RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	TNIP1	Q15025	636 aa		13.7	□□□□□ -0.22
CERS3-208	ENST00000560944	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.7	□□□□□ -0.22
CERS3-208	ENST00000560944	RBM26	Q5T8P6	1007 aa	Known RBP	13.7	□□□□□ -0.22
CERS3-208	ENST00000560944	GPC2	Q8N158	579 aa		13.7	□□□□□ -0.22
CERS3-208	ENST00000560944	RILPL2	Q969X0	211 aa		13.7	□□□□□ -0.22
CERS3-208	ENST00000560944	TRIM6-TRIM34	B2RNG4	842 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	LDHB	P07195	334 aa	Known RBP	13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	POTEI	P0CG38	1075 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	POTEJ	P0CG39	1038 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	PDE6A	P16499	860 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	SDS	P20132	328 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	DZIP1	Q86YF9	867 aa	Known RBP	13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	MAGEB6	Q8N7X4	407 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	NSUN4	Q96CB9	384 aa	Known RBP	13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	GPRC5D	Q9NZD1	345 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	LRP2BP	Q9P2M1	347 aa		13.69	□□□□□ -0.22
CERS3-208	ENST00000560944	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	TCRBV5S4A2T	A0A5A2	114 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	CRK	P46108	304 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	HIRA	P54198	1017 aa	Predicted RBP	13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	DYNLL1	P63167	89 aa	Known RBP	13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	ERICH6	Q7L0X2	663 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	KBTBD3	Q8NAB2	608 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	MIGA1	Q8NAN2	632 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	TBC1D22A	Q8WUA7	517 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	FSD1	Q9BTV5	496 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	IL25	Q9H293	177 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	RRAGC	Q9HB90	399 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	CNOT7	Q9UIV1	285 aa	Known RBP	13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	DAGLA	Q9Y4D2	1042 aa		13.68	□□□□□ -0.22
CERS3-208	ENST00000560944	ZNF532	Q9HCE3	1301 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944		M0R2C6	588 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	ZBTB22	O15209	634 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	USP17L8	P0C7I0	530 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	CYP7A1	P22680	504 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	CACNB3	P54284	484 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	ZNF280A	P59817	542 aa	Predicted RBP	13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	FKBP1A	P62942	108 aa	Known RBP	13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	NBPF9	Q3BBW0	867 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	CFAP100	Q494V2	611 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	DLK2	Q6UY11	383 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	CCDC129	Q6ZRS4	1044 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	AGBL3	Q8NEM8	1001 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	FAM227B	Q96M60	508 aa		13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	SEC62	Q99442	399 aa	Known RBP	13.67	□□□□□ -0.22
CERS3-208	ENST00000560944	CDK5RAP2	Q96SN8	1893 aa		13.66	□□□□□ -0.22
CERS3-208	ENST00000560944		A0A0D9SFI3	127 aa		13.66	□□□□□ -0.22
CERS3-208	ENST00000560944	CLRN2	A0PK11	232 aa		13.66	□□□□□ -0.22
CERS3-208	ENST00000560944	ADD2	P35612	726 aa		13.66	□□□□□ -0.22
CERS3-208	ENST00000560944	SLC9C2	Q5TAH2	1124 aa		13.66	□□□□□ -0.22
CERS3-208	ENST00000560944	MYOZ2	Q9NPC6	264 aa		13.66	□□□□□ -0.22
CERS3-208	ENST00000560944	MROH7-TTC4	A0A0A0MT08	1334 aa		13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	MYO3B	Q8WXR4	1341 aa		13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	RPS12	P25398	132 aa	Known RBP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	YY1	P25490	414 aa		13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	EPHX2	P34913	555 aa		13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	BTD	P43251	543 aa		13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	RBM5	P52756	815 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	NMI	Q13287	307 aa	Predicted RBP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	KIF4B	Q2VIQ3	1234 aa		13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	NAA16	Q6N069	864 aa	Predicted RBP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	DPF2	Q92785	391 aa		13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	ZBED3	Q96IU2	234 aa	Predicted RBP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	PRMT6	Q96LA8	375 aa	Predicted RBP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.65	□□□□□ -0.22
CERS3-208	ENST00000560944	GAK	O14976	1311 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	SCN4A	P35499	1836 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	ECM29	Q5VYK3	1845 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	LMOD1	P29536	600 aa	Predicted RBP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	TTF1	Q15361	905 aa	Predicted RBP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	EAPP	Q56P03	285 aa	Predicted RBP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	DPY19L2	Q6NUT2	758 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	CDAN1	Q8IWY9	1227 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	CNTROB	Q8N137	903 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	LCORL	Q8N3X6	602 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	ZGPAT	Q8N5A5	531 aa	Known RBP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	OSBP2	Q969R2	916 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	EVI5L	Q96CN4	794 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	PUS7L	Q9H0K6	701 aa	Known RBP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	ARMT1	Q9H993	441 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	HACL1	Q9UJ83	578 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	MAST3	O60307	1309 aa		13.64	□□□□□ -0.23
CERS3-208	ENST00000560944	SPDYE2B	A6NHP3	402 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	WNT10B	O00744	389 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	RNF113A	O15541	343 aa	Known RBP	13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	MBD4	O95243	580 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	SPDYE6	P0CI01	402 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	EVX2	Q03828	476 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	MAP3K12	Q12852	859 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	BMP2KL	Q5H9B9	411 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	TEKT1	Q969V4	418 aa		13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	TDRD3	Q9H7E2	651 aa	Known RBP	13.63	□□□□□ -0.23
CERS3-208	ENST00000560944	RFX7	Q2KHR2	1363 aa		13.62	□□□□□ -0.23
CERS3-208	ENST00000560944	PRKAB2	O43741	272 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms