RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	CACNB3	P54284	484 aa		33.89	■■■■□ 3.02
SNRPA1-215	ENST00000561187	TMEM39B	Q9GZU3	492 aa		33.89	■■■■□ 3.02
SNRPA1-215	ENST00000561187	GJA5	P36382	358 aa		33.88	■■■■□ 3.01
SNRPA1-215	ENST00000561187	PUM3	Q15397	648 aa	Known RBP	33.88	■■■■□ 3.01
SNRPA1-215	ENST00000561187	HPS5	Q9UPZ3	1129 aa		33.88	■■■■□ 3.01
SNRPA1-215	ENST00000561187	MANSC4	A6NHS7	340 aa	Predicted RBP	33.87	■■■■□ 3.01
SNRPA1-215	ENST00000561187	RFX5	P48382	616 aa	Predicted RBP	33.87	■■■■□ 3.01
SNRPA1-215	ENST00000561187	SIL1	Q9H173	461 aa		33.87	■■■■□ 3.01
SNRPA1-215	ENST00000561187	ELP3	Q9H9T3	547 aa		33.87	■■■■□ 3.01
SNRPA1-215	ENST00000561187	IGF2BP3	O00425	579 aa	Known RBP eCLIP	33.86	■■■■□ 3.01
SNRPA1-215	ENST00000561187	IFIT1	P09914	478 aa	Known RBP	33.86	■■■■□ 3.01
SNRPA1-215	ENST00000561187	ZBTB48	P10074	688 aa	Predicted RBP	33.86	■■■■□ 3.01
SNRPA1-215	ENST00000561187	IFNL1	Q8IU54	200 aa		33.86	■■■■□ 3.01
SNRPA1-215	ENST00000561187	NOB1	Q9ULX3	412 aa	Known RBP	33.86	■■■■□ 3.01
SNRPA1-215	ENST00000561187	EYA2	O00167	538 aa		33.85	■■■■□ 3.01
SNRPA1-215	ENST00000561187	TBC1D22A	Q8WUA7	517 aa		33.85	■■■■□ 3.01
SNRPA1-215	ENST00000561187	FKTN	O75072	461 aa		33.84	■■■■□ 3.01
SNRPA1-215	ENST00000561187	UBTFL1	P0CB47	393 aa	Predicted RBP	33.84	■■■■□ 3.01
SNRPA1-215	ENST00000561187	ANKRD13A	Q8IZ07	590 aa		33.84	■■■■□ 3.01
SNRPA1-215	ENST00000561187	TEPSIN	Q96N21	525 aa		33.84	■■■■□ 3.01
SNRPA1-215	ENST00000561187	MYH13	Q9UKX3	1938 aa		33.83	■■■■□ 3.01
SNRPA1-215	ENST00000561187	FGFR2	P21802	821 aa		33.83	■■■■□ 3.01
SNRPA1-215	ENST00000561187	TEKT1	Q969V4	418 aa		33.83	■■■■□ 3.01
SNRPA1-215	ENST00000561187	SLC5A1	P13866	664 aa		33.82	■■■■□ 3
SNRPA1-215	ENST00000561187	TRMT2A	Q8IZ69	625 aa	Known RBP	33.82	■■■■□ 3
SNRPA1-215	ENST00000561187	CNKSR2	Q8WXI2	1034 aa		33.82	■■■■□ 3
SNRPA1-215	ENST00000561187	TNNI2	P48788	182 aa		33.81	■■■■□ 3
SNRPA1-215	ENST00000561187	OPTN	Q96CV9	577 aa		33.81	■■■■□ 3
SNRPA1-215	ENST00000561187	ALDH1A1	P00352	501 aa		33.8	■■■■□ 3
SNRPA1-215	ENST00000561187	ATG9A	Q7Z3C6	839 aa		33.8	■■■■□ 3
SNRPA1-215	ENST00000561187	LRRFIP2	Q9Y608	721 aa	Known RBP	33.8	■■■■□ 3
SNRPA1-215	ENST00000561187	CFHR5	Q9BXR6	569 aa		33.79	■■■■□ 3
SNRPA1-215	ENST00000561187	TNRC18	O15417	2968 aa	Predicted RBP	33.79	■■■■□ 3
SNRPA1-215	ENST00000561187	LAMB1	P07942	1786 aa		33.78	■■■■□ 3
SNRPA1-215	ENST00000561187	PKN2	Q16513	984 aa	Known RBP	33.78	■■■■□ 3
SNRPA1-215	ENST00000561187	LPIN2	Q92539	896 aa		33.78	■■■■□ 3
SNRPA1-215	ENST00000561187	PA2G4	Q9UQ80	394 aa	Known RBP	33.78	■■■■□ 3
SNRPA1-215	ENST00000561187	INHBE	P58166	350 aa		33.77	■■■■□ 3
SNRPA1-215	ENST00000561187	VGLL4	Q14135	290 aa		33.77	■■■■□ 3
SNRPA1-215	ENST00000561187	NOM1	Q5C9Z4	860 aa	Known RBP	33.77	■■■■□ 3
SNRPA1-215	ENST00000561187	TMOD2	Q9NZR1	351 aa		33.77	■■■■□ 3
SNRPA1-215	ENST00000561187	HDLBP	Q00341	1268 aa	Known RBP	33.76	■■■□□ 2.99
SNRPA1-215	ENST00000561187	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	33.76	■■■□□ 2.99
SNRPA1-215	ENST00000561187	API5	Q9BZZ5	524 aa	Known RBP	33.76	■■■□□ 2.99
SNRPA1-215	ENST00000561187	KIF16B	Q96L93	1317 aa		33.76	■■■□□ 2.99
SNRPA1-215	ENST00000561187	UNCX	A6NJT0	531 aa		33.75	■■■□□ 2.99
SNRPA1-215	ENST00000561187	CRHR2	Q13324	411 aa		33.75	■■■□□ 2.99
SNRPA1-215	ENST00000561187	ATP2B3	Q16720	1220 aa		33.75	■■■□□ 2.99
SNRPA1-215	ENST00000561187	ZDHHC15	Q96MV8	337 aa		33.75	■■■□□ 2.99
SNRPA1-215	ENST00000561187	MEIS3	Q99687	375 aa		33.75	■■■□□ 2.99
SNRPA1-215	ENST00000561187	PTPN18	Q99952	460 aa		33.75	■■■□□ 2.99
SNRPA1-215	ENST00000561187	APOBEC3H	Q6NTF7	200 aa	Known RBP	33.74	■■■□□ 2.99
SNRPA1-215	ENST00000561187	FBXO46	Q6PJ61	603 aa	Predicted RBP	33.74	■■■□□ 2.99
SNRPA1-215	ENST00000561187	TRIM17	Q9Y577	477 aa		33.74	■■■□□ 2.99
SNRPA1-215	ENST00000561187	MAST3	O60307	1309 aa		33.74	■■■□□ 2.99
SNRPA1-215	ENST00000561187	CT47B1	P0C2W7	299 aa	Predicted RBP	33.73	■■■□□ 2.99
SNRPA1-215	ENST00000561187	OTUD5	Q96G74	571 aa		33.73	■■■□□ 2.99
SNRPA1-215	ENST00000561187	CSAD	Q9Y600	493 aa		33.73	■■■□□ 2.99
SNRPA1-215	ENST00000561187	PDE4DIP	Q5VU43	2346 aa		33.72	■■■□□ 2.99
SNRPA1-215	ENST00000561187	MAP3K9	P80192	1104 aa		33.72	■■■□□ 2.99
SNRPA1-215	ENST00000561187	DIXDC1	Q155Q3	683 aa		33.72	■■■□□ 2.99
SNRPA1-215	ENST00000561187	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	33.72	■■■□□ 2.99
SNRPA1-215	ENST00000561187	CEP126	Q9P2H0	1117 aa		33.72	■■■□□ 2.99
SNRPA1-215	ENST00000561187	HTT	P42858	3142 aa		33.72	■■■□□ 2.99
SNRPA1-215	ENST00000561187	RARS	P54136	660 aa	Known RBP	33.71	■■■□□ 2.99
SNRPA1-215	ENST00000561187	OTUD7B	Q6GQQ9	843 aa		33.71	■■■□□ 2.99
SNRPA1-215	ENST00000561187	WDR66	Q8TBY9	1149 aa		33.71	■■■□□ 2.99
SNRPA1-215	ENST00000561187	CCER2	I3L3R5	266 aa		33.7	■■■□□ 2.99
SNRPA1-215	ENST00000561187	PRDX5	P30044	214 aa		33.7	■■■□□ 2.99
SNRPA1-215	ENST00000561187	CD99L2	Q8TCZ2	262 aa		33.7	■■■□□ 2.99
SNRPA1-215	ENST00000561187	WRNIP1	Q96S55	665 aa		33.7	■■■□□ 2.99
SNRPA1-215	ENST00000561187	CIAO1	O76071	339 aa		33.69	■■■□□ 2.98
SNRPA1-215	ENST00000561187	BRI3BP	Q8WY22	251 aa		33.69	■■■□□ 2.98
SNRPA1-215	ENST00000561187	SUGT1	Q9Y2Z0	365 aa		33.69	■■■□□ 2.98
SNRPA1-215	ENST00000561187	CCL15-CCL14	A0A0B4J2E2	113 aa		33.68	■■■□□ 2.98
SNRPA1-215	ENST00000561187	ADORA1	P30542	326 aa		33.68	■■■□□ 2.98
SNRPA1-215	ENST00000561187	PHKA1	P46020	1223 aa		33.68	■■■□□ 2.98
SNRPA1-215	ENST00000561187	CCL15	Q16663	113 aa		33.68	■■■□□ 2.98
SNRPA1-215	ENST00000561187	OTOP1	Q7RTM1	612 aa		33.68	■■■□□ 2.98
SNRPA1-215	ENST00000561187	MS4A4A	Q96JQ5	239 aa		33.68	■■■□□ 2.98
SNRPA1-215	ENST00000561187	DAGLA	Q9Y4D2	1042 aa		33.68	■■■□□ 2.98
SNRPA1-215	ENST00000561187	HHIPL2	Q6UWX4	724 aa		33.67	■■■□□ 2.98
SNRPA1-215	ENST00000561187	ZKSCAN4	Q969J2	545 aa	Predicted RBP	33.67	■■■□□ 2.98
SNRPA1-215	ENST00000561187	TCP10	Q12799	353 aa		33.66	■■■□□ 2.98
SNRPA1-215	ENST00000561187	MIGA2	Q7L4E1	593 aa		33.66	■■■□□ 2.98
SNRPA1-215	ENST00000561187	TNN	Q9UQP3	1299 aa		33.66	■■■□□ 2.98
SNRPA1-215	ENST00000561187	SNCAIP	Q9Y6H5	919 aa		33.66	■■■□□ 2.98
SNRPA1-215	ENST00000561187	TESPA1	A2RU30	521 aa	Predicted RBP	33.65	■■■□□ 2.98
SNRPA1-215	ENST00000561187	IL15	P40933	162 aa	Predicted RBP	33.65	■■■□□ 2.98
SNRPA1-215	ENST00000561187	FAM83A	Q86UY5	434 aa		33.65	■■■□□ 2.98
SNRPA1-215	ENST00000561187	GNL3L	Q9NVN8	582 aa	Known RBP	33.65	■■■□□ 2.98
SNRPA1-215	ENST00000561187	MRI	Q9BWK5	157 aa		33.64	■■■□□ 2.98
SNRPA1-215	ENST00000561187	FBXO3	Q9UK99	471 aa		33.64	■■■□□ 2.98
SNRPA1-215	ENST00000561187	CENPF	P49454	3210 aa		33.64	■■■□□ 2.98
SNRPA1-215	ENST00000561187	LDHB	P07195	334 aa	Known RBP	33.63	■■■□□ 2.97
SNRPA1-215	ENST00000561187	GTF2A2	P52657	109 aa		33.63	■■■□□ 2.97
SNRPA1-215	ENST00000561187	CAP1	Q01518	475 aa		33.63	■■■□□ 2.97
SNRPA1-215	ENST00000561187	TAF1C	Q15572	869 aa	Predicted RBP	33.63	■■■□□ 2.97
SNRPA1-215	ENST00000561187	FAM43A	Q8N2R8	423 aa		33.63	■■■□□ 2.97
SNRPA1-215	ENST00000561187	ERO1A	Q96HE7	468 aa		33.63	■■■□□ 2.97

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