RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 DIEXFQ68CQ4 756 aaKnown RBP7.61□□□□□ -1.19
CAPN3-217ENST00000567817 AFAP1Q8N556 730 aa7.61□□□□□ -1.19
CAPN3-217ENST00000567817 CEP120Q8N960 986 aa7.61□□□□□ -1.19
CAPN3-217ENST00000567817 CHRDQ9H2X0 955 aa7.61□□□□□ -1.19
CAPN3-217ENST00000567817 SALL4Q9UJQ4 1053 aa7.61□□□□□ -1.19
CAPN3-217ENST00000567817 SYNMO15061 1565 aa7.61□□□□□ -1.19
CAPN3-217ENST00000567817 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-217ENST00000567817 PHACTR2O75167 634 aa7.6□□□□□ -1.19
CAPN3-217ENST00000567817 CENPBP07199 599 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-217ENST00000567817 ATP11AP98196 1134 aa7.6□□□□□ -1.19
CAPN3-217ENST00000567817 GDF6Q6KF10 455 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-217ENST00000567817 SRA1Q9HD15 236 aaKnown RBP7.6□□□□□ -1.19
CAPN3-217ENST00000567817 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
CAPN3-217ENST00000567817 ABCC1P33527 1531 aa7.6□□□□□ -1.19
CAPN3-217ENST00000567817 FAM135AQ9P2D6 1515 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 SOWAHDA6NJG2 315 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 C9orf172C9J069 976 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 BAG6P46379 1132 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 GRIK4Q16099 956 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 CEP135Q66GS9 1140 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 FBXO11Q86XK2 927 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 CITED4Q96RK1 184 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 PBX4Q9BYU1 374 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 MUC3BQ9H195 1237 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.19
CAPN3-217ENST00000567817 TROQ12816 1431 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-217ENST00000567817 CCNB3Q8WWL7 1395 aa7.59□□□□□ -1.2
CAPN3-217ENST00000567817 CDK13Q14004 1512 aaKnown RBP7.58□□□□□ -1.2
CAPN3-217ENST00000567817 MED14O60244 1454 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 KCNA1Q09470 495 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 PDE3BQ13370 1112 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 MAP4K3Q8IVH8 894 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 IL22RA1Q8N6P7 574 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 DCAF11Q8TEB1 546 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 TRAIPQ9BWF2 469 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 RGS17Q9UGC6 210 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-217ENST00000567817 FOXD3Q9UJU5 478 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-217ENST00000567817 DEPDC5O75140 1603 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 DNMT1P26358 1616 aaKnown RBP7.58□□□□□ -1.2
CAPN3-217ENST00000567817 ALKQ9UM73 1620 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 FMN1Q68DA7 1419 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 KIDINS220Q9ULH0 1771 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 VWDEQ8N2E2 1590 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 NEURL4Q96JN8 1562 aa7.58□□□□□ -1.2
CAPN3-217ENST00000567817 EREGO14944 169 aa7.57□□□□□ -1.2
CAPN3-217ENST00000567817 EDN3P14138 238 aa7.57□□□□□ -1.2
CAPN3-217ENST00000567817 SELPP16109 830 aa7.57□□□□□ -1.2
CAPN3-217ENST00000567817 LENG1Q96BZ8 264 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-217ENST00000567817 FAM129BQ96TA1 746 aa7.57□□□□□ -1.2
CAPN3-217ENST00000567817 AMOTL2Q9Y2J4 779 aa7.57□□□□□ -1.2
CAPN3-217ENST00000567817 PLXNC1O60486 1568 aa7.57□□□□□ -1.2
CAPN3-217ENST00000567817 ITSN2Q9NZM3 1697 aa7.57□□□□□ -1.2
CAPN3-217ENST00000567817 PREX2Q70Z35 1606 aa7.56□□□□□ -1.2
CAPN3-217ENST00000567817 PTPRAP18433 802 aa7.56□□□□□ -1.2
CAPN3-217ENST00000567817 GATA4P43694 442 aa7.56□□□□□ -1.2
CAPN3-217ENST00000567817 NRG1Q02297 640 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-217ENST00000567817 ANKLE2Q86XL3 938 aa7.56□□□□□ -1.2
CAPN3-217ENST00000567817 DZANK1Q9NVP4 752 aa7.56□□□□□ -1.2
CAPN3-217ENST00000567817 PPME1Q9Y570 386 aa7.56□□□□□ -1.2
CAPN3-217ENST00000567817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-217ENST00000567817 CLTCQ00610 1675 aaKnown RBP7.56□□□□□ -1.2
CAPN3-217ENST00000567817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.56□□□□□ -1.2
CAPN3-217ENST00000567817 FAM177BA6PVY3 158 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 DEAF1O75398 565 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-217ENST00000567817 NEFLP07196 543 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 CDC27P30260 824 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 ADGRE1Q14246 886 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 LACRTQ9GZZ8 138 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 FYCO1Q9BQS8 1478 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 NLRP1Q9C000 1473 aa7.55□□□□□ -1.2
CAPN3-217ENST00000567817 TIAM1Q13009 1591 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 NPHP4O75161 1426 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-217ENST00000567817 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
CAPN3-217ENST00000567817 NFKBIEO00221 500 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 ACPPP15309 386 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 MBTPS1Q14703 1052 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-217ENST00000567817 TMEM102Q8N9M5 508 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-217ENST00000567817 POP1Q99575 1024 aaKnown RBP7.54□□□□□ -1.2
CAPN3-217ENST00000567817 RBCK1Q9BYM8 510 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 ADAM19Q9H013 955 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 CDC42BPBQ9Y5S2 1711 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 DHX57Q6P158 1386 aaKnown RBP7.54□□□□□ -1.2
CAPN3-217ENST00000567817 LRRC9Q6ZRR7 1453 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
CAPN3-217ENST00000567817 FAM135BQ49AJ0 1406 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 LRRC7Q96NW7 1537 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 PDE2AO00408 941 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-217ENST00000567817 DLL1O00548 723 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 RANGAP1P46060 587 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-217ENST00000567817 SETDB1Q15047 1291 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 IGF2-ASQ6U949 168 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 DMRTB1Q96MA1 342 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 OSMRQ99650 979 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 ZKSCAN3Q9BRR0 538 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 BIN2Q9UBW5 565 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-217ENST00000567817 IVNS1ABPQ9Y6Y0 642 aa7.53□□□□□ -1.2
CAPN3-217ENST00000567817 TNRQ92752 1358 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms