RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 DNAJC25Q9H1X3 360 aa6.11□□□□□ -1.43
HERC1-215ENST00000561436 ZNF576Q9H609 170 aa6.11□□□□□ -1.43
HERC1-215ENST00000561436 SRA1Q9HD15 236 aaKnown RBP6.11□□□□□ -1.43
HERC1-215ENST00000561436 LOC100289279A0A1B0GTE1 492 aa6.1□□□□□ -1.43
HERC1-215ENST00000561436 FMR1Q06787 632 aaKnown RBP eCLIP6.1□□□□□ -1.43
HERC1-215ENST00000561436 BCO2Q9BYV7 579 aa6.1□□□□□ -1.43
HERC1-215ENST00000561436 CLEC4MQ9H2X3 399 aaPredicted RBP6.1□□□□□ -1.43
HERC1-215ENST00000561436 TMEM238LA0A1B0GVL6 79 aa6.09□□□□□ -1.43
HERC1-215ENST00000561436 PREPP48147 710 aa6.09□□□□□ -1.43
HERC1-215ENST00000561436 DZIP1LQ8IYY4 767 aaKnown RBP6.09□□□□□ -1.43
HERC1-215ENST00000561436 TMEM130Q8N3G9 435 aa6.09□□□□□ -1.43
HERC1-215ENST00000561436 TRIM56Q9BRZ2 755 aaKnown RBP6.09□□□□□ -1.43
HERC1-215ENST00000561436 RUSC1Q9BVN2 902 aa6.09□□□□□ -1.43
HERC1-215ENST00000561436 ZC3H12CQ9C0D7 883 aaKnown RBP6.09□□□□□ -1.43
HERC1-215ENST00000561436 OSGEPQ9NPF4 335 aa6.09□□□□□ -1.43
HERC1-215ENST00000561436 NLRP2Q9NX02 1062 aa6.09□□□□□ -1.43
HERC1-215ENST00000561436 SCRIBQ14160 1630 aa6.09□□□□□ -1.43
HERC1-215ENST00000561436 FBXO24O75426 580 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 DRD2P14416 443 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 ZNF16P17020 682 aaPredicted RBP6.08□□□□□ -1.44
HERC1-215ENST00000561436 MAOBP27338 520 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 ARL4DP49703 201 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 PRSS36Q5K4E3 855 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 Q6ZS46 218 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 ARMC10Q8N2F6 343 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 WNT8BQ93098 351 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 OSBPL7Q9BZF2 842 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 NRSN2Q9GZP1 204 aa6.08□□□□□ -1.44
HERC1-215ENST00000561436 LDHBP07195 334 aaKnown RBP6.07□□□□□ -1.44
HERC1-215ENST00000561436 ITPKAP23677 461 aa6.07□□□□□ -1.44
HERC1-215ENST00000561436 PRPF40BQ6NWY9 871 aaKnown RBP6.07□□□□□ -1.44
HERC1-215ENST00000561436 DTHD1Q6ZMT9 781 aa6.07□□□□□ -1.44
HERC1-215ENST00000561436 AKAP2Q9Y2D5 859 aa6.07□□□□□ -1.44
HERC1-215ENST00000561436 NCAPD3P42695 1498 aa6.07□□□□□ -1.44
HERC1-215ENST00000561436 PRPF40AO75400 957 aaKnown RBP6.06□□□□□ -1.44
HERC1-215ENST00000561436 B3GALT4O96024 378 aa6.06□□□□□ -1.44
HERC1-215ENST00000561436 XPCQ01831 940 aaPredicted RBP6.06□□□□□ -1.44
HERC1-215ENST00000561436 TAGLNQ01995 201 aaKnown RBP6.06□□□□□ -1.44
HERC1-215ENST00000561436 ALG1LQ6GMV1 187 aa6.06□□□□□ -1.44
HERC1-215ENST00000561436 FBXO33Q7Z6M2 555 aa6.06□□□□□ -1.44
HERC1-215ENST00000561436 STK35Q8TDR2 534 aa6.06□□□□□ -1.44
HERC1-215ENST00000561436 UTP4Q969X6 686 aaKnown RBP6.06□□□□□ -1.44
HERC1-215ENST00000561436 GPN3Q9UHW5 284 aaPredicted RBP6.06□□□□□ -1.44
HERC1-215ENST00000561436 FDX2Q6P4F2 183 aa6.05□□□□□ -1.44
HERC1-215ENST00000561436 PRR23CQ6ZRP0 262 aa6.05□□□□□ -1.44
HERC1-215ENST00000561436 C12orf50Q8NA57 414 aaPredicted RBP6.05□□□□□ -1.44
HERC1-215ENST00000561436 FBF1Q8TES7 1133 aa6.05□□□□□ -1.44
HERC1-215ENST00000561436 ZNF428Q96B54 188 aa6.05□□□□□ -1.44
HERC1-215ENST00000561436 MRRFQ96E11 262 aaKnown RBP6.05□□□□□ -1.44
HERC1-215ENST00000561436 RNF208Q9H0X6 261 aa6.05□□□□□ -1.44
HERC1-215ENST00000561436 MRS2Q9HD23 443 aa6.05□□□□□ -1.44
HERC1-215ENST00000561436 HMX2A2RU54 273 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 SART1O43290 800 aaKnown RBP6.04□□□□□ -1.44
HERC1-215ENST00000561436 POU4F3Q15319 338 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 SGO2Q562F6 1265 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 AKAP4Q5JQC9 854 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 NUTM2GQ5VZR2 741 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 MPRIPQ6WCQ1 1025 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 TPTE2Q6XPS3 522 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 C3orf58Q8NDZ4 430 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 DCAF11Q8TEB1 546 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 WDR89Q96FK6 387 aaPredicted RBP6.04□□□□□ -1.44
HERC1-215ENST00000561436 FAM46AQ96IP4 442 aaKnown RBP6.04□□□□□ -1.44
HERC1-215ENST00000561436 FAM161BQ96MY7 647 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 TMPRSS13Q9BYE2 586 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 SOX17Q9H6I2 414 aaPredicted RBP6.04□□□□□ -1.44
HERC1-215ENST00000561436 TRAK1Q9UPV9 953 aa6.04□□□□□ -1.44
HERC1-215ENST00000561436 H2AFB1P0C5Y9 115 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 BMP3P12645 472 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 LIG1P18858 919 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 PDE3AQ14432 1141 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 TRIM42Q8IWZ5 723 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 FRMD6Q96NE9 622 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 CEP41Q9BYV8 373 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 KCNF1Q9H3M0 494 aa6.03□□□□□ -1.44
HERC1-215ENST00000561436 GAS2O43903 313 aaKnown RBP6.02□□□□□ -1.45
HERC1-215ENST00000561436 PAGE1O75459 146 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 PSMD2Q13200 908 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 SHISA5Q8N114 240 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 MYRFLQ96LU7 910 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
HERC1-215ENST00000561436 CORO1BQ9BR76 489 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 CCDC86Q9H6F5 360 aaKnown RBP6.02□□□□□ -1.45
HERC1-215ENST00000561436 C7orf69Q9H7B7 122 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 SPG7Q9UQ90 795 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 RAXQ9Y2V3 346 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 UNC13AQ9UPW8 1703 aa6.02□□□□□ -1.45
HERC1-215ENST00000561436 TIAF1O95411 115 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 USP17L7P0C7H9 530 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 FSTP19883 344 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 VAMP1P23763 118 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 ZMYM1Q5SVZ6 1142 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 RASIP1Q5U651 963 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 ANKRD34AQ69YU3 496 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 CDPF1Q6NVV7 123 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 FAM20CQ8IXL6 584 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 C2CD4AQ8NCU7 369 aaPredicted RBP6.01□□□□□ -1.45
HERC1-215ENST00000561436 FBLIM1Q8WUP2 373 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 LGR6Q9HBX8 967 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms