RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MRIQ9BWK5 157 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 GBA2Q9HCG7 927 aaPredicted RBP5.39□□□□□ -1.55
SNX1-205ENST00000559339 TMOD2Q9NZR1 351 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 DENND2AQ9ULE3 1009 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 TNNQ9UQP3 1299 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 PPP2R3BQ9Y5P8 575 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 PCNTO95613 3336 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 CNTNAP1P78357 1384 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 PPP1R12BO60237 982 aaPredicted RBP5.38□□□□□ -1.55
SNX1-205ENST00000559339 LDHBP07195 334 aaKnown RBP5.38□□□□□ -1.55
SNX1-205ENST00000559339 MAP2K2P36507 400 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 CRKP46108 304 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 VEGFBP49765 207 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 HUNKP57058 714 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 HDLBPQ00341 1268 aaKnown RBP5.38□□□□□ -1.55
SNX1-205ENST00000559339 FMR1Q06787 632 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNX1-205ENST00000559339 NOGQ13253 232 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 CCDC158Q5M9N0 1113 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 SPTY2D1Q68D10 685 aaPredicted RBP5.38□□□□□ -1.55
SNX1-205ENST00000559339 ARMC9Q7Z3E5 817 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 SSH3Q8TE77 659 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 CDCA5Q96FF9 252 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 XAGE2Q96GT9 111 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 CAPNS2Q96L46 248 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 PRMT6Q96LA8 375 aaPredicted RBP5.38□□□□□ -1.55
SNX1-205ENST00000559339 DEFB129Q9H1M3 183 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 C1orf115Q9H7X2 142 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 VEZTQ9HBM0 779 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 COG6Q9Y2V7 657 aa5.38□□□□□ -1.55
SNX1-205ENST00000559339 ASTN2O75129 1339 aaPredicted RBP5.38□□□□□ -1.55
SNX1-205ENST00000559339 WDR33Q9C0J8 1336 aaKnown RBP5.38□□□□□ -1.55
SNX1-205ENST00000559339 ADAMTSL1Q8N6G6 1762 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 CLRN2A0PK11 232 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 UQCRFS1P1P0C7P4 283 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 PHKA1P46020 1223 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 ZNF157P51786 506 aaPredicted RBP5.37□□□□□ -1.55
SNX1-205ENST00000559339 SPDYE2Q495Y8 402 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 TTC39AQ5SRH9 613 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 CYP4F22Q6NT55 531 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 RGMBQ6NW40 437 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 CEP85Q6P2H3 762 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 HHIPL2Q6UWX4 724 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 DZIP1Q86YF9 867 aaKnown RBP5.37□□□□□ -1.55
SNX1-205ENST00000559339 HOOK2Q96ED9 719 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 ZBED3Q96IU2 234 aaPredicted RBP5.37□□□□□ -1.55
SNX1-205ENST00000559339 ZDHHC15Q96MV8 337 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 GPR108Q9NPR9 543 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 ZBTB40Q9NUA8 1239 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 ABCF2Q9UG63 623 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 NOP58Q9Y2X3 529 aaKnown RBP5.37□□□□□ -1.55
SNX1-205ENST00000559339 PDS5AQ29RF7 1337 aaKnown RBP5.37□□□□□ -1.55
SNX1-205ENST00000559339 SALL1Q9NSC2 1324 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 SPEF2Q9C093 1822 aa5.37□□□□□ -1.55
SNX1-205ENST00000559339 SCN9AQ15858 1988 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 UNCXA6NJT0 531 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 CA12O43570 354 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 IGSF3O75054 1194 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 RAB11FIP3O75154 756 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 HSPA1AP0DMV8 641 aaKnown RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 HSPA1BP0DMV9 641 aaKnown RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 PRDX5P30044 214 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 ADORA1P30542 326 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 IREB2P48200 963 aaKnown RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 GSTO1P78417 241 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 RASGRF1Q13972 1273 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 RASA3Q14644 834 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 TNNI3KQ59H18 835 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 PRAMEF18Q5VWM3 479 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 DLK2Q6UY11 383 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 ERICH6Q7L0X2 663 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 REM2Q8IYK8 340 aaPredicted RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 CLASRPQ8N2M8 674 aaKnown RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 SPATA5Q8NB90 893 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 KIF1BPQ96EK5 621 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 NOL10Q9BSC4 688 aaKnown RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 TDRD3Q9H7E2 651 aaKnown RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 LRP2BPQ9P2M1 347 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 ZNF70Q9UC06 446 aaPredicted RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 SCAF8Q9UPN6 1271 aaKnown RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 FPGT-TNNI3KV9GXZ4 949 aa5.36□□□□□ -1.55
SNX1-205ENST00000559339 COL1A1P02452 1464 aaPredicted RBP5.36□□□□□ -1.55
SNX1-205ENST00000559339 TCP10L2B9ZVM9 353 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 APBB1O00213 710 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 LDHCP07864 332 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 IFIT2P09913 472 aaKnown RBP5.35□□□□□ -1.55
SNX1-205ENST00000559339 ARID4AP29374 1257 aaPredicted RBP5.35□□□□□ -1.55
SNX1-205ENST00000559339 CTCFP49711 727 aaPredicted RBP5.35□□□□□ -1.55
SNX1-205ENST00000559339 PRKG1Q13976 671 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 C20orf194Q5TEA3 1177 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 FKBP1CQ5VVH2 108 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 APOBEC3HQ6NTF7 200 aaKnown RBP5.35□□□□□ -1.55
SNX1-205ENST00000559339 FAM83AQ86UY5 434 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 AACSQ86V21 672 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 SLC10A4Q96EP9 437 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 ZNF512BQ96KM6 892 aaPredicted RBP5.35□□□□□ -1.55
SNX1-205ENST00000559339 BCL11AQ9H165 835 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 WBP1LQ9NX94 342 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 RAI14Q9P0K7 980 aa5.35□□□□□ -1.55
SNX1-205ENST00000559339 ZBTB47Q9UFB7 747 aaPredicted RBP5.35□□□□□ -1.55
SNX1-205ENST00000559339 ANGEL1Q9UNK9 670 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms