RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 GRIA4P48058 902 aa8.2□□□□□ -1.1
SMG1-206ENST00000562668 TOP2AP11388 1531 aaKnown RBP8.19□□□□□ -1.1
SMG1-206ENST00000562668 CPNE3O75131 537 aaKnown RBP8.19□□□□□ -1.1
SMG1-206ENST00000562668 DLGAP3O95886 979 aa8.19□□□□□ -1.1
SMG1-206ENST00000562668 PDE4CQ08493 712 aa8.19□□□□□ -1.1
SMG1-206ENST00000562668 ORC1Q13415 861 aa8.19□□□□□ -1.1
SMG1-206ENST00000562668 SPRED3Q2MJR0 410 aa8.19□□□□□ -1.1
SMG1-206ENST00000562668 SGO2Q562F6 1265 aa8.19□□□□□ -1.1
SMG1-206ENST00000562668 CITED4Q96RK1 184 aa8.19□□□□□ -1.1
SMG1-206ENST00000562668 SUPT5HO00267 1087 aaKnown RBP8.18□□□□□ -1.1
SMG1-206ENST00000562668 MAP4P27816 1152 aaKnown RBP8.18□□□□□ -1.1
SMG1-206ENST00000562668 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
SMG1-206ENST00000562668 C12orf50Q8NA57 414 aaPredicted RBP8.18□□□□□ -1.1
SMG1-206ENST00000562668 NPHS2Q9NP85 383 aa8.18□□□□□ -1.1
SMG1-206ENST00000562668 GPR182O15218 404 aa8.17□□□□□ -1.1
SMG1-206ENST00000562668 MED26O95402 600 aa8.17□□□□□ -1.1
SMG1-206ENST00000562668 GRIK1P39086 918 aa8.17□□□□□ -1.1
SMG1-206ENST00000562668 SHKBP1Q8TBC3 707 aa8.17□□□□□ -1.1
SMG1-206ENST00000562668 PRR19A6NJB7 356 aa8.16□□□□□ -1.1
SMG1-206ENST00000562668 IGHA2P01877 340 aa8.16□□□□□ -1.1
SMG1-206ENST00000562668 RXRBP28702 533 aa8.16□□□□□ -1.1
SMG1-206ENST00000562668 ZNF423Q2M1K9 1284 aa8.16□□□□□ -1.1
SMG1-206ENST00000562668 EXOSC6Q5RKV6 272 aaKnown RBP8.16□□□□□ -1.1
SMG1-206ENST00000562668 INTS5Q6P9B9 1019 aaKnown RBP8.16□□□□□ -1.1
SMG1-206ENST00000562668 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
SMG1-206ENST00000562668 EHD4Q9H223 541 aa8.16□□□□□ -1.1
SMG1-206ENST00000562668 ZNF576Q9H609 170 aa8.16□□□□□ -1.1
SMG1-206ENST00000562668 B3GALT4O96024 378 aa8.15□□□□□ -1.1
SMG1-206ENST00000562668 SPINK2P20155 84 aa8.15□□□□□ -1.1
SMG1-206ENST00000562668 ITPKAP23677 461 aa8.15□□□□□ -1.1
SMG1-206ENST00000562668 HP1BP3Q5SSJ5 553 aaPredicted RBP8.15□□□□□ -1.1
SMG1-206ENST00000562668 C2CD4AQ8NCU7 369 aaPredicted RBP8.15□□□□□ -1.1
SMG1-206ENST00000562668 MFSD14AQ96MC6 490 aa8.15□□□□□ -1.1
SMG1-206ENST00000562668 DNAJC25Q9H1X3 360 aa8.15□□□□□ -1.1
SMG1-206ENST00000562668 EIF1AYO14602 144 aaKnown RBP8.14□□□□□ -1.11
SMG1-206ENST00000562668 CYP11A1P05108 521 aa8.14□□□□□ -1.11
SMG1-206ENST00000562668 CTSBP07858 339 aa8.14□□□□□ -1.11
SMG1-206ENST00000562668 ADH5P11766 374 aa8.14□□□□□ -1.11
SMG1-206ENST00000562668 DRD2P14416 443 aa8.14□□□□□ -1.11
SMG1-206ENST00000562668 MAOBP27338 520 aa8.14□□□□□ -1.11
SMG1-206ENST00000562668 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
SMG1-206ENST00000562668 TMC1Q8TDI8 760 aa8.14□□□□□ -1.11
SMG1-206ENST00000562668 TRIM56Q9BRZ2 755 aaKnown RBP8.14□□□□□ -1.11
SMG1-206ENST00000562668 ABCB6Q9NP58 842 aa8.14□□□□□ -1.11
SMG1-206ENST00000562668 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
SMG1-206ENST00000562668 USP11P51784 963 aa8.13□□□□□ -1.11
SMG1-206ENST00000562668 SOX4Q06945 474 aaPredicted RBP8.13□□□□□ -1.11
SMG1-206ENST00000562668 POU4F3Q15319 338 aa8.13□□□□□ -1.11
SMG1-206ENST00000562668 DDX54Q8TDD1 881 aaKnown RBP8.13□□□□□ -1.11
SMG1-206ENST00000562668 CCDC74AQ96AQ1 378 aa8.13□□□□□ -1.11
SMG1-206ENST00000562668 ALKBH8Q96BT7 664 aaKnown RBP8.13□□□□□ -1.11
SMG1-206ENST00000562668 DMRTB1Q96MA1 342 aa8.13□□□□□ -1.11
SMG1-206ENST00000562668 YIPF2Q9BWQ6 316 aa8.13□□□□□ -1.11
SMG1-206ENST00000562668 RBCK1Q9BYM8 510 aa8.13□□□□□ -1.11
SMG1-206ENST00000562668 FAM95CA0A1B0GW59 222 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 SOWAHDA6NJG2 315 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 PTPN12Q05209 780 aaKnown RBP8.12□□□□□ -1.11
SMG1-206ENST00000562668 CDPF1Q6NVV7 123 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 PAOXQ6QHF9 649 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 FBLIM1Q8WUP2 373 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 NIF3L1Q9GZT8 377 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 ZFYVE1Q9HBF4 777 aa8.12□□□□□ -1.11
SMG1-206ENST00000562668 GADD45BO75293 160 aaPredicted RBP8.11□□□□□ -1.11
SMG1-206ENST00000562668 CPSF6Q16630 551 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMG1-206ENST00000562668 DTX1Q86Y01 620 aa8.11□□□□□ -1.11
SMG1-206ENST00000562668 CSRNP1Q96S65 589 aa8.11□□□□□ -1.11
SMG1-206ENST00000562668 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
SMG1-206ENST00000562668 ACTL7BQ9Y614 415 aa8.11□□□□□ -1.11
SMG1-206ENST00000562668 F13BP05160 661 aa8.1□□□□□ -1.11
SMG1-206ENST00000562668 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
SMG1-206ENST00000562668 EZH1Q92800 747 aaPredicted RBP8.1□□□□□ -1.11
SMG1-206ENST00000562668 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
SMG1-206ENST00000562668 PIM2Q9P1W9 311 aa8.1□□□□□ -1.11
SMG1-206ENST00000562668 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
SMG1-206ENST00000562668 GNEQ9Y223 722 aaKnown RBP8.1□□□□□ -1.11
SMG1-206ENST00000562668 NESP48681 1621 aa8.1□□□□□ -1.11
SMG1-206ENST00000562668 CCDC88BA6NC98 1476 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 ECEL1O95672 775 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 GP2P55259 537 aaKnown RBP8.09□□□□□ -1.11
SMG1-206ENST00000562668 AP3B2Q13367 1082 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 NFKBIBQ15653 356 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 RPS26P11Q5JNZ5 115 aaPredicted RBP8.09□□□□□ -1.11
SMG1-206ENST00000562668 AKAP4Q5JQC9 854 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 MCTP1Q6DN14 999 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 OSBPL1AQ9BXW6 950 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 AP4E1Q9UPM8 1137 aa8.09□□□□□ -1.11
SMG1-206ENST00000562668 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
SMG1-206ENST00000562668 RAB6AP20340 208 aa8.08□□□□□ -1.12
SMG1-206ENST00000562668 GRM2Q14416 872 aa8.08□□□□□ -1.12
SMG1-206ENST00000562668 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
SMG1-206ENST00000562668 METTL22Q9BUU2 404 aaPredicted RBP8.08□□□□□ -1.12
SMG1-206ENST00000562668 PRKAG2Q9UGJ0 569 aa8.08□□□□□ -1.12
SMG1-206ENST00000562668 LEMD3Q9Y2U8 911 aa8.08□□□□□ -1.12
SMG1-206ENST00000562668 OAS3Q9Y6K5 1087 aaKnown RBP8.08□□□□□ -1.12
SMG1-206ENST00000562668 LAMC3Q9Y6N6 1575 aa8.08□□□□□ -1.12
SMG1-206ENST00000562668 ADAMTS4O75173 837 aa8.07□□□□□ -1.12
SMG1-206ENST00000562668 HOXA10P31260 410 aaPredicted RBP8.07□□□□□ -1.12
SMG1-206ENST00000562668 PDE3AQ14432 1141 aa8.07□□□□□ -1.12
SMG1-206ENST00000562668 TMC7Q7Z402 723 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms