RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 TSPY2A6NKD2 308 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 GOLGA6L6A8MZA4 724 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 TSPY3P0CV98 308 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 TSPY8P0CW00 308 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 TNFAIP3P21580 790 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 TSPY1Q01534 308 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 CLASRPQ8N2M8 674 aaKnown RBP6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 PARD3BQ8TEW8 1205 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 TMCC3Q9ULS5 477 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 SMC3Q9UQE7 1217 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 ASXL1Q8IXJ9 1541 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 F6X3S4 739 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 TMEM87BQ96K49 555 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 PDGFDQ9GZP0 370 aaPredicted RBP6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 FAM50BQ9Y247 325 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 ANKRD30AQ9BXX3 1397 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 A0A1W2PRQ8 180 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 SPTLC1O15269 473 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 RAPGEF3O95398 923 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 CLK1P49759 484 aaKnown RBP6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 SPICE1Q8N0Z3 855 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 STK11IPQ8N1F8 1099 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 NKX2-3Q8TAU0 364 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 TBC1D31Q96DN5 1066 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 TSKSQ9UJT2 592 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 ANKRD50Q9ULJ7 1429 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 QRICH2Q9H0J4 1663 aa6.85□□□□□ -1.31
CTDSPL2-206ENST00000559175 DCCP43146 1447 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 KDM4FA0A1W2PPD8 638 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 LETM1O95202 739 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 MZF1P28698 734 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 MCL1Q07820 350 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 RASA3Q14644 834 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 ITFG2Q969R8 447 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 SCLT1Q96NL6 688 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 OAS2P29728 719 aaKnown RBP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 NUTM1Q86Y26 1132 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 AKT1S1Q96B36 256 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 MAGED1Q9Y5V3 778 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 SCAF11Q99590 1463 aaKnown RBP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 TCEA3O75764 348 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 FKBP4Q02790 459 aaKnown RBP eCLIP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 CDC37Q16543 378 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 CT47A1Q5JQC4 288 aaPredicted RBP6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 MKL1Q969V6 931 aa6.84□□□□□ -1.31
CTDSPL2-206ENST00000559175 RHOBTB3O94955 611 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 SLF2Q8IX21 1173 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 ZNF654Q8IZM8 581 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 OGFOD1Q8N543 542 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 EMID1Q96A84 441 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 NELL2Q99435 816 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 SMC4Q9NTJ3 1288 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 CD2APQ9Y5K6 639 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 TRIM64CA6NLI5 447 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 AKAP10O43572 662 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 SNX2O60749 519 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 PRPF40AO75400 957 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 TNNT1P13805 278 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 CCT2P78371 535 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 SLC20A2Q08357 652 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 NR1H3Q13133 447 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 NR6A1Q15406 480 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 TAF11Q15544 211 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 DIXDC1Q155Q3 683 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 PPHLN1Q8NEY8 458 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 SELENOOQ9BVL4 669 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 CNNM2Q9H8M5 875 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 CLEC11AQ9Y240 323 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 COL16A1Q07092 1604 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 LMO7Q8WWI1 1683 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 TMEM238LA0A1B0GVL6 79 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 RASSF10A6NK89 507 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 RGS20O76081 388 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 ECEL1O95672 775 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 TNNT3P45378 269 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 ZNF131P52739 623 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 ZNF579Q8NAF0 562 aaKnown RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 MPP4Q96JB8 637 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 FBXO2Q9UK22 296 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 PIK3R4Q99570 1358 aa6.83□□□□□ -1.32
CTDSPL2-206ENST00000559175 GOLGA6L3A6NEY3 463 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 NBPF7P0C2Y1 421 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 CCDC172P0C7W6 258 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 HALP42357 657 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 DAB2P98082 770 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 ALFQ53S48 1182 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 KIAA0907Q7Z7F0 614 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 CFAP53Q96M91 514 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 NBPF3Q9H094 633 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 SRA1Q9HD15 236 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 RIC8AQ9NPQ8 531 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 ST7Q9NRC1 585 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 TMEM63CQ9P1W3 806 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 WASHC2AQ641Q2 1341 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 PABPN1LA6NDY0 278 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 TREHO43280 583 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 CTSHP09668 335 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms