RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TRAK1Q9UPV9 953 aa8.4□□□□□ -1.06
CHD9-212ENST00000564641 BRD1O95696 1058 aa8.39□□□□□ -1.07
CHD9-212ENST00000564641 B3GALT4O96024 378 aa8.39□□□□□ -1.07
CHD9-212ENST00000564641 SOX4Q06945 474 aaPredicted RBP8.39□□□□□ -1.07
CHD9-212ENST00000564641 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
CHD9-212ENST00000564641 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
CHD9-212ENST00000564641 CCDC74AQ96AQ1 378 aa8.39□□□□□ -1.07
CHD9-212ENST00000564641 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
CHD9-212ENST00000564641 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
CHD9-212ENST00000564641 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
CHD9-212ENST00000564641 DLGAP3O95886 979 aa8.38□□□□□ -1.07
CHD9-212ENST00000564641 RXRBP28702 533 aa8.38□□□□□ -1.07
CHD9-212ENST00000564641 POU4F3Q15319 338 aa8.38□□□□□ -1.07
CHD9-212ENST00000564641 SPRED3Q2MJR0 410 aa8.38□□□□□ -1.07
CHD9-212ENST00000564641 RPS26P11Q5JNZ5 115 aaPredicted RBP8.38□□□□□ -1.07
CHD9-212ENST00000564641 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
CHD9-212ENST00000564641 CORO1BQ9BR76 489 aa8.38□□□□□ -1.07
CHD9-212ENST00000564641 NIF3L1Q9GZT8 377 aa8.38□□□□□ -1.07
CHD9-212ENST00000564641 ZNF576Q9H609 170 aa8.38□□□□□ -1.07
CHD9-212ENST00000564641 FAM95CA0A1B0GW59 222 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 PRR19A6NJB7 356 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 SOWAHDA6NJG2 315 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 GPR182O15218 404 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 IGHA2P01877 340 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 MAOBP27338 520 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD9-212ENST00000564641 SGO2Q562F6 1265 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 PAOXQ6QHF9 649 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 SHKBP1Q8TBC3 707 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 PSMG3-AS1Q96PY0 264 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 PPP4R2Q9NY27 417 aa8.37□□□□□ -1.07
CHD9-212ENST00000564641 AP3B2Q13367 1082 aa8.36□□□□□ -1.07
CHD9-212ENST00000564641 C2CD4AQ8NCU7 369 aaPredicted RBP8.36□□□□□ -1.07
CHD9-212ENST00000564641 CSRNP1Q96S65 589 aa8.36□□□□□ -1.07
CHD9-212ENST00000564641 ATG3Q9NT62 314 aa8.36□□□□□ -1.07
CHD9-212ENST00000564641 SYNGAP1Q96PV0 1343 aa8.35□□□□□ -1.07
CHD9-212ENST00000564641 GADD45BO75293 160 aaPredicted RBP8.35□□□□□ -1.07
CHD9-212ENST00000564641 ADH5P11766 374 aa8.35□□□□□ -1.07
CHD9-212ENST00000564641 DRD2P14416 443 aa8.35□□□□□ -1.07
CHD9-212ENST00000564641 EZH1Q92800 747 aaPredicted RBP8.35□□□□□ -1.07
CHD9-212ENST00000564641 METTL22Q9BUU2 404 aaPredicted RBP8.35□□□□□ -1.07
CHD9-212ENST00000564641 RAD18Q9NS91 495 aa8.35□□□□□ -1.07
CHD9-212ENST00000564641 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 DTX1Q86Y01 620 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 MFSD14AQ96MC6 490 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 KRTAP4-8Q9BYQ9 185 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 PIM2Q9P1W9 311 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 DCTN4Q9UJW0 460 aa8.34□□□□□ -1.07
CHD9-212ENST00000564641 MED26O95402 600 aa8.33□□□□□ -1.08
CHD9-212ENST00000564641 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
CHD9-212ENST00000564641 SPINK2P20155 84 aa8.33□□□□□ -1.08
CHD9-212ENST00000564641 MAP7Q14244 749 aa8.33□□□□□ -1.08
CHD9-212ENST00000564641 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
CHD9-212ENST00000564641 TRIM56Q9BRZ2 755 aaKnown RBP8.33□□□□□ -1.08
CHD9-212ENST00000564641 BIN2Q9UBW5 565 aaPredicted RBP8.33□□□□□ -1.08
CHD9-212ENST00000564641 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
CHD9-212ENST00000564641 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.32□□□□□ -1.08
CHD9-212ENST00000564641 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
CHD9-212ENST00000564641 OSBPL1AQ9BXW6 950 aa8.32□□□□□ -1.08
CHD9-212ENST00000564641 GRM2Q14416 872 aa8.31□□□□□ -1.08
CHD9-212ENST00000564641 TMC7Q7Z402 723 aa8.31□□□□□ -1.08
CHD9-212ENST00000564641 WNT11O96014 354 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 FOSL1P15407 271 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 GP2P55259 537 aaKnown RBP8.3□□□□□ -1.08
CHD9-212ENST00000564641 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 PPP2R3AQ06190 1150 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 AKAP4Q5JQC9 854 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 FBXL6Q8N531 539 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 ACTL7BQ9Y614 415 aa8.3□□□□□ -1.08
CHD9-212ENST00000564641 AOC2O75106 756 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 F13BP05160 661 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 PDE3AQ14432 1141 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 DTHD1Q6ZMT9 781 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 DYMQ7RTS9 669 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 GLIS3Q8NEA6 775 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 EPS8L3Q8TE67 593 aaKnown RBP8.29□□□□□ -1.08
CHD9-212ENST00000564641 TBC1D32Q96NH3 1257 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
CHD9-212ENST00000564641 PRKAG2Q9UGJ0 569 aa8.29□□□□□ -1.08
CHD9-212ENST00000564641 CTSBP07858 339 aa8.28□□□□□ -1.08
CHD9-212ENST00000564641 SLFN14P0C7P3 912 aa8.28□□□□□ -1.08
CHD9-212ENST00000564641 ASPAP45381 313 aa8.28□□□□□ -1.08
CHD9-212ENST00000564641 PLCB3Q01970 1234 aa8.28□□□□□ -1.08
CHD9-212ENST00000564641 ACSS3Q9H6R3 686 aa8.28□□□□□ -1.08
CHD9-212ENST00000564641 AP4E1Q9UPM8 1137 aa8.28□□□□□ -1.08
CHD9-212ENST00000564641 COL17A1Q9UMD9 1497 aaPredicted RBP8.27□□□□□ -1.09
CHD9-212ENST00000564641 MAPK1P28482 360 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 IRAK1P51617 712 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 DSC3Q14574 896 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 DUSP27Q5VZP5 1158 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 MCTP1Q6DN14 999 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 SEMA6CQ9H3T2 930 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 FAM105AQ9NUU6 356 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms