RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	CYP46A1	Q9Y6A2	500 aa		8.86	□□□□□ -0.99
ZEB1-222	ENST00000561212	COL1A1	P02452	1464 aa	Predicted RBP	8.86	□□□□□ -0.99
ZEB1-222	ENST00000561212	FOXP2	O15409	715 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	UQCRFS1P1	P0C7P4	283 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	SRGN	P10124	158 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	SLC5A1	P13866	664 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	KCNJ4	P48050	445 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	BCAM	P50895	628 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	ST5	P78524	1137 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	KLHL40	Q2TBA0	621 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	SLFNL1	Q499Z3	407 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	MCMDC2	Q4G0Z9	681 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	TTC39A	Q5SRH9	613 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	ZSCAN31	Q96LW9	406 aa	Predicted RBP	8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	SEC62	Q99442	399 aa	Known RBP	8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	DNAJC2	Q99543	621 aa	Known RBP	8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	SH2B1	Q9NRF2	756 aa	Predicted RBP	8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	PDRG1	Q9NUG6	133 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	TCRBV5S4A2T	A0A5A2	114 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	BBOX1	O75936	387 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	KLRK1	P26718	216 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	KRT32	Q14532	448 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	ADCK5	Q3MIX3	580 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	TXNRD3	Q86VQ6	643 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	ANKRD2	Q9GZV1	360 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	PIH1D3	Q9NQM4	214 aa	Known RBP	8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	HELLS	Q9NRZ9	838 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	PODXL2	Q9NZ53	605 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	PCDHB8	Q9UN66	801 aa		8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	8.85	□□□□□ -0.99
ZEB1-222	ENST00000561212	SNED1	Q8TER0	1413 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	PDS5A	Q29RF7	1337 aa	Known RBP	8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	DUOX1	Q9NRD9	1551 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	RNF113A	O15541	343 aa	Known RBP	8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	IRX5	P78411	483 aa	Predicted RBP	8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	FKBP4	Q02790	459 aa	Known RBP eCLIP	8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	ANKRD1	Q15327	319 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	LRRFIP1	Q32MZ4	808 aa	Known RBP	8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	GORAB	Q5T7V8	394 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	NOL8	Q76FK4	1167 aa	Known RBP	8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	SPATA5	Q8NB90	893 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	SLAIN1	Q8ND83	568 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	OSBP2	Q969R2	916 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	STK32B	Q9NY57	414 aa		8.84	□□□□□ -0.99
ZEB1-222	ENST00000561212	CACNA1S	Q13698	1873 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	WDR33	Q9C0J8	1336 aa	Known RBP	8.83	□□□□□ -1
ZEB1-222	ENST00000561212	KIF13B	Q9NQT8	1826 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	GOLGA6L3	A6NEY3	463 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	ADD2	P35612	726 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	GYG1	P46976	350 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	MSL1	Q68DK7	614 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	MCTP1	Q6DN14	999 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	BLOC1S2	Q6QNY1	142 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	SLC16A10	Q8TF71	515 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	SPOCK2	Q92563	424 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	DSCC1	Q9BVC3	393 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	GZF1	Q9H116	711 aa	Predicted RBP	8.83	□□□□□ -1
ZEB1-222	ENST00000561212	LMBRD1	Q9NUN5	540 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	LEMD3	Q9Y2U8	911 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	MAST3	O60307	1309 aa		8.83	□□□□□ -1
ZEB1-222	ENST00000561212	ZFY	P08048	801 aa	Predicted RBP	8.82	□□□□□ -1
ZEB1-222	ENST00000561212	PDIA4	P13667	645 aa	Known RBP	8.82	□□□□□ -1
ZEB1-222	ENST00000561212	NPR1	P16066	1061 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	RPS6KB1	P23443	525 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	COL9A3	Q14050	684 aa	Predicted RBP	8.82	□□□□□ -1
ZEB1-222	ENST00000561212	TTF1	Q15361	905 aa	Predicted RBP	8.82	□□□□□ -1
ZEB1-222	ENST00000561212	UBE3C	Q15386	1083 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	TMC4	Q7Z404	712 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	SP8	Q8IXZ3	490 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	ZNF384	Q8TF68	577 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	C7orf43	Q8WVR3	580 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	RPGR	Q92834	1020 aa	Known RBP	8.82	□□□□□ -1
ZEB1-222	ENST00000561212	RBM17	Q96I25	401 aa	Known RBP	8.82	□□□□□ -1
ZEB1-222	ENST00000561212	OCEL1	Q9H607	264 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	PARP3	Q9Y6F1	533 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	TAF6L	Q9Y6J9	622 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	XDH	P47989	1333 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	DLEC1	Q9Y238	1755 aa		8.82	□□□□□ -1
ZEB1-222	ENST00000561212	SLX4	Q8IY92	1834 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212		M0R2C6	588 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	SEMA3E	O15041	775 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	CPA1	P15085	419 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	PDE6B	P35913	854 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	GPSM2	P81274	684 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	SF3B2	Q13435	895 aa	Known RBP	8.81	□□□□□ -1
ZEB1-222	ENST00000561212	CCDC129	Q6ZRS4	1044 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	C10orf71	Q711Q0	1435 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	TDRD7	Q8NHU6	1098 aa	Known RBP	8.81	□□□□□ -1
ZEB1-222	ENST00000561212	APPBP2	Q92624	585 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	PUS7L	Q9H0K6	701 aa	Known RBP	8.81	□□□□□ -1
ZEB1-222	ENST00000561212	KIAA1551	Q9HCM1	1747 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	POLL	Q9UGP5	575 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	WWC3	Q9ULE0	1092 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	SMC3	Q9UQE7	1217 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	ATP6V0A2	Q9Y487	856 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	DDX49	Q9Y6V7	483 aa	Known RBP	8.81	□□□□□ -1
ZEB1-222	ENST00000561212	CHD4	Q14839	1912 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	MYH13	Q9UKX3	1938 aa		8.81	□□□□□ -1
ZEB1-222	ENST00000561212	NPHP1	O15259	732 aa		8.8	□□□□□ -1
ZEB1-222	ENST00000561212	LARGE1	O95461	756 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms