RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 HAND2P61296 217 aa15.29■□□□□ 0.04
SNX1-211ENST00000560829 SLC15A2Q16348 729 aa15.29■□□□□ 0.04
SNX1-211ENST00000560829 MB21D2Q8IYB1 491 aaPredicted RBP15.29■□□□□ 0.04
SNX1-211ENST00000560829 LCORLQ8N3X6 602 aa15.29■□□□□ 0.04
SNX1-211ENST00000560829 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
SNX1-211ENST00000560829 NCOA7Q8NI08 942 aa15.29■□□□□ 0.04
SNX1-211ENST00000560829 NBPF3Q9H094 633 aa15.29■□□□□ 0.04
SNX1-211ENST00000560829 APPP05067 770 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 SRGNP10124 158 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 PDIA4P13667 645 aaKnown RBP15.28■□□□□ 0.04
SNX1-211ENST00000560829 EVCP57679 992 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 ADGRA1Q86SQ6 560 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 NECAB1Q8N987 351 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 ZNF384Q8TF68 577 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 BRF1Q92994 677 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 GTF3C6Q969F1 213 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 NSUN4Q96CB9 384 aaKnown RBP15.28■□□□□ 0.04
SNX1-211ENST00000560829 RIOK1Q9BRS2 568 aaKnown RBP15.28■□□□□ 0.04
SNX1-211ENST00000560829 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
SNX1-211ENST00000560829 WDR33Q9C0J8 1336 aaKnown RBP15.28■□□□□ 0.04
SNX1-211ENST00000560829 NPR1P16066 1061 aa15.27■□□□□ 0.04
SNX1-211ENST00000560829 PDE6BP35913 854 aa15.27■□□□□ 0.04
SNX1-211ENST00000560829 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.04
SNX1-211ENST00000560829 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.04
SNX1-211ENST00000560829 ZNF804AQ7Z570 1209 aa15.27■□□□□ 0.04
SNX1-211ENST00000560829 SP8Q8IXZ3 490 aa15.27■□□□□ 0.04
SNX1-211ENST00000560829 NACAP1Q9BZK3 213 aa15.27■□□□□ 0.04
SNX1-211ENST00000560829 ANO8Q9HCE9 1232 aaPredicted RBP15.27■□□□□ 0.04
SNX1-211ENST00000560829 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
SNX1-211ENST00000560829 MYO5AQ9Y4I1 1855 aaKnown RBP15.27■□□□□ 0.03
SNX1-211ENST00000560829 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 PFKFB2O60825 505 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 GJB2P29033 226 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 MCM5P33992 734 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 TBC1D10CQ8IV04 446 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 NAPBQ9H115 298 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 NSFL1CQ9UNZ2 370 aaKnown RBP15.27■□□□□ 0.03
SNX1-211ENST00000560829 SLC4A4Q9Y6R1 1079 aa15.27■□□□□ 0.03
SNX1-211ENST00000560829 CACNA1SQ13698 1873 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
SNX1-211ENST00000560829 UFL1O94874 794 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 SYT1P21579 422 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 FGD1P98174 961 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
SNX1-211ENST00000560829 SPTY2D1Q68D10 685 aaPredicted RBP15.26■□□□□ 0.03
SNX1-211ENST00000560829 RALYLQ86SE5 291 aaKnown RBP15.26■□□□□ 0.03
SNX1-211ENST00000560829 MIGA1Q8NAN2 632 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 ZNF274Q96GC6 653 aaPredicted RBP15.26■□□□□ 0.03
SNX1-211ENST00000560829 LRRC2Q9BYS8 371 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 ATP6V0A2Q9Y487 856 aa15.26■□□□□ 0.03
SNX1-211ENST00000560829 PRKAB2O43741 272 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 STX6O43752 255 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 MECOMQ03112 1051 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 TRDNQ13061 729 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 STK32BQ9NY57 414 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 PRC1O43663 620 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 TRAK2O60296 914 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 IL1R1P14778 569 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 ALDH1B1P30837 517 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 ANTXR2P58335 489 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
SNX1-211ENST00000560829 GIMAP6Q6P9H5 292 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 CHMP4CQ96CF2 233 aa15.25■□□□□ 0.03
SNX1-211ENST00000560829 LLPHQ9BRT6 129 aaKnown RBP15.25■□□□□ 0.03
SNX1-211ENST00000560829 ANKRD31Q8N7Z5 1873 aa15.24■□□□□ 0.03
SNX1-211ENST00000560829 TIAM2Q8IVF5 1701 aa15.24■□□□□ 0.03
SNX1-211ENST00000560829 ZSCAN22P10073 491 aaPredicted RBP15.24■□□□□ 0.03
SNX1-211ENST00000560829 PRDX5P30044 214 aa15.24■□□□□ 0.03
SNX1-211ENST00000560829 SKOR2Q2VWA4 1001 aaPredicted RBP15.24■□□□□ 0.03
SNX1-211ENST00000560829 MASTLQ96GX5 879 aa15.24■□□□□ 0.03
SNX1-211ENST00000560829 CD209Q9NNX6 404 aa15.24■□□□□ 0.03
SNX1-211ENST00000560829 POLLQ9UGP5 575 aa15.24■□□□□ 0.03
SNX1-211ENST00000560829 LTBP1Q14766 1721 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 PDCP20941 246 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 TDO2P48775 406 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 SCRN1Q12765 414 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 STAG1Q8WVM7 1258 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 ANAPC4Q9UJX5 808 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 DUOX1Q9NRD9 1551 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 LAMA4Q16363 1823 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 PDIA3P30101 505 aaKnown RBP15.23■□□□□ 0.03
SNX1-211ENST00000560829 STK3Q13188 491 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 AKNAD1Q5T1N1 836 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 CHST3Q7LGC8 479 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 CNNM2Q9H8M5 875 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 MTMR6Q9Y217 621 aa15.23■□□□□ 0.03
SNX1-211ENST00000560829 MAST2Q6P0Q8 1798 aa15.22■□□□□ 0.03
SNX1-211ENST00000560829 GSE1Q14687 1217 aa15.22■□□□□ 0.03
SNX1-211ENST00000560829 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
SNX1-211ENST00000560829 GPR101Q96P66 508 aaPredicted RBP15.22■□□□□ 0.03
SNX1-211ENST00000560829 QSER1Q2KHR3 1735 aa15.21■□□□□ 0.03
SNX1-211ENST00000560829 NEDD4P46934 1319 aa15.21■□□□□ 0.03
SNX1-211ENST00000560829 BAG6P46379 1132 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms