RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
NEIL1-202ENST00000561643 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
NEIL1-202ENST00000561643 PLA2G12BQ9BX93 195 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 A0A087WWV3 80 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 CSF1RP07333 972 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 ENGASEQ8NFI3 743 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 SDF4Q9BRK5 362 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 CNNM1Q9NRU3 951 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 ANO10Q9NW15 660 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 PCDHA7Q9UN72 937 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 ITGA6P23229 1130 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 RTEL1Q9NZ71 1219 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
NEIL1-202ENST00000561643 TRDNQ13061 729 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 PIGBQ92521 554 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 ERCC4Q92889 916 aaPredicted RBP12.75□□□□□ -0.37
NEIL1-202ENST00000561643 GREM2Q9H772 168 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 MAP3K15Q6ZN16 1313 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 PAPPAQ13219 1627 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 A0A1B0GVL5 298 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 MCAMP43121 646 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 CEP57L1Q8IYX8 460 aa12.75□□□□□ -0.37
NEIL1-202ENST00000561643 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
NEIL1-202ENST00000561643 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
NEIL1-202ENST00000561643 UBAP1LF5GYI3 381 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 APPP05067 770 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 ANTXR2P58335 489 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 ZRSR1Q15695 479 aaKnown RBP12.74□□□□□ -0.37
NEIL1-202ENST00000561643 HLFQ16534 295 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 SLC9C2Q5TAH2 1124 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 ADALQ6DHV7 355 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 GIGYF2Q6Y7W6 1299 aaKnown RBP12.74□□□□□ -0.37
NEIL1-202ENST00000561643 NUTM2AQ8IVF1 878 aaPredicted RBP12.74□□□□□ -0.37
NEIL1-202ENST00000561643 FBXO18Q8NFZ0 1043 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 KCNG1Q9UIX4 513 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 HPS5Q9UPZ3 1129 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 RIPOR2Q9Y4F9 1068 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
NEIL1-202ENST00000561643 CDC25BP30305 580 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 CCDC144BQ3MJ40 725 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 SARM1Q6SZW1 724 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 CCDC144CPQ8IYA2 1237 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
NEIL1-202ENST00000561643 SYNE3Q6ZMZ3 975 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 NLRP10Q86W26 655 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 LINC00301Q8NCQ3 95 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 KCNG4Q8TDN1 519 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 CACTINQ8WUQ7 758 aaKnown RBP12.73□□□□□ -0.37
NEIL1-202ENST00000561643 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
NEIL1-202ENST00000561643 NAT10Q9H0A0 1025 aaKnown RBP12.73□□□□□ -0.37
NEIL1-202ENST00000561643 GJB4Q9NTQ9 266 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 RIC1Q4ADV7 1423 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 CCDC66A2RUB6 948 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 FMR1NBQ8N0W7 255 aaPredicted RBP12.73□□□□□ -0.37
NEIL1-202ENST00000561643 TIGD1Q96MW7 591 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 DDX41Q9UJV9 622 aaKnown RBP12.73□□□□□ -0.37
NEIL1-202ENST00000561643 MYH15Q9Y2K3 1946 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 A0A1W2PQ27 194 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 A0A1W2PQ64 194 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 A0A1W2PQD8 194 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 ADD2P35612 726 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 NDUFA8P51970 172 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 CTSWP56202 376 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 TERF2Q15554 542 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 MRFAP1L1Q96HT8 127 aa12.73□□□□□ -0.37
NEIL1-202ENST00000561643 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
NEIL1-202ENST00000561643 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
NEIL1-202ENST00000561643 SPTLC2O15270 562 aa12.72□□□□□ -0.37
NEIL1-202ENST00000561643 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
NEIL1-202ENST00000561643 AOPEPQ8N6M6 819 aa12.72□□□□□ -0.37
NEIL1-202ENST00000561643 CDHR2Q9BYE9 1310 aa12.72□□□□□ -0.37
NEIL1-202ENST00000561643 YEATS4O95619 227 aa12.72□□□□□ -0.37
NEIL1-202ENST00000561643 TTF1Q15361 905 aaPredicted RBP12.72□□□□□ -0.37
NEIL1-202ENST00000561643 DHX40Q8IX18 779 aaKnown RBP12.72□□□□□ -0.37
NEIL1-202ENST00000561643 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
NEIL1-202ENST00000561643 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
NEIL1-202ENST00000561643 CNPY4Q8N129 248 aa12.72□□□□□ -0.37
NEIL1-202ENST00000561643 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.37
NEIL1-202ENST00000561643 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.37
NEIL1-202ENST00000561643 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.37
NEIL1-202ENST00000561643 DENND2AQ9ULE3 1009 aa12.71□□□□□ -0.37
NEIL1-202ENST00000561643 ANGEL1Q9UNK9 670 aaKnown RBP12.71□□□□□ -0.37
NEIL1-202ENST00000561643 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
NEIL1-202ENST00000561643 TNNT1P13805 278 aa12.71□□□□□ -0.38
NEIL1-202ENST00000561643 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.38
NEIL1-202ENST00000561643 TBC1D10CQ8IV04 446 aa12.71□□□□□ -0.38
NEIL1-202ENST00000561643 WDR19Q8NEZ3 1342 aa12.71□□□□□ -0.38
NEIL1-202ENST00000561643 ZNF532Q9HCE3 1301 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
NEIL1-202ENST00000561643 CAPN2P17655 700 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms