RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 SPINT1O43278 529 aa8.61□□□□□ -1.03
TCF4-213ENST00000562543 RELBQ01201 579 aa8.61□□□□□ -1.03
TCF4-213ENST00000562543 NFIXQ14938 502 aa8.61□□□□□ -1.03
TCF4-213ENST00000562543 INSM2Q96T92 566 aaPredicted RBP8.61□□□□□ -1.03
TCF4-213ENST00000562543 ZNF277Q9NRM2 450 aaPredicted RBP8.61□□□□□ -1.03
TCF4-213ENST00000562543 ATG3Q9NT62 314 aa8.61□□□□□ -1.03
TCF4-213ENST00000562543 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
TCF4-213ENST00000562543 FKBPLQ9UIM3 349 aa8.61□□□□□ -1.03
TCF4-213ENST00000562543 COL4A5P29400 1685 aa8.61□□□□□ -1.03
TCF4-213ENST00000562543 RPTORQ8N122 1335 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 TBC1D8O95759 1140 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 SERPINB2P05120 415 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 FKBP4Q02790 459 aaKnown RBP eCLIP8.6□□□□□ -1.03
TCF4-213ENST00000562543 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 EPS8L1Q8TE68 723 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 GPKOWQ92917 476 aaPredicted RBP eCLIP8.6□□□□□ -1.03
TCF4-213ENST00000562543 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
TCF4-213ENST00000562543 ADAMTS8Q9UP79 889 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 TJP1Q07157 1748 aa8.6□□□□□ -1.03
TCF4-213ENST00000562543 LOC100996750A0A140TA64 210 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 ZNF157P51786 506 aaPredicted RBP8.59□□□□□ -1.03
TCF4-213ENST00000562543 RAB15P59190 212 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 INTS6LQ5JSJ4 861 aaKnown RBP8.59□□□□□ -1.03
TCF4-213ENST00000562543 PRPF40BQ6NWY9 871 aaKnown RBP8.59□□□□□ -1.03
TCF4-213ENST00000562543 ZBTB33Q86T24 672 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 WHAMMQ8TF30 809 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 RAPGEF4Q8WZA2 1011 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 SLC10A4Q96EP9 437 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 KRTAP4-6Q9BYQ5 205 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 TMOD3Q9NYL9 352 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 PGAP2Q9UHJ9 254 aa8.59□□□□□ -1.03
TCF4-213ENST00000562543 MRC1P22897 1456 aa8.58□□□□□ -1.04
TCF4-213ENST00000562543 PKD1L2Q7Z442 2459 aa8.58□□□□□ -1.04
TCF4-213ENST00000562543 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
TCF4-213ENST00000562543 TATP17735 454 aaPredicted RBP8.58□□□□□ -1.04
TCF4-213ENST00000562543 CCDC93Q567U6 631 aa8.58□□□□□ -1.04
TCF4-213ENST00000562543 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
TCF4-213ENST00000562543 C7orf43Q8WVR3 580 aa8.58□□□□□ -1.04
TCF4-213ENST00000562543 ADARB2Q9NS39 739 aaKnown RBP8.58□□□□□ -1.04
TCF4-213ENST00000562543 GJA3Q9Y6H8 435 aa8.58□□□□□ -1.04
TCF4-213ENST00000562543 CDC14CA4D256 554 aa8.57□□□□□ -1.04
TCF4-213ENST00000562543 FKTNO75072 461 aa8.57□□□□□ -1.04
TCF4-213ENST00000562543 IARSP41252 1262 aaKnown RBP8.57□□□□□ -1.04
TCF4-213ENST00000562543 SUZ12Q15022 739 aaKnown RBP8.57□□□□□ -1.04
TCF4-213ENST00000562543 NBPF6Q5VWK0 638 aa8.57□□□□□ -1.04
TCF4-213ENST00000562543 USHBP1Q8N6Y0 703 aa8.57□□□□□ -1.04
TCF4-213ENST00000562543 CNKSR1Q969H4 720 aa8.57□□□□□ -1.04
TCF4-213ENST00000562543 NBPF4Q96M43 638 aa8.57□□□□□ -1.04
TCF4-213ENST00000562543 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
TCF4-213ENST00000562543 CDH23Q9H251 3354 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 PDE6BP35913 854 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 CRKLP46109 303 aaKnown RBP8.56□□□□□ -1.04
TCF4-213ENST00000562543 ZNF385CQ66K41 422 aaPredicted RBP8.56□□□□□ -1.04
TCF4-213ENST00000562543 CDC37L1Q7L3B6 337 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 OTOP1Q7RTM1 612 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 RASAL3Q86YV0 1011 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 ADAM32Q8TC27 787 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
TCF4-213ENST00000562543 BRIP1Q9BX63 1249 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 CFHR5Q9BXR6 569 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 GBA2Q9HCG7 927 aaPredicted RBP8.56□□□□□ -1.04
TCF4-213ENST00000562543 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
TCF4-213ENST00000562543 TRIM17Q9Y577 477 aa8.56□□□□□ -1.04
TCF4-213ENST00000562543 SNED1Q8TER0 1413 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
TCF4-213ENST00000562543 AP1G2O75843 785 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 GDF11O95390 407 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 ITGA6P23229 1130 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 HOXC9P31274 260 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 EIF6P56537 245 aaKnown RBP8.55□□□□□ -1.04
TCF4-213ENST00000562543 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 ALYREFQ86V81 257 aaKnown RBP8.55□□□□□ -1.04
TCF4-213ENST00000562543 NME9Q86XW9 330 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 DPF3Q92784 378 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 ZNF333Q96JL9 665 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 KDM3BQ7LBC6 1761 aa8.55□□□□□ -1.04
TCF4-213ENST00000562543 MUC6Q6W4X9 2439 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 ADD1P35611 737 aaKnown RBP8.54□□□□□ -1.04
TCF4-213ENST00000562543 SKIV2LQ15477 1246 aaKnown RBP8.54□□□□□ -1.04
TCF4-213ENST00000562543 TMEM151AQ8N4L1 468 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 GUCD1Q96NT3 240 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 HMX1Q9NP08 348 aaPredicted RBP8.54□□□□□ -1.04
TCF4-213ENST00000562543 GPRC5DQ9NZD1 345 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 NCOR1O75376 2440 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 ZNF609O15014 1411 aa8.54□□□□□ -1.04
TCF4-213ENST00000562543 SBNO2Q9Y2G9 1366 aa8.53□□□□□ -1.04
TCF4-213ENST00000562543 PTK2Q05397 1052 aa8.53□□□□□ -1.04
TCF4-213ENST00000562543 DHX9Q08211 1270 aaKnown RBP8.53□□□□□ -1.04
TCF4-213ENST00000562543 LRIT3Q3SXY7 679 aa8.53□□□□□ -1.04
TCF4-213ENST00000562543 DLK2Q6UY11 383 aa8.53□□□□□ -1.04
TCF4-213ENST00000562543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.53□□□□□ -1.04
TCF4-213ENST00000562543 SVOPQ8N4V2 548 aa8.53□□□□□ -1.04
TCF4-213ENST00000562543 C2orf69Q8N8R5 385 aa8.53□□□□□ -1.04
TCF4-213ENST00000562543 RNF217Q8TC41 542 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms