RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 ZSCAN16Q9H4T2 348 aaPredicted RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 MINPP1Q9UNW1 487 aa22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 TNRC6CQ9HCJ0 1690 aaKnown RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 MAST2Q6P0Q8 1798 aa22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 PDS5AQ29RF7 1337 aaKnown RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 SALL1Q9NSC2 1324 aa22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 DHX16O60231 1041 aaKnown RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 NASPP49321 788 aaPredicted RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 ANP32BQ92688 251 aaKnown RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 ARHGEF1Q92888 912 aaKnown RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 DENND2AQ9ULE3 1009 aa22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 NAP1L2Q9ULW6 460 aaPredicted RBP22.48■■□□□ 1.19
HMBOX1-215ENST00000560599 RFC4P35249 363 aa22.47■■□□□ 1.19
HMBOX1-215ENST00000560599 RESTQ13127 1097 aa22.47■■□□□ 1.19
HMBOX1-215ENST00000560599 TRAPPC3LQ5T215 181 aa22.47■■□□□ 1.19
HMBOX1-215ENST00000560599 NACAP1Q9BZK3 213 aa22.47■■□□□ 1.19
HMBOX1-215ENST00000560599 SCAND2PQ9GZW5 306 aaPredicted RBP22.47■■□□□ 1.19
HMBOX1-215ENST00000560599 NAPBQ9H115 298 aa22.47■■□□□ 1.19
HMBOX1-215ENST00000560599 LRP2BPQ9P2M1 347 aa22.47■■□□□ 1.19
HMBOX1-215ENST00000560599 SYCE3A1L190 88 aa22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 GOLGA8BA8MQT2 603 aa22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 ZBTB22O15209 634 aa22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 ANTXR2P58335 489 aa22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 RPS8P62241 208 aaKnown RBP22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 TBC1D10CQ8IV04 446 aa22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 CELF1Q92879 486 aaKnown RBP22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 NBPF3Q9H094 633 aa22.46■■□□□ 1.19
HMBOX1-215ENST00000560599 COL1A1P02452 1464 aaPredicted RBP22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 KLF18A0A0U1RQI7 1052 aa22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 CTDNEP1O95476 244 aa22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 CHST3Q7LGC8 479 aa22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 FERMT3Q86UX7 667 aa22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 VPS37DQ86XT2 251 aa22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 DDX11Q96FC9 970 aa22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 TMEM87BQ96K49 555 aa22.45■■□□□ 1.18
HMBOX1-215ENST00000560599 DTNBO60941 627 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 HMGB2P26583 209 aaKnown RBP22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 IFNL3Q8IZI9 196 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 TSPY26PQ9H489 355 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 CNNM2Q9H8M5 875 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 ARMT1Q9H993 441 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 EPB41L4AQ9HCS5 686 aaPredicted RBP22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 TCHHQ07283 1943 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 CHD4Q14839 1912 aa22.44■■□□□ 1.18
HMBOX1-215ENST00000560599 GYG1P46976 350 aa22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 CCT2P78371 535 aaKnown RBP22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 CCDC173Q0VFZ6 552 aa22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 TMED8Q6PL24 325 aaPredicted RBP22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 FAM196AQ6ZSG2 479 aa22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 ANGEL1Q9UNK9 670 aaKnown RBP22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 MYH15Q9Y2K3 1946 aa22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 UBR3Q6ZT12 1888 aa22.43■■□□□ 1.18
HMBOX1-215ENST00000560599 SH2B2O14492 632 aaPredicted RBP22.42■■□□□ 1.18
HMBOX1-215ENST00000560599 NPHP1O15259 732 aa22.42■■□□□ 1.18
HMBOX1-215ENST00000560599 SLC27A3Q5K4L6 730 aa22.42■■□□□ 1.18
HMBOX1-215ENST00000560599 RGS22Q8NE09 1264 aa22.42■■□□□ 1.18
HMBOX1-215ENST00000560599 MYH13Q9UKX3 1938 aa22.42■■□□□ 1.18
HMBOX1-215ENST00000560599 CYP7A1P22680 504 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 TDO2P48775 406 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 ATL3Q6DD88 541 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 FBXO33Q7Z6M2 555 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 LCORLQ8N3X6 602 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 KRT23Q9C075 422 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 NCOA5Q9HCD5 579 aaKnown RBP22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 RAI14Q9P0K7 980 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 SLC4A4Q9Y6R1 1079 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 TAF1P21675 1872 aa22.41■■□□□ 1.18
HMBOX1-215ENST00000560599 GSG1L2A8MUP6 293 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 TTC6Q86TZ1 520 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 RBSNQ9H1K0 784 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 CACNA1SQ13698 1873 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 DUOX1Q9NRD9 1551 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 MAGEB6P1A0A0J9YX57 407 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 IGSF3O75054 1194 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 CDKL5O76039 1030 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 AMIGO3Q86WK7 504 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 CNBD1Q8NA66 436 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 STAG1Q8WVM7 1258 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 FAM84BQ96KN1 310 aaPredicted RBP22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 SPATA32Q96LK8 384 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 MTA3Q9BTC8 594 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 RNF41Q9H4P4 317 aaPredicted RBP22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 GPHNQ9NQX3 736 aaPredicted RBP22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 CFAP45Q9UL16 551 aa22.4■■□□□ 1.18
HMBOX1-215ENST00000560599 NEDD4P46934 1319 aa22.39■■□□□ 1.18
HMBOX1-215ENST00000560599 CPLX1O14810 134 aa22.39■■□□□ 1.17
HMBOX1-215ENST00000560599 AKNAD1Q5T1N1 836 aa22.39■■□□□ 1.17
HMBOX1-215ENST00000560599 CPLX2Q6PUV4 134 aaKnown RBP22.39■■□□□ 1.17
HMBOX1-215ENST00000560599 CYB5R4Q7L1T6 521 aa22.39■■□□□ 1.17
HMBOX1-215ENST00000560599 LEO1Q8WVC0 666 aaPredicted RBP22.39■■□□□ 1.17
HMBOX1-215ENST00000560599 ABCF2Q9UG63 623 aa22.39■■□□□ 1.17
HMBOX1-215ENST00000560599 HPS5Q9UPZ3 1129 aa22.39■■□□□ 1.17
HMBOX1-215ENST00000560599 B4E1Z4 1266 aa22.38■■□□□ 1.17
HMBOX1-215ENST00000560599 GRAPQ13588 217 aa22.38■■□□□ 1.17
HMBOX1-215ENST00000560599 NFIXQ14938 502 aa22.38■■□□□ 1.17
HMBOX1-215ENST00000560599 GRAPLQ8TC17 118 aaPredicted RBP22.38■■□□□ 1.17
HMBOX1-215ENST00000560599 ZNF396Q96N95 335 aaPredicted RBP22.38■■□□□ 1.17
HMBOX1-215ENST00000560599 QTRT2Q9H974 415 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms