RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 HCLS1P14317 486 aaPredicted RBP9.48□□□□□ -0.89
SMAD3-212ENST00000559937 LIG1P18858 919 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 GNAT2P19087 354 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 ADD1P35611 737 aaKnown RBP9.48□□□□□ -0.89
SMAD3-212ENST00000559937 IGHMBP2P38935 993 aaKnown RBP9.48□□□□□ -0.89
SMAD3-212ENST00000559937 MAP3K12Q12852 859 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 ITPK1Q13572 414 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 SLC9C2Q5TAH2 1124 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.48□□□□□ -0.89
SMAD3-212ENST00000559937 DDX11Q96FC9 970 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 TMEM87BQ96K49 555 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 MPHOSPH8Q99549 860 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 MTA3Q9BTC8 594 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 CNTNAP4Q9C0A0 1308 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 ZNF532Q9HCE3 1301 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 NID2Q14112 1375 aa9.48□□□□□ -0.89
SMAD3-212ENST00000559937 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 A0A0G2JLW4 131 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 KLF18A0A0U1RQI7 1052 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 ZBTB22O15209 634 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 KDM4AO75164 1064 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 CDKL5O76039 1030 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 TPM3P06753 285 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 TERF1P54274 439 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 ANTXR2P58335 489 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 VPS72Q15906 364 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 GIMAP6Q6P9H5 292 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 PI16Q6UXB8 463 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 BRAPQ7Z569 592 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 SPATA5Q8NB90 893 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 FAM200AQ8TCP9 573 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 PGBD1Q96JS3 809 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
SMAD3-212ENST00000559937 USP25Q9UHP3 1055 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 PNPLA7Q6ZV29 1317 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 CACNA1SQ13698 1873 aa9.47□□□□□ -0.89
SMAD3-212ENST00000559937 GOLGA8BA8MQT2 603 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 PATL2C9JE40 543 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 SH2B2O14492 632 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 OFD1O75665 1012 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 IDH1O75874 414 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 YEATS4O95619 227 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 PTMAP06454 111 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 HAND2P61296 217 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 CCT2P78371 535 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 TYRO3Q06418 890 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 SF3B3Q15393 1217 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 TMED8Q6PL24 325 aaPredicted RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 CPLX2Q6PUV4 134 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 SGMS1Q86VZ5 419 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 BICD2Q8TD16 824 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 AIDAQ96BJ3 306 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 STRBPQ96SI9 672 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 NBPF3Q9H094 633 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 CNNM2Q9H8M5 875 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 DACT1Q9NYF0 836 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 ANGEL1Q9UNK9 670 aaKnown RBP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 NIP7Q9Y221 180 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMAD3-212ENST00000559937 ZNF804BA4D1E1 1349 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 TAF1P21675 1872 aa9.46□□□□□ -0.9
SMAD3-212ENST00000559937 A0A1W2PQ27 194 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 A0A1W2PQ64 194 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 A0A1W2PQD8 194 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 CPLX1O14810 134 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 DTNBO60941 627 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 IGSF3O75054 1194 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 ADCY5O95622 1261 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
SMAD3-212ENST00000559937 LIFRP42702 1097 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 RCAN1P53805 252 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 RASGRF1Q13972 1273 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 UBE4AQ14139 1066 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
SMAD3-212ENST00000559937 CCDC73Q6ZRK6 1079 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 TBC1D10CQ8IV04 446 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 FBXO18Q8NFZ0 1043 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 C8orf76Q96K31 380 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 RTEL1Q9NZ71 1219 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
SMAD3-212ENST00000559937 ORC3Q9UBD5 711 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-212ENST00000559937 WWC3Q9ULE0 1092 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-212ENST00000559937 PDS5AQ29RF7 1337 aaKnown RBP9.45□□□□□ -0.9
SMAD3-212ENST00000559937 STK36Q9NRP7 1315 aa9.45□□□□□ -0.9
SMAD3-212ENST00000559937 MYH2Q9UKX2 1941 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 SLC10A5Q5PT55 438 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 SASS6Q6UVJ0 657 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 CCDC125Q86Z20 511 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 HELBQ8NG08 1087 aaPredicted RBP9.44□□□□□ -0.9
SMAD3-212ENST00000559937 TDRD7Q8NHU6 1098 aaKnown RBP9.44□□□□□ -0.9
SMAD3-212ENST00000559937 KCNG4Q8TDN1 519 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 USP28Q96RU2 1077 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 NACAP1Q9BZK3 213 aa9.44□□□□□ -0.9
SMAD3-212ENST00000559937 KRT23Q9C075 422 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms