RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 IL27Q8NEV9 243 aa17.06■□□□□ 0.32
CNN2-204ENST00000562075 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
CNN2-204ENST00000562075 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
CNN2-204ENST00000562075 STRBPQ96SI9 672 aaKnown RBP17.06■□□□□ 0.32
CNN2-204ENST00000562075 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
CNN2-204ENST00000562075 ARMT1Q9H993 441 aa17.06■□□□□ 0.32
CNN2-204ENST00000562075 KIAA1551Q9HCM1 1747 aa17.06■□□□□ 0.32
CNN2-204ENST00000562075 MAGEB6P1A0A0J9YX57 407 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 CD2BP2O95400 341 aaKnown RBP17.05■□□□□ 0.32
CNN2-204ENST00000562075 PSMA5P28066 241 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 KRT32Q14532 448 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 MIGA1Q8NAN2 632 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 UPF3BQ9BZI7 483 aaKnown RBP17.05■□□□□ 0.32
CNN2-204ENST00000562075 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
CNN2-204ENST00000562075 CCDC88AQ3V6T2 1871 aa17.05■□□□□ 0.32
CNN2-204ENST00000562075 FAM205AQ6ZU69 1335 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 K7ELQ4 463 aaPredicted RBP17.04■□□□□ 0.32
CNN2-204ENST00000562075 FOXP2O15409 715 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 APPP05067 770 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 CYP21A2P08686 494 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 GNAT2P19087 354 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
CNN2-204ENST00000562075 GSTO1P78417 241 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 DOK7Q18PE1 504 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 TSGA10IPQ3SY00 556 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 TBC1D22AQ8WUA7 517 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 FBXW7Q969H0 707 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 PIM2Q9P1W9 311 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
CNN2-204ENST00000562075 GTF2IP78347 998 aa17.03■□□□□ 0.32
CNN2-204ENST00000562075 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
CNN2-204ENST00000562075 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
CNN2-204ENST00000562075 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
CNN2-204ENST00000562075 CYP46A1Q9Y6A2 500 aa17.03■□□□□ 0.32
CNN2-204ENST00000562075 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.32
CNN2-204ENST00000562075 PATL2C9JE40 543 aaKnown RBP17.02■□□□□ 0.32
CNN2-204ENST00000562075 FGAP02671 866 aa17.02■□□□□ 0.32
CNN2-204ENST00000562075 MCM2P49736 904 aa17.02■□□□□ 0.32
CNN2-204ENST00000562075 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
CNN2-204ENST00000562075 MFSD14BQ5SR56 506 aa17.02■□□□□ 0.32
CNN2-204ENST00000562075 SOGA3Q5TF21 947 aa17.02■□□□□ 0.32
CNN2-204ENST00000562075 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.32
CNN2-204ENST00000562075 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.32
CNN2-204ENST00000562075 SLC4A4Q9Y6R1 1079 aa17.02■□□□□ 0.32
CNN2-204ENST00000562075 PTGER2P43116 358 aa17.01■□□□□ 0.31
CNN2-204ENST00000562075 ALX1Q15699 326 aa17.01■□□□□ 0.31
CNN2-204ENST00000562075 DALRD3Q5D0E6 543 aaKnown RBP17.01■□□□□ 0.31
CNN2-204ENST00000562075 TTLL5Q6EMB2 1281 aa17.01■□□□□ 0.31
CNN2-204ENST00000562075 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
CNN2-204ENST00000562075 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
CNN2-204ENST00000562075 DBNDD1Q9H9R9 158 aa17.01■□□□□ 0.31
CNN2-204ENST00000562075 ZSWIM6Q9HCJ5 1215 aa17.01■□□□□ 0.31
CNN2-204ENST00000562075 ZMYM6O95789 1325 aa17■□□□□ 0.31
CNN2-204ENST00000562075 PPIP5K2O43314 1243 aa17■□□□□ 0.31
CNN2-204ENST00000562075 ECE2O60344 883 aa17■□□□□ 0.31
CNN2-204ENST00000562075 LDHCP07864 332 aa17■□□□□ 0.31
CNN2-204ENST00000562075 DYNLL1P63167 89 aaKnown RBP17■□□□□ 0.31
CNN2-204ENST00000562075 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
CNN2-204ENST00000562075 GRIK5Q16478 980 aa17■□□□□ 0.31
CNN2-204ENST00000562075 AOC3Q16853 763 aa17■□□□□ 0.31
CNN2-204ENST00000562075 RUFY3Q7L099 469 aa17■□□□□ 0.31
CNN2-204ENST00000562075 PODNQ7Z5L7 613 aa17■□□□□ 0.31
CNN2-204ENST00000562075 PSMD1Q99460 953 aa17■□□□□ 0.31
CNN2-204ENST00000562075 RIOK1Q9BRS2 568 aaKnown RBP17■□□□□ 0.31
CNN2-204ENST00000562075 NOL10Q9BSC4 688 aaKnown RBP17■□□□□ 0.31
CNN2-204ENST00000562075 NAPBQ9H115 298 aa17■□□□□ 0.31
CNN2-204ENST00000562075 PDRG1Q9NUG6 133 aa17■□□□□ 0.31
CNN2-204ENST00000562075 CHD4Q14839 1912 aa17■□□□□ 0.31
CNN2-204ENST00000562075 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 ZNF213O14771 459 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 PRKAB2O43741 272 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 HSP90AA1P07900 732 aaKnown RBP16.99■□□□□ 0.31
CNN2-204ENST00000562075 CPA1P15085 419 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 TDO2P48775 406 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 HAND2P61296 217 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 SLF2Q8IX21 1173 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 IFNL3Q8IZI9 196 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 TTC14Q96N46 770 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 NEK1Q96PY6 1258 aa16.99■□□□□ 0.31
CNN2-204ENST00000562075 EPB41L4AQ9HCS5 686 aaPredicted RBP16.99■□□□□ 0.31
CNN2-204ENST00000562075 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 E7EWF7 191 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 DIXDC1Q155Q3 683 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 NOL8Q76FK4 1167 aaKnown RBP16.98■□□□□ 0.31
CNN2-204ENST00000562075 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
CNN2-204ENST00000562075 SPON1Q9HCB6 807 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 AATFQ9NY61 560 aaKnown RBP eCLIP16.98■□□□□ 0.31
CNN2-204ENST00000562075 SUGT1Q9Y2Z0 365 aa16.98■□□□□ 0.31
CNN2-204ENST00000562075 BRCA1P38398 1863 aaKnown RBP16.98■□□□□ 0.31
CNN2-204ENST00000562075 MROH7-TTC4A0A0A0MT08 1334 aa16.97■□□□□ 0.31
CNN2-204ENST00000562075 HMGB1P09429 215 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms