Q6PIV2 292 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 CDK19Q9BWU1 502 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 TMEM63CQ9P1W3 806 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 FOXD3Q9UJU5 478 aaPredicted RBP10.84□□□□□ -0.67
CDH11-216ENST00000569128 NWD1Q149M9 1564 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 TULP4Q9NRJ4 1543 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
CDH11-216ENST00000569128 TNFRSF21O75509 655 aa10.83□□□□□ -0.68
CDH11-216ENST00000569128 EGFRP00533 1210 aa10.83□□□□□ -0.68
CDH11-216ENST00000569128 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
CDH11-216ENST00000569128 CCINQ13939 588 aa10.83□□□□□ -0.68
CDH11-216ENST00000569128 XKR5Q6UX68 686 aa10.83□□□□□ -0.68
CDH11-216ENST00000569128 TRERF1Q96PN7 1200 aa10.83□□□□□ -0.68
CDH11-216ENST00000569128 GSX2Q9BZM3 304 aa10.83□□□□□ -0.68
CDH11-216ENST00000569128 PHF24Q9UPV7 400 aa10.83□□□□□ -0.68
CDH11-216ENST00000569128 SBNO2Q9Y2G9 1366 aa10.82□□□□□ -0.68
CDH11-216ENST00000569128 FGFR3P22607 806 aa10.82□□□□□ -0.68
CDH11-216ENST00000569128 ZC3H6P61129 1189 aaKnown RBP10.82□□□□□ -0.68
CDH11-216ENST00000569128 NLRP13Q86W25 1043 aa10.82□□□□□ -0.68
CDH11-216ENST00000569128 NANOS1Q8WY41 292 aaKnown RBP10.82□□□□□ -0.68
CDH11-216ENST00000569128 SLC30A3Q99726 388 aa10.82□□□□□ -0.68
CDH11-216ENST00000569128 CFHR5Q9BXR6 569 aa10.82□□□□□ -0.68
CDH11-216ENST00000569128 C11orf16Q9NQ32 467 aa10.82□□□□□ -0.68
CDH11-216ENST00000569128 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
CDH11-216ENST00000569128 EVC2Q86UK5 1308 aa10.82□□□□□ -0.68
CDH11-216ENST00000569128 PNMA6FA0A0J9YX94 578 aa10.81□□□□□ -0.68
CDH11-216ENST00000569128 TARSP26639 723 aaKnown RBP10.81□□□□□ -0.68
CDH11-216ENST00000569128 SPEM2Q0P670 501 aa10.81□□□□□ -0.68
CDH11-216ENST00000569128 RAB44Q7Z6P3 723 aaPredicted RBP10.81□□□□□ -0.68
CDH11-216ENST00000569128 CSRNP1Q96S65 589 aa10.81□□□□□ -0.68
CDH11-216ENST00000569128 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
CDH11-216ENST00000569128 BCL11AQ9H165 835 aa10.81□□□□□ -0.68
CDH11-216ENST00000569128 WWC3Q9ULE0 1092 aa10.81□□□□□ -0.68
CDH11-216ENST00000569128 TMEM94Q12767 1356 aa10.8□□□□□ -0.68
CDH11-216ENST00000569128 EIF1AYO14602 144 aaKnown RBP10.8□□□□□ -0.68
CDH11-216ENST00000569128 LDHBP07195 334 aaKnown RBP10.8□□□□□ -0.68
CDH11-216ENST00000569128 NEFLP07196 543 aa10.8□□□□□ -0.68
CDH11-216ENST00000569128 CTBSQ01459 385 aa10.8□□□□□ -0.68
CDH11-216ENST00000569128 ENOX2Q16206 610 aaKnown RBP10.8□□□□□ -0.68
CDH11-216ENST00000569128 SNX29Q8TEQ0 813 aa10.8□□□□□ -0.68
CDH11-216ENST00000569128 PHACTR2O75167 634 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 ZNF787Q6DD87 383 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 PNMA5Q96PV4 448 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 SLC12A5Q9H2X9 1139 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 ABI2Q9NYB9 513 aaPredicted RBP10.79□□□□□ -0.68
CDH11-216ENST00000569128 CNTN3Q9P232 1028 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 NKTRP30414 1462 aaKnown RBP10.79□□□□□ -0.68
CDH11-216ENST00000569128 PRR36Q9H6K5 1346 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 LRRC7Q96NW7 1537 aa10.79□□□□□ -0.68
CDH11-216ENST00000569128 RECKO95980 971 aa10.78□□□□□ -0.68
CDH11-216ENST00000569128 RARAP10276 462 aa10.78□□□□□ -0.68
CDH11-216ENST00000569128 NFKB1P19838 968 aa10.78□□□□□ -0.68
CDH11-216ENST00000569128 CANXP27824 592 aaKnown RBP10.78□□□□□ -0.68
CDH11-216ENST00000569128 ATP2B2Q01814 1243 aa10.78□□□□□ -0.68
CDH11-216ENST00000569128 TTC39BQ5VTQ0 682 aaPredicted RBP10.78□□□□□ -0.68
CDH11-216ENST00000569128 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
CDH11-216ENST00000569128 BHMTQ93088 406 aa10.78□□□□□ -0.68
CDH11-216ENST00000569128 NALCNQ8IZF0 1738 aa10.78□□□□□ -0.68
CDH11-216ENST00000569128 MMP20O60882 483 aa10.77□□□□□ -0.69
CDH11-216ENST00000569128 CPNE3O75131 537 aaKnown RBP10.77□□□□□ -0.69
CDH11-216ENST00000569128 C1orf127Q8N9H9 656 aa10.77□□□□□ -0.69
CDH11-216ENST00000569128 ZFYVE28Q9HCC9 887 aa10.77□□□□□ -0.69
CDH11-216ENST00000569128 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.77□□□□□ -0.69
CDH11-216ENST00000569128 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
CDH11-216ENST00000569128 ADGRL3Q9HAR2 1447 aa10.76□□□□□ -0.69
CDH11-216ENST00000569128 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
CDH11-216ENST00000569128 DNAJC25Q9H1X3 360 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms