RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 GIMAP6Q6P9H5 292 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 CLEC4GQ6UXB4 293 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 TBC1D10CQ8IV04 446 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 AIDAQ96BJ3 306 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 FUCA2Q9BTY2 467 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 ZMYM6O95789 1325 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 KLF18A0A0U1RQI7 1052 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 GOLGA6L4A6NEF3 574 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 APPP05067 770 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 MAP3K12Q12852 859 aa19.41■□□□□ 0.7
CCNF-204ENST00000564333 CDC5LQ99459 802 aaKnown RBP19.41■□□□□ 0.7
CCNF-204ENST00000564333 TAF1P21675 1872 aa19.4■□□□□ 0.7
CCNF-204ENST00000564333 ECM29Q5VYK3 1845 aa19.4■□□□□ 0.7
CCNF-204ENST00000564333 LIG1P18858 919 aa19.4■□□□□ 0.7
CCNF-204ENST00000564333 CHRNDQ07001 517 aa19.4■□□□□ 0.7
CCNF-204ENST00000564333 TRDNQ13061 729 aa19.4■□□□□ 0.7
CCNF-204ENST00000564333 MAGEB6Q8N7X4 407 aa19.4■□□□□ 0.7
CCNF-204ENST00000564333 NGLY1Q96IV0 654 aa19.39■□□□□ 0.7
CCNF-204ENST00000564333 STRBPQ96SI9 672 aaKnown RBP19.39■□□□□ 0.7
CCNF-204ENST00000564333 MAP7D2Q96T17 732 aa19.39■□□□□ 0.7
CCNF-204ENST00000564333 NUP62CLQ9H1M0 184 aa19.39■□□□□ 0.7
CCNF-204ENST00000564333 CFAP45Q9UL16 551 aa19.39■□□□□ 0.7
CCNF-204ENST00000564333 ERFEQ4G0M1 354 aa19.39■□□□□ 0.69
CCNF-204ENST00000564333 PDCL3Q9H2J4 239 aa19.39■□□□□ 0.69
CCNF-204ENST00000564333 MBD4O95243 580 aa19.38■□□□□ 0.69
CCNF-204ENST00000564333 BCAMP50895 628 aa19.38■□□□□ 0.69
CCNF-204ENST00000564333 HPS5Q9UPZ3 1129 aa19.38■□□□□ 0.69
CCNF-204ENST00000564333 DHX16O60231 1041 aaKnown RBP19.37■□□□□ 0.69
CCNF-204ENST00000564333 PPFIA3O75145 1194 aa19.37■□□□□ 0.69
CCNF-204ENST00000564333 BICD2Q8TD16 824 aa19.37■□□□□ 0.69
CCNF-204ENST00000564333 DDX19AQ9NUU7 478 aaKnown RBP19.37■□□□□ 0.69
CCNF-204ENST00000564333 FDPSP14324 419 aaKnown RBP19.37■□□□□ 0.69
CCNF-204ENST00000564333 KCNQ4P56696 695 aa19.37■□□□□ 0.69
CCNF-204ENST00000564333 ALX1Q15699 326 aa19.37■□□□□ 0.69
CCNF-204ENST00000564333 PGBD1Q96JS3 809 aa19.37■□□□□ 0.69
CCNF-204ENST00000564333 EPB41L4AQ9HCS5 686 aaPredicted RBP19.37■□□□□ 0.69
CCNF-204ENST00000564333 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.37■□□□□ 0.69
CCNF-204ENST00000564333 DENND2AQ9ULE3 1009 aa19.37■□□□□ 0.69
CCNF-204ENST00000564333 NEDD4P46934 1319 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 RGL2O15211 777 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 GUCY1B3Q02153 619 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 MAP3K11Q16584 847 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 C3orf67Q6ZVT6 689 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 CYB5R4Q7L1T6 521 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 ANKRD18AQ8IVF6 992 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 DACT1Q9NYF0 836 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 ANGEL1Q9UNK9 670 aaKnown RBP19.36■□□□□ 0.69
CCNF-204ENST00000564333 TAF1LQ8IZX4 1826 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 MYH13Q9UKX3 1938 aa19.36■□□□□ 0.69
CCNF-204ENST00000564333 SH2B2O14492 632 aaPredicted RBP19.35■□□□□ 0.69
CCNF-204ENST00000564333 PTMAP06454 111 aaKnown RBP19.35■□□□□ 0.69
CCNF-204ENST00000564333 ADD1P35611 737 aaKnown RBP19.35■□□□□ 0.69
CCNF-204ENST00000564333 SF3B3Q15393 1217 aaKnown RBP19.35■□□□□ 0.69
CCNF-204ENST00000564333 RAB11FIP4Q86YS3 637 aa19.35■□□□□ 0.69
CCNF-204ENST00000564333 NAPBQ9H115 298 aa19.35■□□□□ 0.69
CCNF-204ENST00000564333 ARMT1Q9H993 441 aa19.35■□□□□ 0.69
CCNF-204ENST00000564333 LY75O60449 1722 aa19.35■□□□□ 0.69
CCNF-204ENST00000564333 PATL2C9JE40 543 aaKnown RBP19.35■□□□□ 0.69
CCNF-204ENST00000564333 CPLX1O14810 134 aa19.35■□□□□ 0.69
CCNF-204ENST00000564333 CCDC192P0DO97 292 aa19.35■□□□□ 0.69
CCNF-204ENST00000564333 MTERF4Q7Z6M4 381 aaKnown RBP19.35■□□□□ 0.69
CCNF-204ENST00000564333 ZNF396Q96N95 335 aaPredicted RBP19.35■□□□□ 0.69
CCNF-204ENST00000564333 ZNF804BA4D1E1 1349 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 B4E1Z4 1266 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 ATL3Q6DD88 541 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 BICDL1Q6ZP65 573 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 IFNL3Q8IZI9 196 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 TNMDQ9H2S6 317 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 CLSTN2Q9H4D0 955 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 COL1A1P02452 1464 aaPredicted RBP19.34■□□□□ 0.69
CCNF-204ENST00000564333 PNPLA7Q6ZV29 1317 aa19.34■□□□□ 0.69
CCNF-204ENST00000564333 CEBPZQ03701 1054 aaKnown RBP19.33■□□□□ 0.69
CCNF-204ENST00000564333 TBC1D9BQ66K14 1250 aa19.33■□□□□ 0.69
CCNF-204ENST00000564333 PTF1AQ7RTS3 328 aa19.33■□□□□ 0.69
CCNF-204ENST00000564333 NKX2-3Q8TAU0 364 aa19.33■□□□□ 0.69
CCNF-204ENST00000564333 FTOQ9C0B1 505 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCNF-204ENST00000564333 ORC3Q9UBD5 711 aaPredicted RBP19.33■□□□□ 0.69
CCNF-204ENST00000564333 USP25Q9UHP3 1055 aa19.33■□□□□ 0.69
CCNF-204ENST00000564333 GNAT2P19087 354 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 KIAA2012Q0VF49 1180 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 CAMK4Q16566 473 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 ILDR1Q86SU0 546 aaPredicted RBP19.33■□□□□ 0.68
CCNF-204ENST00000564333 FNBP4Q8N3X1 1017 aaPredicted RBP19.33■□□□□ 0.68
CCNF-204ENST00000564333 LCORLQ8N3X6 602 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 C8orf76Q96K31 380 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 TMEM87BQ96K49 555 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 USP28Q96RU2 1077 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 BCL2L12Q9HB09 334 aa19.33■□□□□ 0.68
CCNF-204ENST00000564333 CACNA1SQ13698 1873 aa19.32■□□□□ 0.68
CCNF-204ENST00000564333 NR1I2O75469 434 aa19.32■□□□□ 0.68
CCNF-204ENST00000564333 RC3H1Q5TC82 1133 aaKnown RBP19.32■□□□□ 0.68
CCNF-204ENST00000564333 BSDC1Q9NW68 430 aaPredicted RBP19.32■□□□□ 0.68
CCNF-204ENST00000564333 LRP2BPQ9P2M1 347 aa19.32■□□□□ 0.68
CCNF-204ENST00000564333 RCOR1Q9UKL0 485 aa19.32■□□□□ 0.68
CCNF-204ENST00000564333 GSG1L2A8MUP6 293 aa19.31■□□□□ 0.68
CCNF-204ENST00000564333 GTF2E1P29083 439 aaPredicted RBP19.31■□□□□ 0.68
CCNF-204ENST00000564333 METAP2P50579 478 aaKnown RBP eCLIP19.31■□□□□ 0.68
CCNF-204ENST00000564333 UBE4AQ14139 1066 aa19.31■□□□□ 0.68
CCNF-204ENST00000564333 RBM43Q6ZSC3 357 aaKnown RBP19.31■□□□□ 0.68
CCNF-204ENST00000564333 SMIM5Q71RC9 77 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms