RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	CNNM1	Q9NRU3	951 aa		31.59	■■■□□ 2.65
CYLD-208	ENST00000564634	POTEF	A5A3E0	1075 aa		31.58	■■■□□ 2.65
CYLD-208	ENST00000564634	USP2	O75604	605 aa	Predicted RBP	31.58	■■■□□ 2.65
CYLD-208	ENST00000564634	LDHAL6A	Q6ZMR3	332 aa		31.58	■■■□□ 2.65
CYLD-208	ENST00000564634	FRAT1	Q92837	279 aa	Predicted RBP	31.57	■■■□□ 2.64
CYLD-208	ENST00000564634	ERO1A	Q96HE7	468 aa		31.57	■■■□□ 2.64
CYLD-208	ENST00000564634	ANKRD13A	Q8IZ07	590 aa		31.56	■■■□□ 2.64
CYLD-208	ENST00000564634	BICC1	Q9H694	974 aa	Known RBP	31.56	■■■□□ 2.64
CYLD-208	ENST00000564634	ELP3	Q9H9T3	547 aa		31.56	■■■□□ 2.64
CYLD-208	ENST00000564634	RABL6	Q3YEC7	729 aa	Predicted RBP	31.55	■■■□□ 2.64
CYLD-208	ENST00000564634	OTUD7B	Q6GQQ9	843 aa		31.55	■■■□□ 2.64
CYLD-208	ENST00000564634	ATF7IP	Q6VMQ6	1270 aa		31.55	■■■□□ 2.64
CYLD-208	ENST00000564634	ARAP2	Q8WZ64	1704 aa		31.55	■■■□□ 2.64
CYLD-208	ENST00000564634	UNCX	A6NJT0	531 aa		31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	TRIM27	P14373	513 aa		31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	MFSD14B	Q5SR56	506 aa		31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	INTS3	Q68E01	1043 aa	Known RBP	31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	CDAN1	Q8IWY9	1227 aa		31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	PTPN18	Q99952	460 aa		31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	ZNF70	Q9UC06	446 aa	Predicted RBP	31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	TTF2	Q9UNY4	1162 aa	Known RBP	31.54	■■■□□ 2.64
CYLD-208	ENST00000564634	GYG1	P46976	350 aa		31.53	■■■□□ 2.64
CYLD-208	ENST00000564634	SPDYE2	Q495Y8	402 aa		31.53	■■■□□ 2.64
CYLD-208	ENST00000564634	OPTN	Q96CV9	577 aa		31.53	■■■□□ 2.64
CYLD-208	ENST00000564634	TDRD3	Q9H7E2	651 aa	Known RBP	31.53	■■■□□ 2.64
CYLD-208	ENST00000564634	PTPN22	Q9Y2R2	807 aa		31.53	■■■□□ 2.64
CYLD-208	ENST00000564634	FAM205A	Q6ZU69	1335 aa		31.52	■■■□□ 2.64
CYLD-208	ENST00000564634	ZKSCAN2	Q63HK3	967 aa		31.52	■■■□□ 2.64
CYLD-208	ENST00000564634	ANKRD44	Q8N8A2	993 aa		31.52	■■■□□ 2.64
CYLD-208	ENST00000564634	CAP1	Q01518	475 aa		31.51	■■■□□ 2.63
CYLD-208	ENST00000564634	TNFAIP1	Q13829	316 aa		31.51	■■■□□ 2.63
CYLD-208	ENST00000564634	EFCC1	Q9HA90	598 aa		31.51	■■■□□ 2.63
CYLD-208	ENST00000564634	HDAC5	Q9UQL6	1122 aa		31.51	■■■□□ 2.63
CYLD-208	ENST00000564634	BRCA2	P51587	3418 aa		31.51	■■■□□ 2.63
CYLD-208	ENST00000564634	RBBP6	Q7Z6E9	1792 aa	Known RBP	31.51	■■■□□ 2.63
CYLD-208	ENST00000564634	UBTFL1	P0CB47	393 aa	Predicted RBP	31.5	■■■□□ 2.63
CYLD-208	ENST00000564634	TDRD7	Q8NHU6	1098 aa	Known RBP	31.5	■■■□□ 2.63
CYLD-208	ENST00000564634	CNKSR2	Q8WXI2	1034 aa		31.5	■■■□□ 2.63
CYLD-208	ENST00000564634	TESPA1	A2RU30	521 aa	Predicted RBP	31.49	■■■□□ 2.63
CYLD-208	ENST00000564634	TCP10L2	B9ZVM9	353 aa		31.49	■■■□□ 2.63
CYLD-208	ENST00000564634	SP3	Q02447	781 aa		31.49	■■■□□ 2.63
CYLD-208	ENST00000564634	HIBADH	P31937	336 aa	Known RBP	31.48	■■■□□ 2.63
CYLD-208	ENST00000564634	SERPINA10	Q9UK55	444 aa		31.48	■■■□□ 2.63
CYLD-208	ENST00000564634	UBE4A	Q14139	1066 aa		31.47	■■■□□ 2.63
CYLD-208	ENST00000564634	DZIP1L	Q8IYY4	767 aa	Known RBP	31.47	■■■□□ 2.63
CYLD-208	ENST00000564634	GCC1	Q96CN9	775 aa		31.47	■■■□□ 2.63
CYLD-208	ENST00000564634	TEPSIN	Q96N21	525 aa		31.47	■■■□□ 2.63
CYLD-208	ENST00000564634	PUS3	Q9BZE2	481 aa	Known RBP	31.47	■■■□□ 2.63
CYLD-208	ENST00000564634	TMEM39B	Q9GZU3	492 aa		31.47	■■■□□ 2.63
CYLD-208	ENST00000564634	CRK	P46108	304 aa		31.46	■■■□□ 2.63
CYLD-208	ENST00000564634	CLUAP1	Q96AJ1	413 aa		31.46	■■■□□ 2.63
CYLD-208	ENST00000564634	MS4A4A	Q96JQ5	239 aa		31.46	■■■□□ 2.63
CYLD-208	ENST00000564634	FAM84B	Q96KN1	310 aa	Predicted RBP	31.46	■■■□□ 2.63
CYLD-208	ENST00000564634	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.46	■■■□□ 2.63
CYLD-208	ENST00000564634	TNN	Q9UQP3	1299 aa		31.46	■■■□□ 2.63
CYLD-208	ENST00000564634	VGLL4	Q14135	290 aa		31.45	■■■□□ 2.63
CYLD-208	ENST00000564634	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	31.45	■■■□□ 2.63
CYLD-208	ENST00000564634	BRI3BP	Q8WY22	251 aa		31.45	■■■□□ 2.63
CYLD-208	ENST00000564634	ARMC5	Q96C12	935 aa		31.45	■■■□□ 2.63
CYLD-208	ENST00000564634	GNAI3	P08754	354 aa		31.44	■■■□□ 2.62
CYLD-208	ENST00000564634	EN2	P19622	333 aa	Predicted RBP	31.44	■■■□□ 2.62
CYLD-208	ENST00000564634	GRIK5	Q16478	980 aa		31.44	■■■□□ 2.62
CYLD-208	ENST00000564634	MEIS3	Q99687	375 aa		31.44	■■■□□ 2.62
CYLD-208	ENST00000564634	CCL15-CCL14	A0A0B4J2E2	113 aa		31.43	■■■□□ 2.62
CYLD-208	ENST00000564634	CHAF1A	Q13111	956 aa	Predicted RBP	31.43	■■■□□ 2.62
CYLD-208	ENST00000564634	TAF1C	Q15572	869 aa	Predicted RBP	31.43	■■■□□ 2.62
CYLD-208	ENST00000564634	CCL15	Q16663	113 aa		31.43	■■■□□ 2.62
CYLD-208	ENST00000564634	OTUD5	Q96G74	571 aa		31.42	■■■□□ 2.62
CYLD-208	ENST00000564634	KIAA0100	Q14667	2235 aa	Known RBP	31.41	■■■□□ 2.62
CYLD-208	ENST00000564634	TNNI2	P48788	182 aa		31.41	■■■□□ 2.62
CYLD-208	ENST00000564634	CACNB3	P54284	484 aa		31.41	■■■□□ 2.62
CYLD-208	ENST00000564634	CSAD	Q9Y600	493 aa		31.41	■■■□□ 2.62
CYLD-208	ENST00000564634	LRRFIP2	Q9Y608	721 aa	Known RBP	31.41	■■■□□ 2.62
CYLD-208	ENST00000564634	MAP3K9	P80192	1104 aa		31.4	■■■□□ 2.62
CYLD-208	ENST00000564634	VPS37D	Q86XT2	251 aa		31.4	■■■□□ 2.62
CYLD-208	ENST00000564634	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	31.4	■■■□□ 2.62
CYLD-208	ENST00000564634	RIPOR2	Q9Y4F9	1068 aa		31.4	■■■□□ 2.62
CYLD-208	ENST00000564634	GTF2A2	P52657	109 aa		31.39	■■■□□ 2.62
CYLD-208	ENST00000564634	HABP4	Q5JVS0	413 aa	Known RBP	31.39	■■■□□ 2.62
CYLD-208	ENST00000564634	FAM43A	Q8N2R8	423 aa		31.39	■■■□□ 2.62
CYLD-208	ENST00000564634	TMEM57	Q8N5G2	664 aa		31.39	■■■□□ 2.62
CYLD-208	ENST00000564634	ZFYVE28	Q9HCC9	887 aa		31.39	■■■□□ 2.62
CYLD-208	ENST00000564634	PTCH2	Q9Y6C5	1203 aa		31.39	■■■□□ 2.62
CYLD-208	ENST00000564634	FTSJ3	Q8IY81	847 aa	Known RBP	31.38	■■■□□ 2.61
CYLD-208	ENST00000564634	MROH5	Q6ZUA9	1318 aa		31.38	■■■□□ 2.61
CYLD-208	ENST00000564634	RFX5	P48382	616 aa	Predicted RBP	31.37	■■■□□ 2.61
CYLD-208	ENST00000564634	ZNF333	Q96JL9	665 aa		31.37	■■■□□ 2.61
CYLD-208	ENST00000564634	ZSWIM8	A7E2V4	1837 aa		31.37	■■■□□ 2.61
CYLD-208	ENST00000564634	FRAT2	O75474	233 aa	Predicted RBP	31.36	■■■□□ 2.61
CYLD-208	ENST00000564634	SLC9C1	Q4G0N8	1177 aa		31.36	■■■□□ 2.61
CYLD-208	ENST00000564634	TMEM106C	Q9BVX2	250 aa		31.36	■■■□□ 2.61
CYLD-208	ENST00000564634	MYC	P01106	439 aa	Predicted RBP	31.35	■■■□□ 2.61
CYLD-208	ENST00000564634	LRRC24	Q50LG9	513 aa		31.35	■■■□□ 2.61
CYLD-208	ENST00000564634	METTL24	Q5JXM2	366 aa		31.35	■■■□□ 2.61
CYLD-208	ENST00000564634	FBXO33	Q7Z6M2	555 aa		31.35	■■■□□ 2.61
CYLD-208	ENST00000564634	KLHDC4	Q8TBB5	520 aa		31.35	■■■□□ 2.61
CYLD-208	ENST00000564634	RCAN3	Q9UKA8	241 aa		31.35	■■■□□ 2.61
CYLD-208	ENST00000564634	TEKT1	Q969V4	418 aa		31.34	■■■□□ 2.61
CYLD-208	ENST00000564634	SNCAIP	Q9Y6H5	919 aa		31.34	■■■□□ 2.61
CYLD-208	ENST00000564634	SPDYE5	A6NIY4	337 aa		31.33	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms