RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 MTMR14Q8NCE2 650 aa21.11■□□□□ 0.97
COMMD4-220ENST00000567720 ZNF512BQ96KM6 892 aaPredicted RBP21.11■□□□□ 0.97
COMMD4-220ENST00000567720 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
COMMD4-220ENST00000567720 SUGT1Q9Y2Z0 365 aa21.11■□□□□ 0.97
COMMD4-220ENST00000567720 SPDYE2BA6NHP3 402 aa21.1■□□□□ 0.97
COMMD4-220ENST00000567720 SPDYE6P0CI01 402 aa21.1■□□□□ 0.97
COMMD4-220ENST00000567720 ANGEL2Q5VTE6 544 aaKnown RBP21.1■□□□□ 0.97
COMMD4-220ENST00000567720 SERPINA10Q9UK55 444 aa21.1■□□□□ 0.97
COMMD4-220ENST00000567720 FOCADQ5VW36 1801 aa21.1■□□□□ 0.97
COMMD4-220ENST00000567720 MAST3O60307 1309 aa21.09■□□□□ 0.97
COMMD4-220ENST00000567720 IFIT2P09913 472 aaKnown RBP21.09■□□□□ 0.97
COMMD4-220ENST00000567720 CRKP46108 304 aa21.09■□□□□ 0.97
COMMD4-220ENST00000567720 GLIS2Q9BZE0 524 aaPredicted RBP21.09■□□□□ 0.97
COMMD4-220ENST00000567720 SNRKQ9NRH2 765 aa21.09■□□□□ 0.97
COMMD4-220ENST00000567720 PITPNM2Q9BZ72 1349 aa21.08■□□□□ 0.97
COMMD4-220ENST00000567720 ADM5C9JUS6 153 aa21.08■□□□□ 0.97
COMMD4-220ENST00000567720 TRAF5O00463 557 aa21.08■□□□□ 0.97
COMMD4-220ENST00000567720 LDHBP07195 334 aaKnown RBP21.08■□□□□ 0.97
COMMD4-220ENST00000567720 FMR1Q06787 632 aaKnown RBP eCLIP21.08■□□□□ 0.97
COMMD4-220ENST00000567720 DLGAP5Q15398 846 aa21.08■□□□□ 0.97
COMMD4-220ENST00000567720 ZGPATQ8N5A5 531 aaKnown RBP21.08■□□□□ 0.97
COMMD4-220ENST00000567720 DIXDC1Q155Q3 683 aa21.07■□□□□ 0.96
COMMD4-220ENST00000567720 PRMT6Q96LA8 375 aaPredicted RBP21.07■□□□□ 0.96
COMMD4-220ENST00000567720 ABCF2Q9UG63 623 aa21.07■□□□□ 0.96
COMMD4-220ENST00000567720 NDUFB9Q9Y6M9 179 aa21.07■□□□□ 0.96
COMMD4-220ENST00000567720 HSPA6P17066 643 aa21.06■□□□□ 0.96
COMMD4-220ENST00000567720 ZAP70P43403 619 aa21.06■□□□□ 0.96
COMMD4-220ENST00000567720 RBM5P52756 815 aaKnown RBP eCLIP21.06■□□□□ 0.96
COMMD4-220ENST00000567720 HDLBPQ00341 1268 aaKnown RBP21.06■□□□□ 0.96
COMMD4-220ENST00000567720 DLK2Q6UY11 383 aa21.06■□□□□ 0.96
COMMD4-220ENST00000567720 TBC1D9Q6ZT07 1266 aa21.06■□□□□ 0.96
COMMD4-220ENST00000567720 KRT26Q7Z3Y9 468 aa21.06■□□□□ 0.96
COMMD4-220ENST00000567720 ZNF384Q8TF68 577 aa21.06■□□□□ 0.96
COMMD4-220ENST00000567720 TEKT1Q969V4 418 aa21.06■□□□□ 0.96
COMMD4-220ENST00000567720 SCAF8Q9UPN6 1271 aaKnown RBP21.06■□□□□ 0.96
COMMD4-220ENST00000567720 OTOFQ9HC10 1997 aa21.05■□□□□ 0.96
COMMD4-220ENST00000567720 IGHDP01880 384 aa21.05■□□□□ 0.96
COMMD4-220ENST00000567720 CYP2E1P05181 493 aaPredicted RBP21.05■□□□□ 0.96
COMMD4-220ENST00000567720 DCPSQ96C86 337 aaKnown RBP21.05■□□□□ 0.96
COMMD4-220ENST00000567720 GCC1Q96CN9 775 aa21.05■□□□□ 0.96
COMMD4-220ENST00000567720 DAGLAQ9Y4D2 1042 aa21.05■□□□□ 0.96
COMMD4-220ENST00000567720 PAPPA2Q9BXP8 1791 aa21.05■□□□□ 0.96
COMMD4-220ENST00000567720 CLRN2A0PK11 232 aa21.04■□□□□ 0.96
COMMD4-220ENST00000567720 CDC37L1Q7L3B6 337 aa21.04■□□□□ 0.96
COMMD4-220ENST00000567720 USP48Q86UV5 1035 aa21.04■□□□□ 0.96
COMMD4-220ENST00000567720 DZIP1Q86YF9 867 aaKnown RBP21.04■□□□□ 0.96
COMMD4-220ENST00000567720 SMC5Q8IY18 1101 aa21.04■□□□□ 0.96
COMMD4-220ENST00000567720 ZDHHC15Q96MV8 337 aa21.04■□□□□ 0.96
COMMD4-220ENST00000567720 GAKO14976 1311 aa21.04■□□□□ 0.96
COMMD4-220ENST00000567720 APLP1P51693 650 aa21.03■□□□□ 0.96
COMMD4-220ENST00000567720 SPDYE2Q495Y8 402 aa21.03■□□□□ 0.96
COMMD4-220ENST00000567720 HHIPL2Q6UWX4 724 aa21.03■□□□□ 0.96
COMMD4-220ENST00000567720 SULF1Q8IWU6 871 aa21.03■□□□□ 0.96
COMMD4-220ENST00000567720 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-220ENST00000567720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.03■□□□□ 0.96
COMMD4-220ENST00000567720 RWDD1Q9H446 243 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-220ENST00000567720 PIH1D3Q9NQM4 214 aaKnown RBP21.03■□□□□ 0.96
COMMD4-220ENST00000567720 AK9Q5TCS8 1911 aa21.03■□□□□ 0.96
COMMD4-220ENST00000567720 SSC5DA1L4H1 1573 aa21.02■□□□□ 0.96
COMMD4-220ENST00000567720 MECOMQ03112 1051 aa21.02■□□□□ 0.96
COMMD4-220ENST00000567720 SPTY2D1Q68D10 685 aaPredicted RBP21.02■□□□□ 0.96
COMMD4-220ENST00000567720 APOBEC3HQ6NTF7 200 aaKnown RBP21.02■□□□□ 0.96
COMMD4-220ENST00000567720 ERICH6Q7L0X2 663 aa21.02■□□□□ 0.96
COMMD4-220ENST00000567720 APOBEC3FQ8IUX4 373 aaKnown RBP21.02■□□□□ 0.96
COMMD4-220ENST00000567720 MRIQ9BWK5 157 aa21.02■□□□□ 0.96
COMMD4-220ENST00000567720 ANTXR1Q9H6X2 564 aa21.02■□□□□ 0.96
COMMD4-220ENST00000567720 TDRD3Q9H7E2 651 aaKnown RBP21.02■□□□□ 0.96
COMMD4-220ENST00000567720 MROH7-TTC4A0A0A0MT08 1334 aa21.02■□□□□ 0.95
COMMD4-220ENST00000567720 SALL3Q9BXA9 1300 aa21.02■□□□□ 0.95
COMMD4-220ENST00000567720 RFX7Q2KHR2 1363 aa21.01■□□□□ 0.95
COMMD4-220ENST00000567720 MYO1BO43795 1136 aa21.01■□□□□ 0.95
COMMD4-220ENST00000567720 HTRA3P83110 453 aa21.01■□□□□ 0.95
COMMD4-220ENST00000567720 TSHZ3Q63HK5 1081 aa21.01■□□□□ 0.95
COMMD4-220ENST00000567720 NSUN4Q96CB9 384 aaKnown RBP21.01■□□□□ 0.95
COMMD4-220ENST00000567720 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
COMMD4-220ENST00000567720 ATP5JP18859 108 aa21■□□□□ 0.95
COMMD4-220ENST00000567720 ANKRD45Q5TZF3 282 aa21■□□□□ 0.95
COMMD4-220ENST00000567720 CDCA5Q96FF9 252 aa21■□□□□ 0.95
COMMD4-220ENST00000567720 DNAJC2Q99543 621 aaKnown RBP21■□□□□ 0.95
COMMD4-220ENST00000567720 VEZTQ9HBM0 779 aa21■□□□□ 0.95
COMMD4-220ENST00000567720 RAI14Q9P0K7 980 aa21■□□□□ 0.95
COMMD4-220ENST00000567720 ZNF70Q9UC06 446 aaPredicted RBP21■□□□□ 0.95
COMMD4-220ENST00000567720 DDX60LQ5H9U9 1706 aaKnown RBP21■□□□□ 0.95
COMMD4-220ENST00000567720 NAV1Q8NEY1 1877 aa20.99■□□□□ 0.95
COMMD4-220ENST00000567720 EDC3Q96F86 508 aaKnown RBP20.99■□□□□ 0.95
COMMD4-220ENST00000567720 ECHDC1Q9NTX5 307 aa20.99■□□□□ 0.95
COMMD4-220ENST00000567720 LRP2BPQ9P2M1 347 aa20.99■□□□□ 0.95
COMMD4-220ENST00000567720 THSD7BQ9C0I4 1608 aa20.99■□□□□ 0.95
COMMD4-220ENST00000567720 CACNB3P54284 484 aa20.98■□□□□ 0.95
COMMD4-220ENST00000567720 CST9Q5W186 159 aa20.98■□□□□ 0.95
COMMD4-220ENST00000567720 BOLA2Q9H3K6 86 aa20.98■□□□□ 0.95
COMMD4-220ENST00000567720 ZNF408Q9H9D4 720 aa20.98■□□□□ 0.95
COMMD4-220ENST00000567720 CNTNAP1P78357 1384 aa20.97■□□□□ 0.95
COMMD4-220ENST00000567720 SIPA1L1O43166 1804 aa20.97■□□□□ 0.95
COMMD4-220ENST00000567720 GOLIM4O00461 696 aa20.97■□□□□ 0.95
COMMD4-220ENST00000567720 CELF2O95319 508 aaKnown RBP20.97■□□□□ 0.95
COMMD4-220ENST00000567720 B4GALNT3Q6L9W6 998 aa20.97■□□□□ 0.95
COMMD4-220ENST00000567720 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
COMMD4-220ENST00000567720 HAUS7Q99871 368 aa20.97■□□□□ 0.95
COMMD4-220ENST00000567720 CREBZFQ9NS37 354 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms