RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PAPLNO95428 1278 aa7.99□□□□□ -1.13
CHD9-215ENST00000565442 DLGAP3O95886 979 aa7.99□□□□□ -1.13
CHD9-215ENST00000565442 VN1R5Q7Z5H4 357 aa7.99□□□□□ -1.13
CHD9-215ENST00000565442 BSNDQ8WZ55 320 aa7.99□□□□□ -1.13
CHD9-215ENST00000565442 RPLP1P05386 114 aaKnown RBP7.98□□□□□ -1.13
CHD9-215ENST00000565442 EXOSC6Q5RKV6 272 aaKnown RBP7.98□□□□□ -1.13
CHD9-215ENST00000565442 ZNF648Q5T619 568 aaPredicted RBP7.98□□□□□ -1.13
CHD9-215ENST00000565442 XKR5Q6UX68 686 aa7.98□□□□□ -1.13
CHD9-215ENST00000565442 GATA6Q92908 595 aa7.98□□□□□ -1.13
CHD9-215ENST00000565442 SOX17Q9H6I2 414 aaPredicted RBP7.98□□□□□ -1.13
CHD9-215ENST00000565442 ZC3H7BQ9UGR2 993 aaKnown RBP7.98□□□□□ -1.13
CHD9-215ENST00000565442 ATCAYQ86WG3 371 aa7.97□□□□□ -1.13
CHD9-215ENST00000565442 NXPE3Q969Y0 559 aa7.97□□□□□ -1.13
CHD9-215ENST00000565442 SOX4Q06945 474 aaPredicted RBP7.96□□□□□ -1.14
CHD9-215ENST00000565442 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.14
CHD9-215ENST00000565442 TXNDC2Q86VQ3 553 aa7.96□□□□□ -1.14
CHD9-215ENST00000565442 CCER1Q8TC90 406 aaPredicted RBP7.96□□□□□ -1.14
CHD9-215ENST00000565442 OSMRQ99650 979 aa7.96□□□□□ -1.14
CHD9-215ENST00000565442 CHRDQ9H2X0 955 aa7.96□□□□□ -1.14
CHD9-215ENST00000565442 LRRC4CQ9HCJ2 640 aa7.96□□□□□ -1.14
CHD9-215ENST00000565442 PMEPA1Q969W9 287 aa7.95□□□□□ -1.14
CHD9-215ENST00000565442 ZKSCAN3Q9BRR0 538 aa7.95□□□□□ -1.14
CHD9-215ENST00000565442 GNEQ9Y223 722 aaKnown RBP7.95□□□□□ -1.14
CHD9-215ENST00000565442 DBX1A6NMT0 343 aa7.94□□□□□ -1.14
CHD9-215ENST00000565442 SERPINB4P48594 390 aa7.94□□□□□ -1.14
CHD9-215ENST00000565442 CYP27A1Q02318 531 aa7.94□□□□□ -1.14
CHD9-215ENST00000565442 ZNF124Q15973 351 aa7.94□□□□□ -1.14
CHD9-215ENST00000565442 FBLN7Q53RD9 439 aa7.94□□□□□ -1.14
CHD9-215ENST00000565442 ZNF765Q7L2R6 523 aa7.94□□□□□ -1.14
CHD9-215ENST00000565442 EDEM1Q92611 657 aa7.94□□□□□ -1.14
CHD9-215ENST00000565442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
CHD9-215ENST00000565442 BIN1O00499 593 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 ESRRAP11474 423 aaPredicted RBP7.93□□□□□ -1.14
CHD9-215ENST00000565442 ADH5P11766 374 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 PCSK2P16519 638 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 MAP7Q14244 749 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 PLCL1Q15111 1095 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 SPOCD1Q6ZMY3 1216 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 GGNBP2Q9H3C7 697 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 SEPT3Q9UH03 358 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 SLC5A6Q9Y289 635 aa7.93□□□□□ -1.14
CHD9-215ENST00000565442 A6NHS1 94 aa7.92□□□□□ -1.14
CHD9-215ENST00000565442 ABL1P00519 1130 aa7.92□□□□□ -1.14
CHD9-215ENST00000565442 GSTM4Q03013 218 aa7.92□□□□□ -1.14
CHD9-215ENST00000565442 DNM1Q05193 864 aaKnown RBP7.92□□□□□ -1.14
CHD9-215ENST00000565442 ZNF792Q3KQV3 632 aa7.92□□□□□ -1.14
CHD9-215ENST00000565442 ASAP3Q8TDY4 903 aa7.92□□□□□ -1.14
CHD9-215ENST00000565442 BCL7CQ8WUZ0 217 aaPredicted RBP7.92□□□□□ -1.14
CHD9-215ENST00000565442 ACTL7BQ9Y614 415 aa7.92□□□□□ -1.14
CHD9-215ENST00000565442 CARMIL2Q6F5E8 1435 aa7.92□□□□□ -1.14
CHD9-215ENST00000565442 NFICP08651 508 aa7.91□□□□□ -1.14
CHD9-215ENST00000565442 RAB6AP20340 208 aa7.91□□□□□ -1.14
CHD9-215ENST00000565442 C8orf34Q49A92 452 aa7.91□□□□□ -1.14
CHD9-215ENST00000565442 TMCO4Q5TGY1 634 aa7.91□□□□□ -1.14
CHD9-215ENST00000565442 ZNF574Q6ZN55 896 aaPredicted RBP7.91□□□□□ -1.14
CHD9-215ENST00000565442 BHLHE41Q9C0J9 482 aaPredicted RBP7.91□□□□□ -1.14
CHD9-215ENST00000565442 ANO2Q9NQ90 1003 aa7.91□□□□□ -1.14
CHD9-215ENST00000565442 MTMR7Q9Y216 660 aa7.91□□□□□ -1.14
CHD9-215ENST00000565442 EREGO14944 169 aa7.9□□□□□ -1.14
CHD9-215ENST00000565442 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
CHD9-215ENST00000565442 FARP2O94887 1054 aaPredicted RBP7.9□□□□□ -1.14
CHD9-215ENST00000565442 PDGFAP04085 211 aa7.9□□□□□ -1.14
CHD9-215ENST00000565442 EDN3P14138 238 aa7.9□□□□□ -1.14
CHD9-215ENST00000565442 WFDC3Q8IUB2 231 aa7.9□□□□□ -1.14
CHD9-215ENST00000565442 TTC16Q8NEE8 873 aa7.9□□□□□ -1.14
CHD9-215ENST00000565442 NRSN2Q9GZP1 204 aa7.9□□□□□ -1.14
CHD9-215ENST00000565442 SEMA6CQ9H3T2 930 aa7.9□□□□□ -1.14
CHD9-215ENST00000565442 ZNF211Q13398 564 aaPredicted RBP7.89□□□□□ -1.15
CHD9-215ENST00000565442 STK11IPQ8N1F8 1099 aa7.89□□□□□ -1.15
CHD9-215ENST00000565442 GTF3C2Q8WUA4 911 aaPredicted RBP7.89□□□□□ -1.15
CHD9-215ENST00000565442 KRTAP4-11Q9BYQ6 195 aa7.89□□□□□ -1.15
CHD9-215ENST00000565442 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.88□□□□□ -1.15
CHD9-215ENST00000565442 MTMR3Q13615 1198 aa7.88□□□□□ -1.15
CHD9-215ENST00000565442 PKN1Q16512 942 aa7.88□□□□□ -1.15
CHD9-215ENST00000565442 SND1Q7KZF4 910 aaKnown RBP eCLIP7.88□□□□□ -1.15
CHD9-215ENST00000565442 SPRED2Q7Z698 418 aa7.88□□□□□ -1.15
CHD9-215ENST00000565442 CCDC9Q9Y3X0 531 aaKnown RBP7.88□□□□□ -1.15
CHD9-215ENST00000565442 SOWAHDA6NJG2 315 aa7.87□□□□□ -1.15
CHD9-215ENST00000565442 MZF1P28698 734 aaPredicted RBP7.87□□□□□ -1.15
CHD9-215ENST00000565442 ATG4DQ86TL0 474 aaPredicted RBP7.87□□□□□ -1.15
CHD9-215ENST00000565442 ACSS3Q9H6R3 686 aa7.87□□□□□ -1.15
CHD9-215ENST00000565442 PHACTR2O75167 634 aa7.86□□□□□ -1.15
CHD9-215ENST00000565442 NOM1Q5C9Z4 860 aaKnown RBP7.86□□□□□ -1.15
CHD9-215ENST00000565442 DYMQ7RTS9 669 aa7.86□□□□□ -1.15
CHD9-215ENST00000565442 HELQQ8TDG4 1101 aa7.86□□□□□ -1.15
CHD9-215ENST00000565442 FAM105AQ9NUU6 356 aa7.86□□□□□ -1.15
CHD9-215ENST00000565442 H3BRB1 525 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 CTSBP07858 339 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 MFAP1P55081 439 aaKnown RBP7.85□□□□□ -1.15
CHD9-215ENST00000565442 HP1BP3Q5SSJ5 553 aaPredicted RBP7.85□□□□□ -1.15
CHD9-215ENST00000565442 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 SEZ6L2Q6UXD5 910 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 KSR1Q8IVT5 923 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 SNX29Q8TEQ0 813 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 FAM168AQ92567 244 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 MISP3Q96FF7 219 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 TUT1Q9H6E5 874 aaKnown RBP7.85□□□□□ -1.15
CHD9-215ENST00000565442 C1GALT1Q9NS00 363 aa7.85□□□□□ -1.15
CHD9-215ENST00000565442 BIN2Q9UBW5 565 aaPredicted RBP7.85□□□□□ -1.15
CHD9-215ENST00000565442 METTL12A8MUP2 240 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms