RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 SRGNP10124 158 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 CYP7A1P22680 504 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 NBR1Q14596 966 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 NFKBIBQ15653 356 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 SPTY2D1Q68D10 685 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 ZGPATQ8N5A5 531 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 SH2B1Q9NRF2 756 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 COL1A1P02452 1464 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-206ENST00000567379 FGAP02671 866 aa12.9□□□□□ -0.34
VPS9D1-206ENST00000567379 NUCB2P80303 420 aa12.9□□□□□ -0.34
VPS9D1-206ENST00000567379 ALX1Q15699 326 aa12.9□□□□□ -0.34
VPS9D1-206ENST00000567379 WDR66Q8TBY9 1149 aa12.9□□□□□ -0.34
VPS9D1-206ENST00000567379 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
VPS9D1-206ENST00000567379 TAF6LQ9Y6J9 622 aa12.9□□□□□ -0.34
VPS9D1-206ENST00000567379 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 E7EWF7 191 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 H0YIN7 160 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 ZNF213O14771 459 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 SLC34A2O95436 690 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 TTLL5Q6EMB2 1281 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 NAA16Q6N069 864 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 TXNRD3Q86VQ6 643 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 TDRD7Q8NHU6 1098 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-206ENST00000567379 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 FOXP2O15409 715 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 CAPN15O75808 1086 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 FGD1P98174 961 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 STYK1Q6J9G0 422 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 STOX1Q6ZVD7 989 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 TBC1D16Q8TBP0 767 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 CCDC88AQ3V6T2 1871 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
VPS9D1-206ENST00000567379 MAST2Q6P0Q8 1798 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 DUOX1Q9NRD9 1551 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 HAND2P61296 217 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 TRDNQ13061 729 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 IFNL3Q8IZI9 196 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 LCORLQ8N3X6 602 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 MPNDQ8N594 471 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 NAPBQ9H115 298 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
VPS9D1-206ENST00000567379 GSG1L2A8MUP6 293 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 IL1R1P14778 569 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 GSTO1P78417 241 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 MECOMQ03112 1051 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 Q6ZUG5 572 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 CNKSR1Q969H4 720 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 NSUN4Q96CB9 384 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 GPR101Q96P66 508 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 GBP4Q96PP9 640 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 LARP6Q9BRS8 491 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 POLLQ9UGP5 575 aa12.86□□□□□ -0.35
VPS9D1-206ENST00000567379 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 LDHCP07864 332 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 MCM5P33992 734 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 TDO2P48775 406 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 PRELPP51888 382 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 ME3Q16798 604 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 DPP8Q6V1X1 898 aaPredicted RBP12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 SLC51AQ86UW1 340 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 TNPO1Q92973 898 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 EYA3Q99504 573 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
VPS9D1-206ENST00000567379 LARGE1O95461 756 aa12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 ADGRA1Q86SQ6 560 aa12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 RIOK1Q9BRS2 568 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 NOL10Q9BSC4 688 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms