RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TNNI3KQ59H18 835 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 C8orf37Q96NL8 207 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 CCDC113Q9H0I3 377 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 FPGT-TNNI3KV9GXZ4 949 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 MYO1BO43795 1136 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 GPTP24298 496 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 CALRP27797 417 aaKnown RBP14.34□□□□□ -0.11
COMMD4-209ENST00000564068 CT47A1Q5JQC4 288 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-209ENST00000564068 MYSM1Q5VVJ2 828 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 PDE11AQ9HCR9 933 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 MYO6Q9UM54 1294 aa14.34□□□□□ -0.11
COMMD4-209ENST00000564068 HSF2BPO75031 334 aa14.33□□□□□ -0.11
COMMD4-209ENST00000564068 SCRN1Q12765 414 aa14.33□□□□□ -0.11
COMMD4-209ENST00000564068 CEP57Q86XR8 500 aa14.33□□□□□ -0.11
COMMD4-209ENST00000564068 FAM76AQ8TAV0 307 aa14.33□□□□□ -0.11
COMMD4-209ENST00000564068 AFAP1L1Q8TED9 768 aa14.33□□□□□ -0.11
COMMD4-209ENST00000564068 PHKBQ93100 1093 aa14.33□□□□□ -0.11
COMMD4-209ENST00000564068 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.11
COMMD4-209ENST00000564068 ZNF335Q9H4Z2 1342 aaPredicted RBP14.33□□□□□ -0.11
COMMD4-209ENST00000564068 NLRP1Q9C000 1473 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 CKAP4Q07065 602 aaKnown RBP14.33□□□□□ -0.12
COMMD4-209ENST00000564068 ZNF827Q17R98 1081 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 MFSD6Q6ZSS7 791 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 CABLES1Q8TDN4 633 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 CWC25Q9NXE8 425 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-209ENST00000564068 MAPK8IP1Q9UQF2 711 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 TRPM2O94759 1503 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 MAP3K12Q12852 859 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 ZNF589Q86UQ0 364 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-209ENST00000564068 NAPGQ99747 312 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-209ENST00000564068 UBXN1Q04323 297 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 CCDC178Q5BJE1 867 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 CCDC122Q5T0U0 273 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 PGBD1Q96JS3 809 aa14.33□□□□□ -0.12
COMMD4-209ENST00000564068 ANKRD65E5RJM6 399 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 UBA7P41226 1012 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 SPECC1LQ69YQ0 1117 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 PI4K2BQ8TCG2 481 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 HINFPQ9BQA5 517 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 EPC1Q9H2F5 836 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 TLR7Q9NYK1 1049 aaKnown RBP14.32□□□□□ -0.12
COMMD4-209ENST00000564068 MLH3Q9UHC1 1453 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 CYLC1P35663 651 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-209ENST00000564068 IFFO1Q0D2I5 559 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 CNGA4Q8IV77 575 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 CTCFLQ8NI51 663 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-209ENST00000564068 CLIC4Q9Y696 253 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 MORC2Q9Y6X9 1032 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-209ENST00000564068 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
COMMD4-209ENST00000564068 TRIM75PA6NK02 468 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 CDC25BP30305 580 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 RTN1Q16799 776 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 MYL10Q9BUA6 226 aa14.32□□□□□ -0.12
COMMD4-209ENST00000564068 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.32□□□□□ -0.12
COMMD4-209ENST00000564068 KRT86O43790 486 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 WTAPQ15007 396 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 AKAP4Q5JQC9 854 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 EHBP1Q8NDI1 1231 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 STAMQ92783 540 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 ALS2CR12Q96Q35 445 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 TAF5LO75529 589 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 ZFYP08048 801 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-209ENST00000564068 SNRPA1P09661 255 aaKnown RBP14.31□□□□□ -0.12
COMMD4-209ENST00000564068 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 IDEP14735 1019 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-209ENST00000564068 SPAG1Q07617 926 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 KBTBD3Q8NAB2 608 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 ANKRD7Q92527 254 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 MACROD2A1Z1Q3 448 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 E7EWF7 191 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 HOXC9P31274 260 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 BEND3Q5T5X7 828 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 PPM1EQ8WY54 764 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 TTC14Q96N46 770 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 SLF1Q9BQI6 1058 aa14.31□□□□□ -0.12
COMMD4-209ENST00000564068 LUC7L2Q9Y383 392 aaKnown RBP14.31□□□□□ -0.12
COMMD4-209ENST00000564068 TUBBP07437 444 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 KIF5AQ12840 1032 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 NECTIN1Q15223 517 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 LONRF2Q1L5Z9 754 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 IQCA1Q86XH1 822 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 DDX17Q92841 729 aaKnown RBP14.3□□□□□ -0.12
COMMD4-209ENST00000564068 ZKSCAN3Q9BRR0 538 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 CABP5Q9NP86 173 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 NFATC2IPQ8NCF5 419 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 DDX21Q9NR30 783 aaKnown RBP eCLIP14.3□□□□□ -0.12
COMMD4-209ENST00000564068 RCOR1Q9UKL0 485 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 B4E1Z4 1266 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 CYP21A2P08686 494 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 TUBB4BP68371 445 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 KRT40Q6A162 431 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 PLA2G4DQ86XP0 818 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 CLIC6Q96NY7 704 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 ORAI2Q96SN7 254 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 SEPT11Q9NVA2 429 aaKnown RBP14.3□□□□□ -0.12
COMMD4-209ENST00000564068 NDUFAB1O14561 156 aa14.3□□□□□ -0.12
COMMD4-209ENST00000564068 KRT9P35527 623 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms