RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SCHIP1Q9P0W5 487 aaPredicted RBP7.9□□□□□ -1.14
CDH13-211ENST00000568770 RBM19Q9Y4C8 960 aaKnown RBP7.9□□□□□ -1.14
CDH13-211ENST00000568770 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 COL5A3P25940 1745 aaPredicted RBP7.89□□□□□ -1.15
CDH13-211ENST00000568770 TNRC6CQ9HCJ0 1690 aaKnown RBP7.89□□□□□ -1.15
CDH13-211ENST00000568770 SMG6Q86US8 1419 aaKnown RBP7.89□□□□□ -1.15
CDH13-211ENST00000568770 TTLL8A6PVC2 850 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 CYP27B1O15528 508 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 PRMT3O60678 531 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 SSFA2P28290 1259 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 SCNN1AP37088 669 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 PRICKLE2Q7Z3G6 844 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 ZNF295-AS1Q8N0V1 137 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 LINC00116Q8NCU8 138 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 SMARCC1Q92922 1105 aaPredicted RBP7.89□□□□□ -1.15
CDH13-211ENST00000568770 CARD11Q9BXL7 1154 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
CDH13-211ENST00000568770 A0A0G2JLW4 131 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 CDK2AP1O14519 115 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 MMP10P09238 476 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 OCLNQ16625 522 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 SWI5Q1ZZU3 235 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 ARHGAP27Q6ZUM4 889 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 PIGBQ92521 554 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 CLP1Q92989 425 aaKnown RBP7.88□□□□□ -1.15
CDH13-211ENST00000568770 KLRG1Q96E93 195 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 PUS7Q96PZ0 661 aaKnown RBP7.88□□□□□ -1.15
CDH13-211ENST00000568770 ZSCAN10Q96SZ4 725 aaPredicted RBP7.88□□□□□ -1.15
CDH13-211ENST00000568770 BCS1LQ9Y276 419 aa7.88□□□□□ -1.15
CDH13-211ENST00000568770 MYH14Q7Z406 1995 aaKnown RBP7.88□□□□□ -1.15
CDH13-211ENST00000568770 LOC102724428A0A0B4J2F2 783 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
CDH13-211ENST00000568770 WEE1P30291 646 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 GPC1P35052 558 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 SIK1P57059 783 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 TGFB2P61812 414 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 POU4F2Q12837 409 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 HSP90AB2PQ58FF8 381 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 HOMEZQ8IX15 550 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 C16orf71Q8IYS4 520 aaPredicted RBP7.87□□□□□ -1.15
CDH13-211ENST00000568770 JMYQ8N9B5 988 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 SCG3Q8WXD2 468 aaKnown RBP7.87□□□□□ -1.15
CDH13-211ENST00000568770 USTQ9Y2C2 406 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 PARP3Q9Y6F1 533 aa7.87□□□□□ -1.15
CDH13-211ENST00000568770 C10orf71Q711Q0 1435 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 ANKRD26Q9UPS8 1709 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 INSRP06213 1382 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 ZNF831Q5JPB2 1677 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 RHOQP17081 205 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 PRELPP51888 382 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 ITPK1Q13572 414 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 CAPN12Q6ZSI9 719 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 ZDHHC1Q8WTX9 485 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 GGNBP2Q9H3C7 697 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 ASAP1Q9ULH1 1129 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 KCPQ6ZWJ8 1503 aa7.86□□□□□ -1.15
CDH13-211ENST00000568770 FYB1O15117 783 aa7.85□□□□□ -1.15
CDH13-211ENST00000568770 DPEP1P16444 411 aa7.85□□□□□ -1.15
CDH13-211ENST00000568770 PHKA2P46019 1235 aa7.85□□□□□ -1.15
CDH13-211ENST00000568770 FSTL1Q12841 308 aa7.85□□□□□ -1.15
CDH13-211ENST00000568770 C4orf17Q53FE4 359 aa7.85□□□□□ -1.15
CDH13-211ENST00000568770 C9orf131Q5VYM1 1079 aa7.85□□□□□ -1.15
CDH13-211ENST00000568770 TMEM214Q6NUQ4 689 aaKnown RBP7.85□□□□□ -1.15
CDH13-211ENST00000568770 TMOD3Q9NYL9 352 aa7.85□□□□□ -1.15
CDH13-211ENST00000568770 FLT4P35916 1363 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 PLEKHG2Q9H7P9 1386 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 TMF1P82094 1093 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 FKBP5Q13451 457 aaPredicted RBP7.84□□□□□ -1.15
CDH13-211ENST00000568770 TRAPPC3LQ5T215 181 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 LYSMD3Q7Z3D4 306 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 NLGN1Q8N2Q7 840 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 TRIM47Q96LD4 638 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 TESK2Q96S53 571 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 TRAIPQ9BWF2 469 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 RRAGCQ9HB90 399 aa7.84□□□□□ -1.15
CDH13-211ENST00000568770 AFDNP55196 1824 aaKnown RBP7.84□□□□□ -1.15
CDH13-211ENST00000568770 TIAM2Q8IVF5 1701 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 KDM2BQ8NHM5 1336 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 VIRMAQ69YN4 1812 aaKnown RBP7.83□□□□□ -1.16
CDH13-211ENST00000568770 ST20-MTHFSA0A0A6YYL1 179 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 SPATA31C2B4DYI2 1134 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 KCNA3P22001 575 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 ATP2B4P23634 1241 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 NBPF10Q6P3W6 841 aaKnown RBP7.83□□□□□ -1.16
CDH13-211ENST00000568770 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 RHBDD1Q8TEB9 315 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 CCDC87Q9NVE4 849 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 CXXC1Q9P0U4 656 aaPredicted RBP7.83□□□□□ -1.16
CDH13-211ENST00000568770 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 RTCBQ9Y3I0 505 aaKnown RBP7.83□□□□□ -1.16
CDH13-211ENST00000568770 KIF24Q5T7B8 1368 aa7.83□□□□□ -1.16
CDH13-211ENST00000568770 DLEC1Q9Y238 1755 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 PPP1R12BO60237 982 aaPredicted RBP7.82□□□□□ -1.16
CDH13-211ENST00000568770 MAN1A2O60476 641 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 GYS1P13807 737 aa7.82□□□□□ -1.16
CDH13-211ENST00000568770 IGFBP4P22692 258 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms