RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 IFNL1Q8IU54 200 aa18.8■□□□□ 0.6
RNF40-209ENST00000566703 TRMT2AQ8IZ69 625 aaKnown RBP18.8■□□□□ 0.6
RNF40-209ENST00000566703 CLMNQ96JQ2 1002 aa18.8■□□□□ 0.6
RNF40-209ENST00000566703 HPS5Q9UPZ3 1129 aa18.8■□□□□ 0.6
RNF40-209ENST00000566703 SSC5DA1L4H1 1573 aa18.8■□□□□ 0.6
RNF40-209ENST00000566703 IFIT1P09914 478 aaKnown RBP18.79■□□□□ 0.6
RNF40-209ENST00000566703 OTUD7BQ6GQQ9 843 aa18.79■□□□□ 0.6
RNF40-209ENST00000566703 TESPA1A2RU30 521 aaPredicted RBP18.78■□□□□ 0.6
RNF40-209ENST00000566703 FGFR2P21802 821 aa18.78■□□□□ 0.6
RNF40-209ENST00000566703 FBXO46Q6PJ61 603 aaPredicted RBP18.78■□□□□ 0.6
RNF40-209ENST00000566703 TEPSINQ96N21 525 aa18.78■□□□□ 0.6
RNF40-209ENST00000566703 R3HDMLQ9H3Y0 253 aa18.78■□□□□ 0.6
RNF40-209ENST00000566703 FBXO3Q9UK99 471 aa18.78■□□□□ 0.6
RNF40-209ENST00000566703 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
RNF40-209ENST00000566703 ECM29Q5VYK3 1845 aa18.77■□□□□ 0.6
RNF40-209ENST00000566703 EYA2O00167 538 aa18.77■□□□□ 0.6
RNF40-209ENST00000566703 RFX5P48382 616 aaPredicted RBP18.77■□□□□ 0.6
RNF40-209ENST00000566703 BCAMP50895 628 aa18.77■□□□□ 0.6
RNF40-209ENST00000566703 CHAF1AQ13111 956 aaPredicted RBP18.77■□□□□ 0.6
RNF40-209ENST00000566703 PUM3Q15397 648 aaKnown RBP18.77■□□□□ 0.6
RNF40-209ENST00000566703 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
RNF40-209ENST00000566703 TEKT1Q969V4 418 aa18.77■□□□□ 0.6
RNF40-209ENST00000566703 SMC4Q9NTJ3 1288 aa18.77■□□□□ 0.6
RNF40-209ENST00000566703 IQSEC3Q9UPP2 1182 aaPredicted RBP18.77■□□□□ 0.6
RNF40-209ENST00000566703 GRIK5Q16478 980 aa18.76■□□□□ 0.59
RNF40-209ENST00000566703 FKBP1CQ5VVH2 108 aa18.76■□□□□ 0.59
RNF40-209ENST00000566703 LPIN2Q92539 896 aa18.76■□□□□ 0.59
RNF40-209ENST00000566703 CDCA7LQ96GN5 454 aa18.76■□□□□ 0.59
RNF40-209ENST00000566703 ZDHHC15Q96MV8 337 aa18.76■□□□□ 0.59
RNF40-209ENST00000566703 MAST3O60307 1309 aa18.75■□□□□ 0.59
RNF40-209ENST00000566703 TCP10L2B9ZVM9 353 aa18.75■□□□□ 0.59
RNF40-209ENST00000566703 IGF2BP3O00425 579 aaKnown RBP eCLIP18.75■□□□□ 0.59
RNF40-209ENST00000566703 MAP3K9P80192 1104 aa18.75■□□□□ 0.59
RNF40-209ENST00000566703 HHIPL2Q6UWX4 724 aa18.75■□□□□ 0.59
RNF40-209ENST00000566703 UBTFL1P0CB47 393 aaPredicted RBP18.74■□□□□ 0.59
RNF40-209ENST00000566703 SLC5A1P13866 664 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 GJA5P36382 358 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 SOX10P56693 466 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 FAM83AQ86UY5 434 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 WDR66Q8TBY9 1149 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 HOOK2Q96ED9 719 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 TMEM39BQ9GZU3 492 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 TMOD2Q9NZR1 351 aa18.74■□□□□ 0.59
RNF40-209ENST00000566703 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.74■□□□□ 0.59
RNF40-209ENST00000566703 CIAO1O76071 339 aa18.73■□□□□ 0.59
RNF40-209ENST00000566703 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.73■□□□□ 0.59
RNF40-209ENST00000566703 OPTNQ96CV9 577 aa18.73■□□□□ 0.59
RNF40-209ENST00000566703 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
RNF40-209ENST00000566703 ZBTB22O15209 634 aa18.72■□□□□ 0.59
RNF40-209ENST00000566703 APOBEC3HQ6NTF7 200 aaKnown RBP18.72■□□□□ 0.59
RNF40-209ENST00000566703 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
RNF40-209ENST00000566703 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.72■□□□□ 0.59
RNF40-209ENST00000566703 ERO1AQ96HE7 468 aa18.72■□□□□ 0.59
RNF40-209ENST00000566703 MS4A4AQ96JQ5 239 aa18.72■□□□□ 0.59
RNF40-209ENST00000566703 ELP3Q9H9T3 547 aa18.72■□□□□ 0.59
RNF40-209ENST00000566703 NOB1Q9ULX3 412 aaKnown RBP18.72■□□□□ 0.59
RNF40-209ENST00000566703 CSADQ9Y600 493 aa18.72■□□□□ 0.59
RNF40-209ENST00000566703 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
RNF40-209ENST00000566703 CDAN1Q8IWY9 1227 aa18.71■□□□□ 0.59
RNF40-209ENST00000566703 PTPN18Q99952 460 aa18.71■□□□□ 0.59
RNF40-209ENST00000566703 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
RNF40-209ENST00000566703 GTF2A2P52657 109 aa18.7■□□□□ 0.58
RNF40-209ENST00000566703 CRHR2Q13324 411 aa18.7■□□□□ 0.58
RNF40-209ENST00000566703 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
RNF40-209ENST00000566703 TRIM17Q9Y577 477 aa18.7■□□□□ 0.58
RNF40-209ENST00000566703 IL15P40933 162 aaPredicted RBP18.69■□□□□ 0.58
RNF40-209ENST00000566703 VGLL4Q14135 290 aa18.69■□□□□ 0.58
RNF40-209ENST00000566703 OTOP1Q7RTM1 612 aa18.69■□□□□ 0.58
RNF40-209ENST00000566703 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
RNF40-209ENST00000566703 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
RNF40-209ENST00000566703 SEMA3EO15041 775 aa18.68■□□□□ 0.58
RNF40-209ENST00000566703 SP3Q02447 781 aa18.68■□□□□ 0.58
RNF40-209ENST00000566703 ATP2B3Q16720 1220 aa18.68■□□□□ 0.58
RNF40-209ENST00000566703 DCAF15Q66K64 600 aa18.68■□□□□ 0.58
RNF40-209ENST00000566703 INTS3Q68E01 1043 aaKnown RBP18.68■□□□□ 0.58
RNF40-209ENST00000566703 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
RNF40-209ENST00000566703 ARAP2Q8WZ64 1704 aa18.68■□□□□ 0.58
RNF40-209ENST00000566703 CACNB3P54284 484 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 ARHGEF6Q15052 776 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 ERO1BQ86YB8 467 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 FAM151AQ8WW52 585 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 BRI3BPQ8WY22 251 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 ZFYVE28Q9HCC9 887 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
RNF40-209ENST00000566703 DENND2AQ9ULE3 1009 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 LAMB1P07942 1786 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 SALL1Q9NSC2 1324 aa18.67■□□□□ 0.58
RNF40-209ENST00000566703 RPAP1Q9BWH6 1393 aaPredicted RBP18.67■□□□□ 0.58
RNF40-209ENST00000566703 CCL15-CCL14A0A0B4J2E2 113 aa18.66■□□□□ 0.58
RNF40-209ENST00000566703 WDHD1O75717 1129 aaPredicted RBP18.66■□□□□ 0.58
RNF40-209ENST00000566703 RARSP54136 660 aaKnown RBP18.66■□□□□ 0.58
RNF40-209ENST00000566703 CCL15Q16663 113 aa18.66■□□□□ 0.58
RNF40-209ENST00000566703 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
RNF40-209ENST00000566703 SIL1Q9H173 461 aa18.66■□□□□ 0.58
RNF40-209ENST00000566703 EFCC1Q9HA90 598 aa18.66■□□□□ 0.58
RNF40-209ENST00000566703 LRRFIP2Q9Y608 721 aaKnown RBP18.66■□□□□ 0.58
RNF40-209ENST00000566703 SLC34A2O95436 690 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 LDHBP07195 334 aaKnown RBP18.65■□□□□ 0.58
RNF40-209ENST00000566703 GNAI3P08754 354 aa18.65■□□□□ 0.58
RNF40-209ENST00000566703 CETPP11597 493 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms