RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SLC4A2P04920 1241 aa25.82■■□□□ 1.72
PSEN1-225ENST00000560005 SLC4A8Q2Y0W8 1093 aa25.82■■□□□ 1.72
PSEN1-225ENST00000560005 CNKSR2Q8WXI2 1034 aa25.82■■□□□ 1.72
PSEN1-225ENST00000560005 ARHGEF6Q15052 776 aa25.81■■□□□ 1.72
PSEN1-225ENST00000560005 TAF1CQ15572 869 aaPredicted RBP25.81■■□□□ 1.72
PSEN1-225ENST00000560005 CDAN1Q8IWY9 1227 aa25.81■■□□□ 1.72
PSEN1-225ENST00000560005 ZFYVE28Q9HCC9 887 aa25.81■■□□□ 1.72
PSEN1-225ENST00000560005 CCL15-CCL14A0A0B4J2E2 113 aa25.8■■□□□ 1.72
PSEN1-225ENST00000560005 TNFAIP1Q13829 316 aa25.8■■□□□ 1.72
PSEN1-225ENST00000560005 CCL15Q16663 113 aa25.8■■□□□ 1.72
PSEN1-225ENST00000560005 IFIT5Q13325 482 aaKnown RBP25.79■■□□□ 1.72
PSEN1-225ENST00000560005 TWISTNBQ3B726 338 aaPredicted RBP25.79■■□□□ 1.72
PSEN1-225ENST00000560005 SPDYE2Q495Y8 402 aa25.79■■□□□ 1.72
PSEN1-225ENST00000560005 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.79■■□□□ 1.72
PSEN1-225ENST00000560005 ZNF70Q9UC06 446 aaPredicted RBP25.79■■□□□ 1.72
PSEN1-225ENST00000560005 FANCIQ9NVI1 1328 aa25.79■■□□□ 1.72
PSEN1-225ENST00000560005 FLIIQ13045 1269 aa25.78■■□□□ 1.72
PSEN1-225ENST00000560005 FAM43AQ8N2R8 423 aa25.78■■□□□ 1.72
PSEN1-225ENST00000560005 LINS1Q8NG48 757 aa25.78■■□□□ 1.72
PSEN1-225ENST00000560005 TEPSINQ96N21 525 aa25.78■■□□□ 1.72
PSEN1-225ENST00000560005 TDRD3Q9H7E2 651 aaKnown RBP25.78■■□□□ 1.72
PSEN1-225ENST00000560005 CHMP3Q9Y3E7 222 aa25.78■■□□□ 1.72
PSEN1-225ENST00000560005 H0YGN5 161 aa25.77■■□□□ 1.72
PSEN1-225ENST00000560005 GTF2A2P52657 109 aa25.77■■□□□ 1.72
PSEN1-225ENST00000560005 RRP1P56182 461 aaKnown RBP25.77■■□□□ 1.72
PSEN1-225ENST00000560005 VGLL4Q14135 290 aa25.77■■□□□ 1.72
PSEN1-225ENST00000560005 DNAAF4Q8WXU2 420 aa25.77■■□□□ 1.72
PSEN1-225ENST00000560005 RANBP2P49792 3224 aaKnown RBP25.76■■□□□ 1.71
PSEN1-225ENST00000560005 FKBP5Q13451 457 aaPredicted RBP25.76■■□□□ 1.71
PSEN1-225ENST00000560005 SH3TC2Q8TF17 1288 aa25.76■■□□□ 1.71
PSEN1-225ENST00000560005 OTUD5Q96G74 571 aa25.76■■□□□ 1.71
PSEN1-225ENST00000560005 TTF2Q9UNY4 1162 aaKnown RBP25.76■■□□□ 1.71
PSEN1-225ENST00000560005 PLIN1O60240 522 aa25.75■■□□□ 1.71
PSEN1-225ENST00000560005 FOXO4P98177 505 aa25.75■■□□□ 1.71
PSEN1-225ENST00000560005 MFSD14BQ5SR56 506 aa25.75■■□□□ 1.71
PSEN1-225ENST00000560005 TMEM39BQ9GZU3 492 aa25.75■■□□□ 1.71
PSEN1-225ENST00000560005 SERPINA10Q9UK55 444 aa25.75■■□□□ 1.71
PSEN1-225ENST00000560005 FAM205AQ6ZU69 1335 aa25.74■■□□□ 1.71
PSEN1-225ENST00000560005 TCP10L2B9ZVM9 353 aa25.74■■□□□ 1.71
PSEN1-225ENST00000560005 MAP3K9P80192 1104 aa25.74■■□□□ 1.71
PSEN1-225ENST00000560005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.74■■□□□ 1.71
PSEN1-225ENST00000560005 ARHGAP39Q9C0H5 1083 aa25.74■■□□□ 1.71
PSEN1-225ENST00000560005 CSADQ9Y600 493 aa25.74■■□□□ 1.71
PSEN1-225ENST00000560005 ZSWIM8A7E2V4 1837 aa25.74■■□□□ 1.71
PSEN1-225ENST00000560005 DZIP1LQ8IYY4 767 aaKnown RBP25.73■■□□□ 1.71
PSEN1-225ENST00000560005 ZNF594Q96JF6 807 aaPredicted RBP25.73■■□□□ 1.71
PSEN1-225ENST00000560005 WDHD1O75717 1129 aaPredicted RBP25.71■■□□□ 1.71
PSEN1-225ENST00000560005 EXOSC9Q06265 439 aaKnown RBP25.71■■□□□ 1.71
PSEN1-225ENST00000560005 TAF7LQ5H9L4 462 aa25.71■■□□□ 1.71
PSEN1-225ENST00000560005 LDHAL6AQ6ZMR3 332 aa25.71■■□□□ 1.71
PSEN1-225ENST00000560005 CNNM1Q9NRU3 951 aa25.71■■□□□ 1.71
PSEN1-225ENST00000560005 ARAP2Q8WZ64 1704 aa25.71■■□□□ 1.71
PSEN1-225ENST00000560005 TLR2O60603 784 aa25.7■■□□□ 1.7
PSEN1-225ENST00000560005 TNNI2P48788 182 aa25.7■■□□□ 1.7
PSEN1-225ENST00000560005 LACTBP83111 547 aaPredicted RBP25.7■■□□□ 1.7
PSEN1-225ENST00000560005 KIF22Q14807 665 aa25.7■■□□□ 1.7
PSEN1-225ENST00000560005 LMBR1LQ6UX01 489 aa25.7■■□□□ 1.7
PSEN1-225ENST00000560005 CHRDL2Q6WN34 429 aa25.7■■□□□ 1.7
PSEN1-225ENST00000560005 TDRD7Q8NHU6 1098 aaKnown RBP25.7■■□□□ 1.7
PSEN1-225ENST00000560005 SPDYE5A6NIY4 337 aa25.69■■□□□ 1.7
PSEN1-225ENST00000560005 CRKP46108 304 aa25.69■■□□□ 1.7
PSEN1-225ENST00000560005 GYG1P46976 350 aa25.69■■□□□ 1.7
PSEN1-225ENST00000560005 CCDC57Q2TAC2 916 aa25.69■■□□□ 1.7
PSEN1-225ENST00000560005 RARSP54136 660 aaKnown RBP25.68■■□□□ 1.7
PSEN1-225ENST00000560005 EPHA10Q5JZY3 1008 aa25.68■■□□□ 1.7
PSEN1-225ENST00000560005 SNCAIPQ9Y6H5 919 aa25.68■■□□□ 1.7
PSEN1-225ENST00000560005 BTBD19C9JJ37 291 aa25.67■■□□□ 1.7
PSEN1-225ENST00000560005 ECM2O94769 699 aaPredicted RBP25.67■■□□□ 1.7
PSEN1-225ENST00000560005 CETPP11597 493 aa25.67■■□□□ 1.7
PSEN1-225ENST00000560005 HIBADHP31937 336 aaKnown RBP25.67■■□□□ 1.7
PSEN1-225ENST00000560005 ALDH1L2Q3SY69 923 aa25.66■■□□□ 1.7
PSEN1-225ENST00000560005 FAM84BQ96KN1 310 aaPredicted RBP25.66■■□□□ 1.7
PSEN1-225ENST00000560005 ZCCHC17Q9NP64 241 aaKnown RBP25.66■■□□□ 1.7
PSEN1-225ENST00000560005 F6X3S4 739 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 GNRH1P01148 92 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 CACNB3P54284 484 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 MTFR1Q15390 333 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 GRIK5Q16478 980 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 ERO1BQ86YB8 467 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 DPF3Q92784 378 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 SHISA4Q96DD7 197 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 WRNIP1Q96S55 665 aa25.65■■□□□ 1.7
PSEN1-225ENST00000560005 RBM27Q9P2N5 1060 aaKnown RBP25.65■■□□□ 1.7
PSEN1-225ENST00000560005 IRF6O14896 467 aa25.64■■□□□ 1.7
PSEN1-225ENST00000560005 MS4A1P11836 297 aa25.64■■□□□ 1.7
PSEN1-225ENST00000560005 PRMT2P55345 433 aa25.64■■□□□ 1.7
PSEN1-225ENST00000560005 SNAPC2Q13487 334 aa25.64■■□□□ 1.7
PSEN1-225ENST00000560005 UBE4AQ14139 1066 aa25.64■■□□□ 1.7
PSEN1-225ENST00000560005 BEND3Q5T5X7 828 aa25.64■■□□□ 1.7
PSEN1-225ENST00000560005 ZKSCAN4Q969J2 545 aaPredicted RBP25.64■■□□□ 1.7
PSEN1-225ENST00000560005 CACNA1FO60840 1977 aa25.62■■□□□ 1.69
PSEN1-225ENST00000560005 IQSEC3Q9UPP2 1182 aaPredicted RBP25.62■■□□□ 1.69
PSEN1-225ENST00000560005 GRM8O00222 908 aa25.61■■□□□ 1.69
PSEN1-225ENST00000560005 CTGFP29279 349 aa25.61■■□□□ 1.69
PSEN1-225ENST00000560005 PPIL2Q13356 520 aa25.61■■□□□ 1.69
PSEN1-225ENST00000560005 PPP4R2Q9NY27 417 aa25.61■■□□□ 1.69
PSEN1-225ENST00000560005 CPA4Q9UI42 421 aa25.61■■□□□ 1.69
PSEN1-225ENST00000560005 IRX6P78412 446 aaPredicted RBP25.6■■□□□ 1.69
PSEN1-225ENST00000560005 CHAF1AQ13111 956 aaPredicted RBP25.6■■□□□ 1.69
PSEN1-225ENST00000560005 PDE3AQ14432 1141 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms