RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 NXPE3Q969Y0 559 aa5.4□□□□□ -1.54
CTDSPL2-211ENST00000561189 SPATA32Q96LK8 384 aa5.4□□□□□ -1.54
CTDSPL2-211ENST00000561189 POP1Q99575 1024 aaKnown RBP5.4□□□□□ -1.54
CTDSPL2-211ENST00000561189 SOX17Q9H6I2 414 aaPredicted RBP5.4□□□□□ -1.54
CTDSPL2-211ENST00000561189 SOX13Q9UN79 622 aa5.4□□□□□ -1.54
CTDSPL2-211ENST00000561189 PPME1Q9Y570 386 aa5.4□□□□□ -1.54
CTDSPL2-211ENST00000561189 C1QTNF9BB2RNN3 333 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 H3BRJ5 948 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 MSTNO14793 375 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 APBA3O96018 575 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 SELPP16109 830 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 CDC27P30260 824 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 PIP4K2BP78356 416 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 SETDB1Q15047 1291 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 LRRC14Q15048 493 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 GDF6Q6KF10 455 aaPredicted RBP5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 DMRTC2Q8IXT2 367 aaPredicted RBP5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 TMEM130Q8N3G9 435 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 IL22RA1Q8N6P7 574 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 KLHL23Q8NBE8 558 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 TCF12Q99081 682 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 SPOCK3Q9BQ16 436 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 EMILIN2Q9BXX0 1053 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 TANGO6Q9C0B7 1094 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 LACRTQ9GZZ8 138 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 CLEC4MQ9H2X3 399 aaPredicted RBP5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 OSGEPQ9NPF4 335 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 TMEM39AQ9NV64 488 aa5.39□□□□□ -1.55
CTDSPL2-211ENST00000561189 TRPA1O75762 1119 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 ACPPP15309 386 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 ITPKAP23677 461 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 CHRNA4P43681 627 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 IKBKEQ14164 716 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 MAP3K11Q16584 847 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 ZNF394Q53GI3 561 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 SNAP47Q5SQN1 464 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 HP1BP3Q5SSJ5 553 aaPredicted RBP5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 Q6ZS46 218 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 METTL16Q86W50 562 aaKnown RBP5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 KIAA0825Q8IV33 1275 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 GLIS3Q8NEA6 775 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 ANKRD24Q8TF21 1146 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 SPON2Q9BUD6 331 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 RSRP1Q9BUV0 290 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 ZNF576Q9H609 170 aa5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 DDX41Q9UJV9 622 aaKnown RBP5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.38□□□□□ -1.55
CTDSPL2-211ENST00000561189 METTL12A8MUP2 240 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 MINDY4BA8MYZ0 360 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 FBXO24O75426 580 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 ATP2B1P20020 1258 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 DNAJA1P31689 397 aaKnown RBP5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 GRIA4P48058 902 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 ARID5AQ03989 594 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 PCDH1Q08174 1060 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 MBTPS1Q14703 1052 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 SUZ12Q15022 739 aaKnown RBP5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 SPRED3Q2MJR0 410 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 TTBK2Q6IQ55 1244 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 C3orf58Q8NDZ4 430 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 ACBD3Q9H3P7 528 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 CBX8Q9HC52 389 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 KBTBD4Q9NVX7 518 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 PCDHGB7Q9Y5F8 929 aa5.37□□□□□ -1.55
CTDSPL2-211ENST00000561189 BPNT1O95861 308 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 EPHA1P21709 976 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 LIG3P49916 1009 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 ADAMTSL4Q6UY14 1074 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 VN1R5Q7Z5H4 357 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 TXNRD3Q86VQ6 643 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 UBXN4Q92575 508 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 GPRASP2Q96D09 838 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 TMEM74Q96NL1 305 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 MRPL18Q9H0U6 180 aaKnown RBP5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 MIR1-1HGQ9H1L0 117 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 SEC31BQ9NQW1 1179 aa5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 SUPT16HQ9Y5B9 1047 aaKnown RBP5.36□□□□□ -1.55
CTDSPL2-211ENST00000561189 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 SSBP05455 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 EIF4A3P38919 411 aaKnown RBP5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 ZNF157P51786 506 aaPredicted RBP5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 RPS26P62854 115 aaKnown RBP5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 RAD51AP2Q09MP3 1159 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 AP3B2Q13367 1082 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 GRIK4Q16099 956 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 LDLRAD1Q5T700 205 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 ERMP1Q7Z2K6 904 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 SLC43A3Q8NBI5 491 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 SLC7A3Q8WY07 619 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 NECAB3Q96P71 396 aaPredicted RBP5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 HHIPQ96QV1 700 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 SSBP4Q9BWG4 385 aaPredicted RBP5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 CYP8B1Q9UNU6 501 aa5.35□□□□□ -1.55
CTDSPL2-211ENST00000561189 FSCN2O14926 492 aa5.34□□□□□ -1.55
CTDSPL2-211ENST00000561189 CYP11A1P05108 521 aa5.34□□□□□ -1.55
CTDSPL2-211ENST00000561189 CELA3AP09093 270 aa5.34□□□□□ -1.55
CTDSPL2-211ENST00000561189 NME2P22392 152 aa5.34□□□□□ -1.55
CTDSPL2-211ENST00000561189 CDC25BP30305 580 aa5.34□□□□□ -1.55
CTDSPL2-211ENST00000561189 GATA4P43694 442 aa5.34□□□□□ -1.55
CTDSPL2-211ENST00000561189 GSTM4Q03013 218 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms