RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CAPNS2Q96L46 248 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 IPO9Q96P70 1041 aaKnown RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 COPRSQ9NQ92 184 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 C9orf78Q9NZ63 289 aaPredicted RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 PCDHB15Q9Y5E8 787 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 DOCK2Q92608 1830 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 AK9Q5TCS8 1911 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 TTLL13PA6NNM8 815 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 IRS4O14654 1257 aaPredicted RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 CIAO1O76071 339 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 TCF3P15923 654 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 EPHA10Q5JZY3 1008 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SMIM5Q71RC9 77 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 UBE3BQ7Z3V4 1068 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 SMC5Q8IY18 1101 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 KRI1Q8N9T8 703 aaKnown RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 TTLL11Q8NHH1 800 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 L3MBTL3Q96JM7 780 aaPredicted RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 BRIP1Q9BX63 1249 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 TRMT112Q9UI30 125 aaKnown RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 PNMA2Q9UL42 364 aa4.99□□□□□ -1.61
ZEB1-212ENST00000558655 LRRFIP2Q9Y608 721 aaKnown RBP4.99□□□□□ -1.61
ZEB1-212ENST00000558655 MYH7P12883 1935 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 AKAP11Q9UKA4 1901 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 HMMRO75330 724 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 PARNO95453 639 aaKnown RBP4.98□□□□□ -1.61
ZEB1-212ENST00000558655 GPTP24298 496 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 PSEN1P49768 467 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 ERFEQ4G0M1 354 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 TJAP1Q5JTD0 557 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 TMC4Q7Z404 712 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 NBPF5PQ86XG9 351 aaPredicted RBP4.98□□□□□ -1.61
ZEB1-212ENST00000558655 CNBD1Q8NA66 436 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 CRAMP1Q96RY5 1269 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 MTA3Q9BTC8 594 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 BICC1Q9H694 974 aaKnown RBP4.98□□□□□ -1.61
ZEB1-212ENST00000558655 DCTPP1Q9H773 170 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 ZNF330Q9Y3S2 320 aaPredicted RBP4.98□□□□□ -1.61
ZEB1-212ENST00000558655 TLL2Q9Y6L7 1015 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 IGHDP01880 384 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 MMP10P09238 476 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 ST5P78524 1137 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 STYK1Q6J9G0 422 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 RINLQ6ZS11 566 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 TMEM106CQ9BVX2 250 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 PARP3Q9Y6F1 533 aa4.98□□□□□ -1.61
ZEB1-212ENST00000558655 MAST2Q6P0Q8 1798 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 ITGBL1O95965 494 aaPredicted RBP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 LRIT3Q3SXY7 679 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 CCDC152Q4G0S7 254 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 CENPQQ7L2Z9 268 aaPredicted RBP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 FAM89AQ96GI7 184 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 GPR101Q96P66 508 aaPredicted RBP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 BACH2Q9BYV9 841 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 RWDD1Q9H446 243 aaPredicted RBP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 GPR108Q9NPR9 543 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 DACH1Q9UI36 760 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 PAPPA2Q9BXP8 1791 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 ATMINO43313 823 aaPredicted RBP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 PDE6BP35913 854 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 MCCD1P59942 119 aaPredicted RBP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 PTPN12Q05209 780 aaKnown RBP4.97□□□□□ -1.61
ZEB1-212ENST00000558655 MORC4Q8TE76 937 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 CFHR5Q9BXR6 569 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 LTBP3Q9NS15 1303 aa4.97□□□□□ -1.61
ZEB1-212ENST00000558655 PNMA6EA0A0J9YXQ4 647 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 CREB3O43889 395 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 NPR1P16066 1061 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 LMNB1P20700 586 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 NOGQ13253 232 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 MYBPC2Q14324 1141 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 TSR1Q2NL82 804 aaKnown RBP4.96□□□□□ -1.62
ZEB1-212ENST00000558655 LONRF3Q496Y0 759 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 LMBR1LQ6UX01 489 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 ARHGAP27Q6ZUM4 889 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 C3orf67Q6ZVT6 689 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 PNMA8AQ86V59 439 aaPredicted RBP4.96□□□□□ -1.62
ZEB1-212ENST00000558655 ERC1Q8IUD2 1116 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 UBXN4Q92575 508 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 PMM1Q92871 262 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 NLRP3Q96P20 1036 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 ZNF609O15014 1411 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 CCDC88AQ3V6T2 1871 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 POTEFA5A3E0 1075 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 SRGNP10124 158 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 GTF2E1P29083 439 aaPredicted RBP4.96□□□□□ -1.62
ZEB1-212ENST00000558655 ZFYVE27Q5T4F4 411 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 KRBA2Q6ZNG9 492 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 C15orf52Q6ZUT6 534 aaKnown RBP4.96□□□□□ -1.62
ZEB1-212ENST00000558655 SYNE4Q8N205 404 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 MTMR10Q9NXD2 777 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 IRS2Q9Y4H2 1338 aa4.96□□□□□ -1.62
ZEB1-212ENST00000558655 ANKRD18BA2A2Z9 1011 aa4.95□□□□□ -1.62
ZEB1-212ENST00000558655 EYA2O00167 538 aa4.95□□□□□ -1.62
ZEB1-212ENST00000558655 SRGAP3O43295 1099 aa4.95□□□□□ -1.62
ZEB1-212ENST00000558655 GRAPQ13588 217 aa4.95□□□□□ -1.62
ZEB1-212ENST00000558655 MAMSTRQ6ZN01 415 aa4.95□□□□□ -1.62
ZEB1-212ENST00000558655 TSHZ1Q6ZSZ6 1077 aa4.95□□□□□ -1.62
ZEB1-212ENST00000558655 ATG9AQ7Z3C6 839 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms