RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 TTF2Q9UNY4 1162 aaKnown RBP23.25■■□□□ 1.31
COMMD4-204ENST00000561662 MAP3K9P80192 1104 aa23.24■■□□□ 1.31
COMMD4-204ENST00000561662 TNFAIP1Q13829 316 aa23.24■■□□□ 1.31
COMMD4-204ENST00000561662 MTFR1Q15390 333 aa23.24■■□□□ 1.31
COMMD4-204ENST00000561662 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
COMMD4-204ENST00000561662 DPF3Q92784 378 aa23.24■■□□□ 1.31
COMMD4-204ENST00000561662 CHMP4AQ9BY43 222 aa23.24■■□□□ 1.31
COMMD4-204ENST00000561662 FKBP1AP62942 108 aaKnown RBP23.23■■□□□ 1.31
COMMD4-204ENST00000561662 IFIT5Q13325 482 aaKnown RBP23.23■■□□□ 1.31
COMMD4-204ENST00000561662 CSADQ9Y600 493 aa23.23■■□□□ 1.31
COMMD4-204ENST00000561662 A0A1B0GUL6 1792 aa23.22■■□□□ 1.31
COMMD4-204ENST00000561662 LACTBP83111 547 aaPredicted RBP23.22■■□□□ 1.31
COMMD4-204ENST00000561662 FOXO4P98177 505 aa23.22■■□□□ 1.31
COMMD4-204ENST00000561662 DZIP1LQ8IYY4 767 aaKnown RBP23.22■■□□□ 1.31
COMMD4-204ENST00000561662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.22■■□□□ 1.31
COMMD4-204ENST00000561662 SHISA4Q96DD7 197 aa23.22■■□□□ 1.31
COMMD4-204ENST00000561662 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
COMMD4-204ENST00000561662 GYG1P46976 350 aa23.21■■□□□ 1.31
COMMD4-204ENST00000561662 CACNB3P54284 484 aa23.21■■□□□ 1.31
COMMD4-204ENST00000561662 FLIIQ13045 1269 aa23.21■■□□□ 1.31
COMMD4-204ENST00000561662 FKBP5Q13451 457 aaPredicted RBP23.21■■□□□ 1.31
COMMD4-204ENST00000561662 KIF22Q14807 665 aa23.21■■□□□ 1.31
COMMD4-204ENST00000561662 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
COMMD4-204ENST00000561662 DNAAF4Q8WXU2 420 aa23.21■■□□□ 1.31
COMMD4-204ENST00000561662 BTBD19C9JJ37 291 aa23.2■■□□□ 1.3
COMMD4-204ENST00000561662 TLR2O60603 784 aa23.2■■□□□ 1.3
COMMD4-204ENST00000561662 CRKP46108 304 aa23.19■■□□□ 1.3
COMMD4-204ENST00000561662 GRIK5Q16478 980 aa23.19■■□□□ 1.3
COMMD4-204ENST00000561662 ZKSCAN4Q969J2 545 aaPredicted RBP23.19■■□□□ 1.3
COMMD4-204ENST00000561662 SERPINA10Q9UK55 444 aa23.19■■□□□ 1.3
COMMD4-204ENST00000561662 FAM205AQ6ZU69 1335 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 CTGFP29279 349 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 TAF7LQ5H9L4 462 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 EPHA10Q5JZY3 1008 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 LMBR1LQ6UX01 489 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 LINS1Q8NG48 757 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 CNNM1Q9NRU3 951 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 CPA4Q9UI42 421 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 IQSEC3Q9UPP2 1182 aaPredicted RBP23.18■■□□□ 1.3
COMMD4-204ENST00000561662 SNCAIPQ9Y6H5 919 aa23.18■■□□□ 1.3
COMMD4-204ENST00000561662 SPDYE5A6NIY4 337 aa23.17■■□□□ 1.3
COMMD4-204ENST00000561662 DLL1O00548 723 aa23.17■■□□□ 1.3
COMMD4-204ENST00000561662 IRF6O14896 467 aa23.17■■□□□ 1.3
COMMD4-204ENST00000561662 WDHD1O75717 1129 aaPredicted RBP23.17■■□□□ 1.3
COMMD4-204ENST00000561662 CETPP11597 493 aa23.17■■□□□ 1.3
COMMD4-204ENST00000561662 LDHAL6AQ6ZMR3 332 aa23.17■■□□□ 1.3
COMMD4-204ENST00000561662 WRNIP1Q96S55 665 aa23.17■■□□□ 1.3
COMMD4-204ENST00000561662 F6X3S4 739 aa23.16■■□□□ 1.3
COMMD4-204ENST00000561662 TNNI2P48788 182 aa23.16■■□□□ 1.3
COMMD4-204ENST00000561662 TDRD7Q8NHU6 1098 aaKnown RBP23.16■■□□□ 1.3
COMMD4-204ENST00000561662 HIBADHP31937 336 aaKnown RBP23.15■■□□□ 1.3
COMMD4-204ENST00000561662 SLC17A8Q8NDX2 589 aa23.15■■□□□ 1.3
COMMD4-204ENST00000561662 TRIM47Q96LD4 638 aa23.15■■□□□ 1.3
COMMD4-204ENST00000561662 COL6A3P12111 3177 aa23.14■■□□□ 1.3
COMMD4-204ENST00000561662 ARAP2Q8WZ64 1704 aa23.14■■□□□ 1.3
COMMD4-204ENST00000561662 CCER2I3L3R5 266 aa23.14■■□□□ 1.29
COMMD4-204ENST00000561662 PSMC4P43686 418 aa23.14■■□□□ 1.29
COMMD4-204ENST00000561662 CHAF1AQ13111 956 aaPredicted RBP23.14■■□□□ 1.29
COMMD4-204ENST00000561662 SNAPC2Q13487 334 aa23.14■■□□□ 1.29
COMMD4-204ENST00000561662 CCDC57Q2TAC2 916 aa23.14■■□□□ 1.29
COMMD4-204ENST00000561662 ERO1BQ86YB8 467 aa23.14■■□□□ 1.29
COMMD4-204ENST00000561662 FAM84BQ96KN1 310 aaPredicted RBP23.14■■□□□ 1.29
COMMD4-204ENST00000561662 CCL5P13501 91 aa23.12■■□□□ 1.29
COMMD4-204ENST00000561662 OSBPP22059 807 aa23.12■■□□□ 1.29
COMMD4-204ENST00000561662 CCDC184Q52MB2 194 aa23.12■■□□□ 1.29
COMMD4-204ENST00000561662 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.12■■□□□ 1.29
COMMD4-204ENST00000561662 RAET1EQ8TD07 263 aa23.12■■□□□ 1.29
COMMD4-204ENST00000561662 PUS3Q9BZE2 481 aaKnown RBP23.12■■□□□ 1.29
COMMD4-204ENST00000561662 BIN2Q9UBW5 565 aaPredicted RBP23.12■■□□□ 1.29
COMMD4-204ENST00000561662 SRRDQ9UH36 339 aa23.12■■□□□ 1.29
COMMD4-204ENST00000561662 LAMA3Q16787 3333 aa23.12■■□□□ 1.29
COMMD4-204ENST00000561662 FMNL1O95466 1100 aaPredicted RBP23.11■■□□□ 1.29
COMMD4-204ENST00000561662 GRK4P32298 578 aa23.11■■□□□ 1.29
COMMD4-204ENST00000561662 C17orf99Q6UX52 265 aa23.11■■□□□ 1.29
COMMD4-204ENST00000561662 MIGA2Q7L4E1 593 aa23.11■■□□□ 1.29
COMMD4-204ENST00000561662 RNF208Q9H0X6 261 aa23.11■■□□□ 1.29
COMMD4-204ENST00000561662 RIPOR2Q9Y4F9 1068 aa23.11■■□□□ 1.29
COMMD4-204ENST00000561662 A0A0C4DFX4 3053 aa23.11■■□□□ 1.29
COMMD4-204ENST00000561662 GNRH1P01148 92 aa23.1■■□□□ 1.29
COMMD4-204ENST00000561662 PPIL2Q13356 520 aa23.1■■□□□ 1.29
COMMD4-204ENST00000561662 PRMT2P55345 433 aa23.09■■□□□ 1.29
COMMD4-204ENST00000561662 BEND3Q5T5X7 828 aa23.09■■□□□ 1.29
COMMD4-204ENST00000561662 MYPNQ86TC9 1320 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 PDHXO00330 501 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 SOX1O00570 391 aaPredicted RBP23.08■■□□□ 1.29
COMMD4-204ENST00000561662 INPP5BP32019 993 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 GJA8P48165 433 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 UBE4AQ14139 1066 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 UBE2Q1Q7Z7E8 422 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 VPS37DQ86XT2 251 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 HTATIP2Q9BUP3 242 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 PRO3102Q9H379 93 aa23.08■■□□□ 1.29
COMMD4-204ENST00000561662 ZCCHC17Q9NP64 241 aaKnown RBP23.08■■□□□ 1.29
COMMD4-204ENST00000561662 WWC1Q8IX03 1113 aa23.07■■□□□ 1.28
COMMD4-204ENST00000561662 NKX2-3Q8TAU0 364 aa23.07■■□□□ 1.28
COMMD4-204ENST00000561662 TEKT1Q969V4 418 aa23.07■■□□□ 1.28
COMMD4-204ENST00000561662 FRAT2O75474 233 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-204ENST00000561662 GJB1P08034 283 aa23.06■■□□□ 1.28
COMMD4-204ENST00000561662 PRKCZQ05513 592 aa23.06■■□□□ 1.28
COMMD4-204ENST00000561662 LRCH3Q96II8 777 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms