RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 MCM2P49736 904 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 GTF2IP78347 998 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 TNIP1Q15025 636 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 EDC3Q96F86 508 aaKnown RBP11.76□□□□□ -0.53
SF3B3-207ENST00000566095 NACAP1Q9BZK3 213 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 ANTXR1Q9H6X2 564 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-207ENST00000566095 HDAC9Q9UKV0 1011 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 ZNRF3Q9ULT6 936 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 MAST2Q6P0Q8 1798 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 SNED1Q8TER0 1413 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 MYH7P12883 1935 aa11.76□□□□□ -0.53
SF3B3-207ENST00000566095 DOCK2Q92608 1830 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 EIF6P56537 245 aaKnown RBP11.75□□□□□ -0.53
SF3B3-207ENST00000566095 DOK7Q18PE1 504 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 PI16Q6UXB8 463 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 NLGN2Q8NFZ4 835 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 DSCC1Q9BVC3 393 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 DBNDD1Q9H9R9 158 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-207ENST00000566095 NDUFB9Q9Y6M9 179 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-207ENST00000566095 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
SF3B3-207ENST00000566095 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
SF3B3-207ENST00000566095 MAGEB6P1A0A0J9YX57 407 aa11.74□□□□□ -0.53
SF3B3-207ENST00000566095 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
SF3B3-207ENST00000566095 OLFM4Q6UX06 510 aa11.74□□□□□ -0.53
SF3B3-207ENST00000566095 OGFOD1Q8N543 542 aa11.74□□□□□ -0.53
SF3B3-207ENST00000566095 KCNB2Q92953 911 aa11.74□□□□□ -0.53
SF3B3-207ENST00000566095 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
SF3B3-207ENST00000566095 GPR101Q96P66 508 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-207ENST00000566095 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
SF3B3-207ENST00000566095 CRNKL1Q9BZJ0 848 aaKnown RBP11.74□□□□□ -0.53
SF3B3-207ENST00000566095 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
SF3B3-207ENST00000566095 COL1A1P02452 1464 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-207ENST00000566095 LMNB1P20700 586 aa11.73□□□□□ -0.53
SF3B3-207ENST00000566095 RPS12P25398 132 aaKnown RBP11.73□□□□□ -0.53
SF3B3-207ENST00000566095 KRT32Q14532 448 aa11.73□□□□□ -0.53
SF3B3-207ENST00000566095 FER1L6Q2WGJ9 1857 aa11.73□□□□□ -0.53
SF3B3-207ENST00000566095 TSGA10IPQ3SY00 556 aa11.73□□□□□ -0.53
SF3B3-207ENST00000566095 ARHGAP27Q6ZUM4 889 aa11.73□□□□□ -0.53
SF3B3-207ENST00000566095 AGBL3Q8NEM8 1001 aa11.73□□□□□ -0.53
SF3B3-207ENST00000566095 NSUN4Q96CB9 384 aaKnown RBP11.73□□□□□ -0.53
SF3B3-207ENST00000566095 WTIPA6NIX2 430 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-207ENST00000566095 GPAA1O43292 621 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 PRDX5P30044 214 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 HSPA4P34932 840 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 NT5C2P49902 561 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 MECOMQ03112 1051 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 CIAPIN1Q6FI81 312 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-207ENST00000566095 KIF2CQ99661 725 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 CHD4Q14839 1912 aa11.72□□□□□ -0.53
SF3B3-207ENST00000566095 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 ZMYM6O95789 1325 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.53
SF3B3-207ENST00000566095 TCRBV5S4A2TA0A5A2 114 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 ST18O60284 1047 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 MBD4O95243 580 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 APPP05067 770 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 PSMA5P28066 241 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 GPR162Q16538 588 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 IMMTQ16891 758 aaKnown RBP11.71□□□□□ -0.53
SF3B3-207ENST00000566095 RSBN1LQ6PCB5 846 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-207ENST00000566095 MAP4K1Q92918 833 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 SERPINA10Q9UK55 444 aa11.71□□□□□ -0.53
SF3B3-207ENST00000566095 TTF2Q9UNY4 1162 aaKnown RBP11.71□□□□□ -0.53
SF3B3-207ENST00000566095 PATL2C9JE40 543 aaKnown RBP11.7□□□□□ -0.54
SF3B3-207ENST00000566095 NFKBIEO00221 500 aa11.7□□□□□ -0.54
SF3B3-207ENST00000566095 SLC3A2P08195 630 aaKnown RBP11.7□□□□□ -0.54
SF3B3-207ENST00000566095 VIL1P09327 827 aaKnown RBP11.7□□□□□ -0.54
SF3B3-207ENST00000566095 HMGB1P09429 215 aaKnown RBP11.7□□□□□ -0.54
SF3B3-207ENST00000566095 PDIA4P13667 645 aaKnown RBP11.7□□□□□ -0.54
SF3B3-207ENST00000566095 DACT2Q5SW24 774 aa11.7□□□□□ -0.54
SF3B3-207ENST00000566095 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
SF3B3-207ENST00000566095 NAPBQ9H115 298 aa11.7□□□□□ -0.54
SF3B3-207ENST00000566095 TMOD2Q9NZR1 351 aa11.7□□□□□ -0.54
SF3B3-207ENST00000566095 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
SF3B3-207ENST00000566095 GAKO14976 1311 aa11.69□□□□□ -0.54
SF3B3-207ENST00000566095 MYO1BO43795 1136 aa11.69□□□□□ -0.54
SF3B3-207ENST00000566095 HSPD1P10809 573 aaKnown RBP11.69□□□□□ -0.54
SF3B3-207ENST00000566095 PCP11498 1178 aaKnown RBP11.69□□□□□ -0.54
SF3B3-207ENST00000566095 TDO2P48775 406 aa11.69□□□□□ -0.54
SF3B3-207ENST00000566095 PPP4CP60510 307 aa11.69□□□□□ -0.54
SF3B3-207ENST00000566095 ALX1Q15699 326 aa11.69□□□□□ -0.54
SF3B3-207ENST00000566095 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
SF3B3-207ENST00000566095 PUS7LQ9H0K6 701 aaKnown RBP11.69□□□□□ -0.54
SF3B3-207ENST00000566095 ALDH8A1Q9H2A2 487 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-207ENST00000566095 ZNF287Q9HBT7 754 aa11.69□□□□□ -0.54
SF3B3-207ENST00000566095 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms