RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-215ENST00000559201 KRT85P78386 507 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 ST3GAL1Q11201 340 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 NFIXQ14938 502 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 SLFNL1Q499Z3 407 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
LRRC49-215ENST00000559201 C15orf52Q6ZUT6 534 aaKnown RBP12.62□□□□□ -0.39
LRRC49-215ENST00000559201 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 TMTC2Q8N394 836 aa12.62□□□□□ -0.39
LRRC49-215ENST00000559201 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
LRRC49-215ENST00000559201 FAM84BQ96KN1 310 aaPredicted RBP12.62□□□□□ -0.39
LRRC49-215ENST00000559201 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
LRRC49-215ENST00000559201 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
LRRC49-215ENST00000559201 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
LRRC49-215ENST00000559201 H3BQV1 296 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 PLSCR1O15162 318 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 CDKL5O76039 1030 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 PDIA3P30101 505 aaKnown RBP12.61□□□□□ -0.39
LRRC49-215ENST00000559201 IFFO2Q5TF58 517 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 FOXD4L5Q5VV16 416 aaPredicted RBP12.61□□□□□ -0.39
LRRC49-215ENST00000559201 TTLL5Q6EMB2 1281 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 USP48Q86UV5 1035 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 CERS3Q8IU89 383 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 FOXD4L4Q8WXT5 416 aaPredicted RBP12.61□□□□□ -0.39
LRRC49-215ENST00000559201 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
LRRC49-215ENST00000559201 TCEANC2Q96MN5 208 aa12.61□□□□□ -0.39
LRRC49-215ENST00000559201 BTAF1O14981 1849 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 MAGEB6P1A0A0J9YX57 407 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 MBD4O95243 580 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 CYP7A1P22680 504 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 SCRN1Q12765 414 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 STK3Q13188 491 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
LRRC49-215ENST00000559201 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 LRRC4BQ9NT99 713 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 ELP1O95163 1332 aa12.6□□□□□ -0.39
LRRC49-215ENST00000559201 DDX60Q8IY21 1712 aaKnown RBP12.59□□□□□ -0.39
LRRC49-215ENST00000559201 GSG1L2A8MUP6 293 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 SERPINB2P05120 415 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 GYS1P13807 737 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 LIFRP42702 1097 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 GYG1P46976 350 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 RCAN1P53805 252 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 APOBRQ0VD83 1088 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 SART3Q15020 963 aaKnown RBP12.59□□□□□ -0.39
LRRC49-215ENST00000559201 PPP2R5BQ15173 497 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
LRRC49-215ENST00000559201 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 NLGN1Q8N2Q7 840 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
LRRC49-215ENST00000559201 WDR66Q8TBY9 1149 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 ANP32BQ92688 251 aaKnown RBP12.59□□□□□ -0.39
LRRC49-215ENST00000559201 ANAPC4Q9UJX5 808 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 ANGEL1Q9UNK9 670 aaKnown RBP12.59□□□□□ -0.39
LRRC49-215ENST00000559201 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 XDHP47989 1333 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 SALL1Q9NSC2 1324 aa12.59□□□□□ -0.39
LRRC49-215ENST00000559201 LY75O60449 1722 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 HOXA10P31260 410 aaPredicted RBP12.58□□□□□ -0.4
LRRC49-215ENST00000559201 TDO2P48775 406 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 HAND2P61296 217 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 GSTO1P78417 241 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 ZSCAN23Q3MJ62 389 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 CRY2Q49AN0 593 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 AKNAD1Q5T1N1 836 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 PRR5LQ6MZQ0 368 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 STAG1Q8WVM7 1258 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 CRAMP1Q96RY5 1269 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 BRIP1Q9BX63 1249 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 ARMT1Q9H993 441 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 ABCF2Q9UG63 623 aa12.58□□□□□ -0.4
LRRC49-215ENST00000559201 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
LRRC49-215ENST00000559201 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 KLF18A0A0U1RQI7 1052 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 PTPDC1A2A3K4 754 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
LRRC49-215ENST00000559201 SNAP23O00161 211 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
LRRC49-215ENST00000559201 CPLX1O14810 134 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 TRIM37O94972 964 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 LDHCP07864 332 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 XRCC6P12956 609 aaKnown RBP eCLIP12.57□□□□□ -0.4
LRRC49-215ENST00000559201 TXNRD1Q16881 649 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 LRSAM1Q6UWE0 723 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 ZNF396Q96N95 335 aaPredicted RBP12.57□□□□□ -0.4
LRRC49-215ENST00000559201 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 COL24A1Q17RW2 1714 aa12.57□□□□□ -0.4
LRRC49-215ENST00000559201 CCDC196A0A1B0GTZ2 297 aa12.56□□□□□ -0.4
LRRC49-215ENST00000559201 ERICH2A1L162 156 aa12.56□□□□□ -0.4
LRRC49-215ENST00000559201 SLC3A2P08195 630 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms