RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CRBNQ96SW2 442 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 TCF12Q99081 682 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 CBX8Q9HC52 389 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 STRN4Q9NRL3 753 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 UBP1Q9NZI7 540 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 SAMM50Q9Y512 469 aa3.32□□□□□ -1.88
GABPB1-209ENST00000559100 MRPL42Q9Y6G3 142 aaKnown RBP3.32□□□□□ -1.88
GABPB1-209ENST00000559100 COL17A1Q9UMD9 1497 aaPredicted RBP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 A0A096LPE4 126 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 A0A1W2PPZ6 126 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 EFSO43281 561 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 SMNDC1O75940 238 aaKnown RBP eCLIP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 MAP3K6O95382 1288 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 BPNT1O95861 308 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 SOX18P35713 384 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 CHMP4BP1P59074 171 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 TNP2Q05952 138 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 COL9A2Q14055 689 aaPredicted RBP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 LRP8Q14114 963 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 DOC2BQ14184 412 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 GRIN2CQ14957 1233 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 NBPF6Q5VWK0 638 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 PCNX4Q63HM2 1172 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 ZNF746Q6NUN9 644 aaPredicted RBP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 FOXR1Q6PIV2 292 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 HNRNPLLQ8WVV9 542 aaKnown RBP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 EAF1Q96JC9 268 aaPredicted RBP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 NBPF4Q96M43 638 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 HHIPQ96QV1 700 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 NT5C1AQ9BXI3 368 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 SRRTQ9BXP5 876 aaKnown RBP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 UBE2OQ9C0C9 1292 aaKnown RBP3.31□□□□□ -1.88
GABPB1-209ENST00000559100 MIR1-1HGQ9H1L0 117 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 DZANK1Q9NVP4 752 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 PPT2Q9UMR5 302 aa3.31□□□□□ -1.88
GABPB1-209ENST00000559100 SENP3-EIF4A1A0A087X0R7 540 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 LOC102724428A0A0B4J2F2 783 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 J3QW42 95 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 ENC1O14682 589 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 SMAD7O15105 426 aaKnown RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 BNIP3LO60238 219 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 PAGE1O75459 146 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 TFE3P19532 575 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 IBSPP21815 317 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 SOX9P48436 509 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 EIF6P56537 245 aaKnown RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 SIK1P57059 783 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 ATP11AP98196 1134 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 LMNB2Q03252 620 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 PTSQ03393 145 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 PCSK7Q16549 785 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 CWF19L2Q2TBE0 894 aaKnown RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 TNNI3KQ59H18 835 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 RNF187Q5TA31 235 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 CEP135Q66GS9 1140 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 BNC2Q6ZN30 1099 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 AGMOQ6ZNB7 445 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 JAZF1Q86VZ6 243 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 CEP120Q8N960 986 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 NXPE3Q969Y0 559 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 GTPBP3Q969Y2 492 aaKnown RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 RHOVQ96L33 236 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 TRERF1Q96PN7 1200 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 SLC30A3Q99726 388 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 RASSF4Q9H2L5 321 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 EFCC1Q9HA90 598 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 SEC31BQ9NQW1 1179 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 TMEM39AQ9NV64 488 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 SIRPGQ9P1W8 387 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 PRKAG3Q9UGI9 489 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 ATXN7L1Q9ULK2 861 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-209ENST00000559100 PHF24Q9UPV7 400 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 TBX22Q9Y458 520 aa3.3□□□□□ -1.88
GABPB1-209ENST00000559100 SBNO2Q9Y2G9 1366 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 hCG_2014768A0A024R1R8 64 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 CDC14CA4D256 554 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 TRIM37O94972 964 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 KIF4AO95239 1232 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 F13A1P00488 732 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 CPB1P15086 417 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 FGFR3P22607 806 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 HSD3B2P26439 372 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 CRKP46108 304 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 ZNF165P49910 485 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 NRLP54845 237 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 IFRD2Q12894 506 aaPredicted RBP3.29□□□□□ -1.88
GABPB1-209ENST00000559100 RAB33AQ14088 237 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 SEPT6Q14141 434 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 LRRC14Q15048 493 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 TCEAL1Q15170 157 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 PPP2R5EQ16537 467 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 DBN1Q16643 649 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 RPS26P11Q5JNZ5 115 aaPredicted RBP3.29□□□□□ -1.88
GABPB1-209ENST00000559100 LARP1BQ659C4 914 aaKnown RBP3.29□□□□□ -1.88
GABPB1-209ENST00000559100 FAM196AQ6ZSG2 479 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 FAM35AQ86V20 835 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 TRIM22Q8IYM9 498 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 NLGN1Q8N2Q7 840 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 CCDC155Q8N6L0 562 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 TMEM102Q8N9M5 508 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms