RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 CENPFP49454 3210 aa13.76□□□□□ -0.21
TRAF3-207ENST00000559734 CSF1RP07333 972 aa13.76□□□□□ -0.21
TRAF3-207ENST00000559734 TNNI2P48788 182 aa13.76□□□□□ -0.21
TRAF3-207ENST00000559734 LACTBP83111 547 aaPredicted RBP13.76□□□□□ -0.21
TRAF3-207ENST00000559734 IFIT5Q13325 482 aaKnown RBP13.76□□□□□ -0.21
TRAF3-207ENST00000559734 MTFR1Q15390 333 aa13.76□□□□□ -0.21
TRAF3-207ENST00000559734 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
TRAF3-207ENST00000559734 MFSD14BQ5SR56 506 aa13.76□□□□□ -0.21
TRAF3-207ENST00000559734 C15orf52Q6ZUT6 534 aaKnown RBP13.76□□□□□ -0.21
TRAF3-207ENST00000559734 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF3-207ENST00000559734 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
TRAF3-207ENST00000559734 TLR2O60603 784 aa13.75□□□□□ -0.21
TRAF3-207ENST00000559734 CASP7P55210 303 aa13.75□□□□□ -0.21
TRAF3-207ENST00000559734 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
TRAF3-207ENST00000559734 TEPSINQ96N21 525 aa13.75□□□□□ -0.21
TRAF3-207ENST00000559734 BTBD19C9JJ37 291 aa13.74□□□□□ -0.21
TRAF3-207ENST00000559734 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
TRAF3-207ENST00000559734 CETPP11597 493 aa13.74□□□□□ -0.21
TRAF3-207ENST00000559734 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-207ENST00000559734 DZIP1LQ8IYY4 767 aaKnown RBP13.74□□□□□ -0.21
TRAF3-207ENST00000559734 ZNF594Q96JF6 807 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-207ENST00000559734 WRNIP1Q96S55 665 aa13.74□□□□□ -0.21
TRAF3-207ENST00000559734 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
TRAF3-207ENST00000559734 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
TRAF3-207ENST00000559734 TRIOBPQ9H2D6 2365 aa13.74□□□□□ -0.21
TRAF3-207ENST00000559734 SPDYE5A6NIY4 337 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 CRKP46108 304 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 CACNB3P54284 484 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
TRAF3-207ENST00000559734 RAET1EQ8TD07 263 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 DNAAF4Q8WXU2 420 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 HTATIP2Q9BUP3 242 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 BIN2Q9UBW5 565 aaPredicted RBP13.73□□□□□ -0.21
TRAF3-207ENST00000559734 CPA4Q9UI42 421 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 SNCAIPQ9Y6H5 919 aa13.73□□□□□ -0.21
TRAF3-207ENST00000559734 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
TRAF3-207ENST00000559734 GNRH1P01148 92 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 PSMC4P43686 418 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 GYG1P46976 350 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 PRMT2P55345 433 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 FLIIQ13045 1269 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 SNAPC2Q13487 334 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
TRAF3-207ENST00000559734 LDHAL6AQ6ZMR3 332 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 ERO1BQ86YB8 467 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 LINS1Q8NG48 757 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
TRAF3-207ENST00000559734 FAM205AQ6ZU69 1335 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 MYPNQ86TC9 1320 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 IRF6O14896 467 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 CCL5P13501 91 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
TRAF3-207ENST00000559734 GRK4P32298 578 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 FOXO4P98177 505 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.21
TRAF3-207ENST00000559734 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 ZKSCAN4Q969J2 545 aaPredicted RBP13.71□□□□□ -0.21
TRAF3-207ENST00000559734 RNF208Q9H0X6 261 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 SRRDQ9UH36 339 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 IQSEC3Q9UPP2 1182 aaPredicted RBP13.71□□□□□ -0.21
TRAF3-207ENST00000559734 NR2E3Q9Y5X4 410 aa13.71□□□□□ -0.21
TRAF3-207ENST00000559734 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 OSBPP22059 807 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 HOXD10P28358 340 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 CTGFP29279 349 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 LMBR1LQ6UX01 489 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-207ENST00000559734 TDRD7Q8NHU6 1098 aaKnown RBP13.7□□□□□ -0.22
TRAF3-207ENST00000559734 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 ZCCHC17Q9NP64 241 aaKnown RBP13.7□□□□□ -0.22
TRAF3-207ENST00000559734 TMOD2Q9NZR1 351 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 RIPOR2Q9Y4F9 1068 aa13.7□□□□□ -0.22
TRAF3-207ENST00000559734 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
TRAF3-207ENST00000559734 GJA8P48165 433 aa13.69□□□□□ -0.22
TRAF3-207ENST00000559734 UBXN2AP68543 259 aa13.69□□□□□ -0.22
TRAF3-207ENST00000559734 PPIL2Q13356 520 aa13.69□□□□□ -0.22
TRAF3-207ENST00000559734 GRIK5Q16478 980 aa13.69□□□□□ -0.22
TRAF3-207ENST00000559734 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
TRAF3-207ENST00000559734 PDHXO00330 501 aa13.68□□□□□ -0.22
TRAF3-207ENST00000559734 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-207ENST00000559734 GJB1P08034 283 aa13.68□□□□□ -0.22
TRAF3-207ENST00000559734 EPHA10Q5JZY3 1008 aa13.68□□□□□ -0.22
TRAF3-207ENST00000559734 C17orf99Q6UX52 265 aa13.68□□□□□ -0.22
TRAF3-207ENST00000559734 MIGA2Q7L4E1 593 aa13.68□□□□□ -0.22
TRAF3-207ENST00000559734 F6X3S4 739 aa13.67□□□□□ -0.22
TRAF3-207ENST00000559734 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-207ENST00000559734 PRKCZQ05513 592 aa13.67□□□□□ -0.22
TRAF3-207ENST00000559734 UBE4AQ14139 1066 aa13.67□□□□□ -0.22
TRAF3-207ENST00000559734 DCAF15Q66K64 600 aa13.67□□□□□ -0.22
TRAF3-207ENST00000559734 U2AF1L4Q8WU68 220 aaKnown RBP13.67□□□□□ -0.22
TRAF3-207ENST00000559734 TEKT1Q969V4 418 aa13.67□□□□□ -0.22
TRAF3-207ENST00000559734 HOOK2Q96ED9 719 aa13.67□□□□□ -0.22
TRAF3-207ENST00000559734 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
TRAF3-207ENST00000559734 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-207ENST00000559734 CEP290O15078 2479 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 SOX1O00570 391 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-207ENST00000559734 EVI5O60447 810 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 INPP5BP32019 993 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 FCGRTP55899 365 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms