RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ABTB2Q8N961 1025 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 WFDC12Q8WWY7 111 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 CARD11Q9BXL7 1154 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 FAM135AQ9P2D6 1515 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 MRC2Q9UBG0 1479 aa6.12□□□□□ -1.43
CAPN3-212ENST00000564503 KIF1BO60333 1816 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 SAMD9LQ8IVG5 1584 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 GRIN2AQ12879 1464 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 ABCC10Q5T3U5 1492 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 C9orf84Q5VXU9 1444 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 PRAG1Q86YV5 1406 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 ZNF644Q9H582 1327 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-212ENST00000564503 DLL1O00548 723 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 SCNN1AP37088 669 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 NFKBIBQ15653 356 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 ATCAYQ86WG3 371 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 CRBNQ96SW2 442 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-212ENST00000564503 TRIM33Q9UPN9 1127 aa6.11□□□□□ -1.43
CAPN3-212ENST00000564503 SHROOM2Q13796 1616 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 MADDQ8WXG6 1647 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 ABCC2Q92887 1545 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 IFT140Q96RY7 1462 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 PRG4Q92954 1404 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-212ENST00000564503 EIF3AQ14152 1382 aaKnown RBP6.1□□□□□ -1.43
CAPN3-212ENST00000564503 H2AFB1P0C5Y9 115 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 H2AFB2P0C5Z0 115 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 IREB2P48200 963 aaKnown RBP6.1□□□□□ -1.43
CAPN3-212ENST00000564503 HYAL2Q12891 473 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 ZMYM1Q5SVZ6 1142 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 CENPQQ7L2Z9 268 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-212ENST00000564503 TP53INP1Q96A56 240 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 C1orf115Q9H7X2 142 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 IFT172Q9UG01 1749 aa6.1□□□□□ -1.43
CAPN3-212ENST00000564503 SYNJ2O15056 1496 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 CCDC141Q6ZP82 1450 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 NUP160Q12769 1436 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 GPRASP1Q5JY77 1395 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 KDM2BQ8NHM5 1336 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 ST20-MTHFSA0A0A6YYL1 179 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 TMEM88BA6NKF7 163 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 CYP2E1P05181 493 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-212ENST00000564503 NOS3P29474 1203 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 SETDB1Q15047 1291 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 PRSS36Q5K4E3 855 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 HELQQ8TDG4 1101 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 NUDT16Q96DE0 195 aaKnown RBP6.09□□□□□ -1.43
CAPN3-212ENST00000564503 SPACA7Q96KW9 195 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 ELP3Q9H9T3 547 aa6.09□□□□□ -1.43
CAPN3-212ENST00000564503 ABI2Q9NYB9 513 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-212ENST00000564503 CFDP1Q9UEE9 299 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-212ENST00000564503 ZC3H13Q5T200 1668 aaKnown RBP6.09□□□□□ -1.43
CAPN3-212ENST00000564503 NUP155O75694 1391 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 SHPRHQ149N8 1683 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 SSFA2P28290 1259 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 ATP11AP98196 1134 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 FOXD4L6Q3SYB3 417 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-212ENST00000564503 CEP135Q66GS9 1140 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 PDE12Q6L8Q7 609 aaKnown RBP6.08□□□□□ -1.44
CAPN3-212ENST00000564503 FOXD4L3Q6VB84 417 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-212ENST00000564503 CACTIN-AS1Q8N1I8 211 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-212ENST00000564503 GTF3C2Q8WUA4 911 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-212ENST00000564503 UBE2Q2Q8WVN8 375 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 DUOX2Q9NRD8 1548 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 A2MP01023 1474 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 ERBINQ96RT1 1412 aa6.08□□□□□ -1.44
CAPN3-212ENST00000564503 KIF4AO95239 1232 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 NOM1Q5C9Z4 860 aaKnown RBP6.07□□□□□ -1.44
CAPN3-212ENST00000564503 MAP4K3Q8IVH8 894 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 FAM43AQ8N2R8 423 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 CEP120Q8N960 986 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 EDEM1Q92611 657 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 FRAT1Q92837 279 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-212ENST00000564503 MEGF10Q96KG7 1140 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 MUC3BQ9H195 1237 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 RASSF4Q9H2L5 321 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 GGNBP2Q9H3C7 697 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 SRA1Q9HD15 236 aaKnown RBP6.07□□□□□ -1.44
CAPN3-212ENST00000564503 TMEM63CQ9P1W3 806 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 CNTN3Q9P232 1028 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 BRPF3Q9ULD4 1205 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 PPME1Q9Y570 386 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 PLB1Q6P1J6 1458 aa6.07□□□□□ -1.44
CAPN3-212ENST00000564503 MAGI1Q96QZ7 1491 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-212ENST00000564503 ASXL1Q8IXJ9 1541 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 LINC01387J3KSC0 135 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 SMNDC1O75940 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
CAPN3-212ENST00000564503 ALX3O95076 343 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 RPLP1P05386 114 aaKnown RBP6.06□□□□□ -1.44
CAPN3-212ENST00000564503 DNM1Q05193 864 aaKnown RBP6.06□□□□□ -1.44
CAPN3-212ENST00000564503 XKR5Q6UX68 686 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 ADAMTSL4Q6UY14 1074 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 ZNF438Q7Z4V0 828 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 TMEM130Q8N3G9 435 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 DCAF11Q8TEB1 546 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 PBX4Q9BYU1 374 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 LACRTQ9GZZ8 138 aa6.06□□□□□ -1.44
CAPN3-212ENST00000564503 MRPL18Q9H0U6 180 aaKnown RBP6.06□□□□□ -1.44
CAPN3-212ENST00000564503 AKTIPQ9H8T0 292 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms