RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SALL1Q9NSC2 1324 aa23.22■■□□□ 1.31
CLN6-205ENST00000564846 A0A0G2JLW4 131 aa23.22■■□□□ 1.31
CLN6-205ENST00000564846 CHAF1AQ13111 956 aaPredicted RBP23.22■■□□□ 1.31
CLN6-205ENST00000564846 SPTY2D1Q68D10 685 aaPredicted RBP23.22■■□□□ 1.31
CLN6-205ENST00000564846 WDR66Q8TBY9 1149 aa23.22■■□□□ 1.31
CLN6-205ENST00000564846 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.22■■□□□ 1.31
CLN6-205ENST00000564846 TOB2Q14106 344 aaPredicted RBP23.22■■□□□ 1.31
CLN6-205ENST00000564846 NAA16Q6N069 864 aaPredicted RBP23.22■■□□□ 1.31
CLN6-205ENST00000564846 TMX4Q9H1E5 349 aaPredicted RBP23.22■■□□□ 1.31
CLN6-205ENST00000564846 CCDC125Q86Z20 511 aa23.21■■□□□ 1.31
CLN6-205ENST00000564846 IFNL3Q8IZI9 196 aa23.21■■□□□ 1.31
CLN6-205ENST00000564846 LCORLQ8N3X6 602 aa23.21■■□□□ 1.31
CLN6-205ENST00000564846 TCEANC2Q96MN5 208 aa23.21■■□□□ 1.31
CLN6-205ENST00000564846 LARP6Q9BRS8 491 aaKnown RBP23.21■■□□□ 1.31
CLN6-205ENST00000564846 NACAP1Q9BZK3 213 aa23.21■■□□□ 1.31
CLN6-205ENST00000564846 POLLQ9UGP5 575 aa23.21■■□□□ 1.31
CLN6-205ENST00000564846 MYH13Q9UKX3 1938 aa23.21■■□□□ 1.31
CLN6-205ENST00000564846 MAGEB6P1A0A0J9YX57 407 aa23.2■■□□□ 1.3
CLN6-205ENST00000564846 HAND2P61296 217 aa23.2■■□□□ 1.3
CLN6-205ENST00000564846 EXOSC10Q01780 885 aaKnown RBP23.2■■□□□ 1.3
CLN6-205ENST00000564846 STYK1Q6J9G0 422 aa23.2■■□□□ 1.3
CLN6-205ENST00000564846 C2CD5Q86YS7 1000 aa23.2■■□□□ 1.3
CLN6-205ENST00000564846 NSUN4Q96CB9 384 aaKnown RBP23.2■■□□□ 1.3
CLN6-205ENST00000564846 TPCN1Q9ULQ1 816 aa23.2■■□□□ 1.3
CLN6-205ENST00000564846 CACNA1SQ13698 1873 aa23.2■■□□□ 1.3
CLN6-205ENST00000564846 H0YIN7 160 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 ME3Q16798 604 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 ADGRA1Q86SQ6 560 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 MIGA1Q8NAN2 632 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 GPR101Q96P66 508 aaPredicted RBP23.19■■□□□ 1.3
CLN6-205ENST00000564846 NAPBQ9H115 298 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 CD209Q9NNX6 404 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 SLC4A4Q9Y6R1 1079 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 GSG1L2A8MUP6 293 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 C6orf229H3BNL8 230 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 IL1R1P14778 569 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 MECOMQ03112 1051 aa23.19■■□□□ 1.3
CLN6-205ENST00000564846 TNPO1Q92973 898 aaKnown RBP23.19■■□□□ 1.3
CLN6-205ENST00000564846 COL11A2P13942 1736 aaPredicted RBP23.19■■□□□ 1.3
CLN6-205ENST00000564846 LARGE1O95461 756 aa23.18■■□□□ 1.3
CLN6-205ENST00000564846 Q6ZUG5 572 aa23.18■■□□□ 1.3
CLN6-205ENST00000564846 ZNF384Q8TF68 577 aa23.18■■□□□ 1.3
CLN6-205ENST00000564846 ZNF622Q969S3 477 aaKnown RBP eCLIP23.18■■□□□ 1.3
CLN6-205ENST00000564846 RIOK1Q9BRS2 568 aaKnown RBP23.18■■□□□ 1.3
CLN6-205ENST00000564846 EPB41L4AQ9HCS5 686 aaPredicted RBP23.18■■□□□ 1.3
CLN6-205ENST00000564846 FGD1P98174 961 aa23.17■■□□□ 1.3
CLN6-205ENST00000564846 FBXL16Q8N461 479 aa23.17■■□□□ 1.3
CLN6-205ENST00000564846 MPNDQ8N594 471 aa23.17■■□□□ 1.3
CLN6-205ENST00000564846 NCOA7Q8NI08 942 aa23.17■■□□□ 1.3
CLN6-205ENST00000564846 SLC16A10Q8TF71 515 aa23.17■■□□□ 1.3
CLN6-205ENST00000564846 PRDX5P30044 214 aa23.17■■□□□ 1.3
CLN6-205ENST00000564846 RALYLQ86SE5 291 aaKnown RBP23.17■■□□□ 1.3
CLN6-205ENST00000564846 AGXT2Q9BYV1 514 aa23.17■■□□□ 1.3
CLN6-205ENST00000564846 TRDNQ13061 729 aa23.16■■□□□ 1.3
CLN6-205ENST00000564846 CCDC83Q8IWF9 413 aa23.16■■□□□ 1.3
CLN6-205ENST00000564846 DUOX1Q9NRD9 1551 aa23.15■■□□□ 1.3
CLN6-205ENST00000564846 PRKAB2O43741 272 aa23.15■■□□□ 1.3
CLN6-205ENST00000564846 LDHBP07195 334 aaKnown RBP23.15■■□□□ 1.3
CLN6-205ENST00000564846 TDO2P48775 406 aa23.15■■□□□ 1.3
CLN6-205ENST00000564846 DZIP1Q86YF9 867 aaKnown RBP23.15■■□□□ 1.3
CLN6-205ENST00000564846 GBP4Q96PP9 640 aa23.15■■□□□ 1.3
CLN6-205ENST00000564846 WDR19Q8NEZ3 1342 aa23.15■■□□□ 1.3
CLN6-205ENST00000564846 MAST2Q6P0Q8 1798 aa23.15■■□□□ 1.3
CLN6-205ENST00000564846 MCM5P33992 734 aa23.14■■□□□ 1.3
CLN6-205ENST00000564846 DPP8Q6V1X1 898 aaPredicted RBP23.14■■□□□ 1.3
CLN6-205ENST00000564846 MB21D2Q8IYB1 491 aaPredicted RBP23.14■■□□□ 1.3
CLN6-205ENST00000564846 NBPF3Q9H094 633 aa23.14■■□□□ 1.3
CLN6-205ENST00000564846 SMC3Q9UQE7 1217 aa23.14■■□□□ 1.3
CLN6-205ENST00000564846 JAG2Q9Y219 1238 aa23.14■■□□□ 1.3
CLN6-205ENST00000564846 LAMA4Q16363 1823 aa23.14■■□□□ 1.29
CLN6-205ENST00000564846 MCM4P33991 863 aa23.14■■□□□ 1.29
CLN6-205ENST00000564846 BRF1Q92994 677 aa23.14■■□□□ 1.29
CLN6-205ENST00000564846 CNKSR1Q969H4 720 aa23.14■■□□□ 1.29
CLN6-205ENST00000564846 COA1Q9GZY4 146 aa23.14■■□□□ 1.29
CLN6-205ENST00000564846 GSTO1P78417 241 aa23.13■■□□□ 1.29
CLN6-205ENST00000564846 PKP1Q13835 747 aa23.13■■□□□ 1.29
CLN6-205ENST00000564846 CLEC17AQ6ZS10 378 aa23.13■■□□□ 1.29
CLN6-205ENST00000564846 TBC1D10CQ8IV04 446 aa23.13■■□□□ 1.29
CLN6-205ENST00000564846 ZC3H12CQ9C0D7 883 aaKnown RBP23.13■■□□□ 1.29
CLN6-205ENST00000564846 ST3GAL1Q11201 340 aa23.12■■□□□ 1.29
CLN6-205ENST00000564846 GIMAP6Q6P9H5 292 aa23.12■■□□□ 1.29
CLN6-205ENST00000564846 NECAB1Q8N987 351 aa23.12■■□□□ 1.29
CLN6-205ENST00000564846 TBC1D22AQ8WUA7 517 aa23.12■■□□□ 1.29
CLN6-205ENST00000564846 LRRC2Q9BYS8 371 aa23.12■■□□□ 1.29
CLN6-205ENST00000564846 PDGFDQ9GZP0 370 aaPredicted RBP23.12■■□□□ 1.29
CLN6-205ENST00000564846 PRC1O43663 620 aa23.11■■□□□ 1.29
CLN6-205ENST00000564846 DYNLL1P63167 89 aaKnown RBP23.11■■□□□ 1.29
CLN6-205ENST00000564846 EYA3Q99504 573 aa23.11■■□□□ 1.29
CLN6-205ENST00000564846 FAM205AQ6ZU69 1335 aa23.11■■□□□ 1.29
CLN6-205ENST00000564846 SDR42E1Q8WUS8 393 aa23.1■■□□□ 1.29
CLN6-205ENST00000564846 GTF3C6Q969F1 213 aa23.1■■□□□ 1.29
CLN6-205ENST00000564846 CRNKL1Q9BZJ0 848 aaKnown RBP23.1■■□□□ 1.29
CLN6-205ENST00000564846 CNNM2Q9H8M5 875 aa23.1■■□□□ 1.29
CLN6-205ENST00000564846 ZDHHC9Q9Y397 364 aa23.1■■□□□ 1.29
CLN6-205ENST00000564846 CCDC88AQ3V6T2 1871 aa23.1■■□□□ 1.29
CLN6-205ENST00000564846 DDX11L8A8MPP1 907 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 BRD1O95696 1058 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 LDHCP07864 332 aa23.09■■□□□ 1.29
CLN6-205ENST00000564846 CHRNA5P30532 468 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms