RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 PARP10Q53GL7 1025 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 LARGE2Q8N3Y3 721 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 AK9Q5TCS8 1911 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 MCMDC2Q4G0Z9 681 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 RUFY3Q7L099 469 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 PMM1Q92871 262 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 TFCP2L1Q9NZI6 479 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 TMEM88BA6NKF7 163 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 APBA3O96018 575 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 SLC9C2Q5TAH2 1124 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 MSL1Q68DK7 614 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 GABBR1Q9UBS5 961 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 WWC3Q9ULE0 1092 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 DENND2AQ9ULE3 1009 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 TUBGCP6Q96RT7 1819 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 ATRNO75882 1429 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 IRF6O14896 467 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 CYP21A2P08686 494 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 DDIT3P35638 169 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 MCCD1P59942 119 aaPredicted RBP10.19□□□□□ -0.78
TCF4-241ENST00000568740 RASGRF1Q13972 1273 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 INCENPQ9NQS7 918 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 ABCF2Q9UG63 623 aa10.19□□□□□ -0.78
TCF4-241ENST00000568740 CNTNAP4Q9C0A0 1308 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 CREB3O43889 395 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
TCF4-241ENST00000568740 GPR108Q9NPR9 543 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 PDRG1Q9NUG6 133 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 HMG20BQ9P0W2 317 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 MAST3O60307 1309 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 BTAF1O14981 1849 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 RNF113AO15541 343 aaKnown RBP10.18□□□□□ -0.78
TCF4-241ENST00000568740 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
TCF4-241ENST00000568740 PUM3Q15397 648 aaKnown RBP10.18□□□□□ -0.78
TCF4-241ENST00000568740 TXNRD3Q86VQ6 643 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 RAB11FIP4Q86YS3 637 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 ANKRD18AQ8IVF6 992 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 CCDC83Q8IWF9 413 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 NLRP3Q96P20 1036 aa10.18□□□□□ -0.78
TCF4-241ENST00000568740 NAP1L2Q9ULW6 460 aaPredicted RBP10.18□□□□□ -0.78
TCF4-241ENST00000568740 CCDC194A0A1B0GVG4 234 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 APPP05067 770 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 HSPD1P10809 573 aaKnown RBP10.17□□□□□ -0.78
TCF4-241ENST00000568740 TPTE2Q6XPS3 522 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 STOX1Q6ZVD7 989 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 MIGA1Q8NAN2 632 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 LPIN2Q92539 896 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
TCF4-241ENST00000568740 PNMA2Q9UL42 364 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 MINPP1Q9UNW1 487 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 HIP1O00291 1037 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 ZNF827Q17R98 1081 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 OLFM4Q6UX06 510 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 GNEQ9Y223 722 aaKnown RBP10.17□□□□□ -0.78
TCF4-241ENST00000568740 MED23Q9ULK4 1368 aa10.17□□□□□ -0.78
TCF4-241ENST00000568740 SMIM22K7EJ46 135 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 FGFR2P21802 821 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 MCM4P33991 863 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 SLC4A8Q2Y0W8 1093 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 ZMYM1Q5SVZ6 1142 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
TCF4-241ENST00000568740 POTEAQ6S8J7 498 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 TTC14Q96N46 770 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 MFRPQ9BY79 579 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 TPCN1Q9ULQ1 816 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 ZDHHC9Q9Y397 364 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 CYP46A1Q9Y6A2 500 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 RPS6KL1Q9Y6S9 549 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 FOXP2O15409 715 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 RECKO95980 971 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 GYS1P13807 737 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 SLC5A1P13866 664 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 RPS8P62241 208 aaKnown RBP10.16□□□□□ -0.78
TCF4-241ENST00000568740 MAP2K5Q13163 448 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 ME3Q16798 604 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 MAGEB6Q8N7X4 407 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 SPATA5Q8NB90 893 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 ZNF532Q9HCE3 1301 aa10.16□□□□□ -0.78
TCF4-241ENST00000568740 MROH5Q6ZUA9 1318 aa10.15□□□□□ -0.78
TCF4-241ENST00000568740 PRKAB2O43741 272 aa10.15□□□□□ -0.78
TCF4-241ENST00000568740 TAGLNQ01995 201 aaKnown RBP10.15□□□□□ -0.78
TCF4-241ENST00000568740 CHAF1AQ13111 956 aaPredicted RBP10.15□□□□□ -0.78
TCF4-241ENST00000568740 VPS37DQ86XT2 251 aa10.15□□□□□ -0.78
TCF4-241ENST00000568740 CNBD1Q8NA66 436 aa10.15□□□□□ -0.78
TCF4-241ENST00000568740 RGS17Q9UGC6 210 aaPredicted RBP10.15□□□□□ -0.78
TCF4-241ENST00000568740 GPAA1O43292 621 aa10.15□□□□□ -0.79
TCF4-241ENST00000568740 RBM6P78332 1123 aaKnown RBP10.15□□□□□ -0.79
TCF4-241ENST00000568740 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.79
TCF4-241ENST00000568740 BLOC1S2Q6QNY1 142 aa10.15□□□□□ -0.79
TCF4-241ENST00000568740 CDC5LQ99459 802 aaKnown RBP10.15□□□□□ -0.79
TCF4-241ENST00000568740 SPOCK3Q9BQ16 436 aa10.15□□□□□ -0.79
TCF4-241ENST00000568740 FGAP02671 866 aa10.14□□□□□ -0.79
TCF4-241ENST00000568740 RXRBP28702 533 aa10.14□□□□□ -0.79
TCF4-241ENST00000568740 LONRF3Q496Y0 759 aa10.14□□□□□ -0.79
TCF4-241ENST00000568740 MCTP1Q6DN14 999 aa10.14□□□□□ -0.79
TCF4-241ENST00000568740 PRR5LQ6MZQ0 368 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms