RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 EGFRP00533 1210 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 GSTT1P30711 240 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 CTSOP43234 321 aaPredicted RBP6.62□□□□□ -1.35
TPM1-222ENST00000560131 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
TPM1-222ENST00000560131 LRRC69Q6ZNQ3 347 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 NLRP13Q86W25 1043 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 C1orf127Q8N9H9 656 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 DCAF11Q8TEB1 546 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 SEC16BQ96JE7 1060 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 LRRC4BQ9NT99 713 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 KDM5DQ9BY66 1539 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 DAPK1P53355 1430 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 FSD2A1L4K1 749 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 XYLBO75191 536 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 ATP4AP20648 1035 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 PWP1Q13610 501 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 GRM2Q14416 872 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 TTC39BQ5VTQ0 682 aaPredicted RBP6.61□□□□□ -1.35
TPM1-222ENST00000560131 KIAA0319Q5VV43 1072 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 SDE2Q6IQ49 451 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 RELL1Q8IUW5 271 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 ACDQ96AP0 544 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 KBTBD4Q9NVX7 518 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
TPM1-222ENST00000560131 TBX22Q9Y458 520 aa6.61□□□□□ -1.35
TPM1-222ENST00000560131 KIAA1107Q9UPP5 1409 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 SBNO2Q9Y2G9 1366 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 CES1P23141 567 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 MSX1P28360 303 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 GRNP28799 593 aaKnown RBP6.6□□□□□ -1.35
TPM1-222ENST00000560131 TERF1P54274 439 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 HSP90AA2PQ14568 343 aaPredicted RBP6.6□□□□□ -1.35
TPM1-222ENST00000560131 ZMYM1Q5SVZ6 1142 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
TPM1-222ENST00000560131 ZNF662Q6ZS27 426 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 PRICKLE2Q7Z3G6 844 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 CEP63Q96MT8 703 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 SPON2Q9BUD6 331 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 TTF2Q9UNY4 1162 aaKnown RBP6.6□□□□□ -1.35
TPM1-222ENST00000560131 TRAK1Q9UPV9 953 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 CEP170Q5SW79 1584 aa6.6□□□□□ -1.35
TPM1-222ENST00000560131 ZNF608Q9ULD9 1512 aaPredicted RBP6.6□□□□□ -1.35
TPM1-222ENST00000560131 NINLQ9Y2I6 1382 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 CROCC2H7BZ55 1655 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 A0A1B0GTH6 734 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 A0A1W2PNR3 127 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 FRAT2O75474 233 aaPredicted RBP6.59□□□□□ -1.35
TPM1-222ENST00000560131 HSP90AA1P07900 732 aaKnown RBP6.59□□□□□ -1.35
TPM1-222ENST00000560131 TPM2P07951 284 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 TYRO3Q06418 890 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 BECN1Q14457 450 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 NFE2L2Q16236 605 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 EGFLAMQ63HQ2 1017 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 FOXR1Q6PIV2 292 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 LYSMD3Q7Z3D4 306 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 KIAA0825Q8IV33 1275 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 CKAP2LQ8IYA6 745 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 GLIS3Q8NEA6 775 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 ANKRD24Q8TF21 1146 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 NBPF4Q96M43 638 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 TIMMDC1Q9NPL8 285 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 RRAGDQ9NQL2 400 aaPredicted RBP6.59□□□□□ -1.35
TPM1-222ENST00000560131 GJA3Q9Y6H8 435 aa6.59□□□□□ -1.35
TPM1-222ENST00000560131 EPRSP07814 1512 aaKnown RBP6.59□□□□□ -1.35
TPM1-222ENST00000560131 CAMSAP2Q08AD1 1489 aa6.59□□□□□ -1.36
TPM1-222ENST00000560131 A0A1W2PP55 124 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
TPM1-222ENST00000560131 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.58□□□□□ -1.36
TPM1-222ENST00000560131 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 RNF217Q8TC41 542 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 GMCL1Q96IK5 515 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 EHD4Q9H223 541 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 PNNQ9H307 717 aaKnown RBP6.58□□□□□ -1.36
TPM1-222ENST00000560131 MKL2Q9ULH7 1088 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 WDR62O43379 1518 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 ITSN2Q9NZM3 1697 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 ABCC5O15440 1437 aa6.58□□□□□ -1.36
TPM1-222ENST00000560131 PLXNC1O60486 1568 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 MINDY4BA8MYZ0 360 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 RLBP1P12271 317 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 XRCC5P13010 732 aaKnown RBP6.57□□□□□ -1.36
TPM1-222ENST00000560131 EDN3P14138 238 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 ITGB7P26010 798 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
TPM1-222ENST00000560131 SNRPNP63162 240 aaKnown RBP6.57□□□□□ -1.36
TPM1-222ENST00000560131 CALD1Q05682 793 aaKnown RBP6.57□□□□□ -1.36
TPM1-222ENST00000560131 BMS1Q14692 1282 aaKnown RBP6.57□□□□□ -1.36
TPM1-222ENST00000560131 CCDC85BQ15834 202 aaPredicted RBP6.57□□□□□ -1.36
TPM1-222ENST00000560131 NGEFQ8N5V2 710 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 MKL1Q969V6 931 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 MRFAP1L1Q96HT8 127 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 TMEM74Q96NL1 305 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 PDCL3Q9H2J4 239 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 SEMA6BQ9H3T3 888 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 ADAMTS1Q9UHI8 967 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 POLA1P09884 1462 aaPredicted RBP6.57□□□□□ -1.36
TPM1-222ENST00000560131 NLRP1Q9C000 1473 aa6.57□□□□□ -1.36
TPM1-222ENST00000560131 GPRASP1Q5JY77 1395 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms