RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 H3BRB1 525 aa10.21□□□□□ -0.77
PSMA4-208ENST00000558639 ICMTO60725 284 aa10.21□□□□□ -0.77
PSMA4-208ENST00000558639 FKBP4Q02790 459 aaKnown RBP eCLIP10.21□□□□□ -0.77
PSMA4-208ENST00000558639 GNASQ5JWF2 1037 aa10.21□□□□□ -0.77
PSMA4-208ENST00000558639 CAPN12Q6ZSI9 719 aa10.21□□□□□ -0.77
PSMA4-208ENST00000558639 SMIM5Q71RC9 77 aa10.21□□□□□ -0.77
PSMA4-208ENST00000558639 FLAD1Q8NFF5 587 aa10.21□□□□□ -0.77
PSMA4-208ENST00000558639 INSM2Q96T92 566 aaPredicted RBP10.21□□□□□ -0.77
PSMA4-208ENST00000558639 NIFKQ9BYG3 293 aaKnown RBP10.21□□□□□ -0.77
PSMA4-208ENST00000558639 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.77
PSMA4-208ENST00000558639 NSD2O96028 1365 aa10.21□□□□□ -0.78
PSMA4-208ENST00000558639 NSD3Q9BZ95 1437 aa10.21□□□□□ -0.78
PSMA4-208ENST00000558639 FAM208AQ9UK61 1670 aaKnown RBP10.21□□□□□ -0.78
PSMA4-208ENST00000558639 SPINT1O43278 529 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 BMP2P12643 396 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 NOS2P35228 1153 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 TEAD4Q15561 434 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 RHBDD1Q8TEB9 315 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 PALLDQ8WX93 1383 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 PIGBQ92521 554 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 POLKQ9UBT6 870 aa10.2□□□□□ -0.78
PSMA4-208ENST00000558639 DNMT3AQ9Y6K1 912 aaPredicted RBP10.2□□□□□ -0.78
PSMA4-208ENST00000558639 DOT1LQ8TEK3 1739 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 WASHC2AQ641Q2 1341 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 GRIN3BO60391 1043 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 RNF144AP50876 292 aaPredicted RBP10.19□□□□□ -0.78
PSMA4-208ENST00000558639 C16orf46Q6P387 395 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 IFNL2Q8IZJ0 200 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 PANK3Q9H999 370 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 TMOD3Q9NYL9 352 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 WWC3Q9ULE0 1092 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 USP3Q9Y6I4 520 aa10.19□□□□□ -0.78
PSMA4-208ENST00000558639 PAPPAQ13219 1627 aa10.18□□□□□ -0.78
PSMA4-208ENST00000558639 KIF24Q5T7B8 1368 aa10.18□□□□□ -0.78
PSMA4-208ENST00000558639 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
PSMA4-208ENST00000558639 SCARF1Q14162 830 aa10.18□□□□□ -0.78
PSMA4-208ENST00000558639 HELQQ8TDG4 1101 aa10.18□□□□□ -0.78
PSMA4-208ENST00000558639 GRIP2Q9C0E4 1043 aa10.18□□□□□ -0.78
PSMA4-208ENST00000558639 MAP3K5Q99683 1374 aa10.17□□□□□ -0.78
PSMA4-208ENST00000558639 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
PSMA4-208ENST00000558639 HSPA5P11021 654 aaKnown RBP10.17□□□□□ -0.78
PSMA4-208ENST00000558639 YBX3P16989 372 aaKnown RBP eCLIP10.17□□□□□ -0.782e-10■■□□□ 13.4
PSMA4-208ENST00000558639 SIK1P57059 783 aa10.17□□□□□ -0.78
PSMA4-208ENST00000558639 C6orf118Q5T5N4 469 aa10.17□□□□□ -0.78
PSMA4-208ENST00000558639 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
PSMA4-208ENST00000558639 ASAP1Q9ULH1 1129 aa10.17□□□□□ -0.78
PSMA4-208ENST00000558639 LY75O60449 1722 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 EML1O00423 815 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 FAM13AO94988 1023 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 AVPP01185 164 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 PHKG2P15735 406 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 HIRAP54198 1017 aaPredicted RBP10.16□□□□□ -0.78
PSMA4-208ENST00000558639 C1QTNF8P60827 252 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 MTMR3Q13615 1198 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 EIF4A2Q14240 407 aaKnown RBP10.16□□□□□ -0.78
PSMA4-208ENST00000558639 PKDCCQ504Y2 493 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 PLEKHO1Q53GL0 409 aaPredicted RBP10.16□□□□□ -0.78
PSMA4-208ENST00000558639 MORC1Q86VD1 984 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 RGS22Q8NE09 1264 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 CD2APQ9Y5K6 639 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 PARP3Q9Y6F1 533 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 MAP2P11137 1827 aaKnown RBP10.16□□□□□ -0.78
PSMA4-208ENST00000558639 KIF20BQ96Q89 1820 aa10.16□□□□□ -0.78
PSMA4-208ENST00000558639 CHD4Q14839 1912 aa10.15□□□□□ -0.78
PSMA4-208ENST00000558639 CTSOP43234 321 aaPredicted RBP10.15□□□□□ -0.78
PSMA4-208ENST00000558639 MARSP56192 900 aaKnown RBP10.15□□□□□ -0.78
PSMA4-208ENST00000558639 CABP4P57796 275 aa10.15□□□□□ -0.78
PSMA4-208ENST00000558639 CTC1Q2NKJ3 1217 aa10.15□□□□□ -0.78
PSMA4-208ENST00000558639 LINC00116Q8NCU8 138 aa10.15□□□□□ -0.78
PSMA4-208ENST00000558639 ATG3Q9NT62 314 aa10.15□□□□□ -0.78
PSMA4-208ENST00000558639 HCN4Q9Y3Q4 1203 aa10.15□□□□□ -0.78
PSMA4-208ENST00000558639 SHANK3Q9BYB0 1731 aa10.15□□□□□ -0.78
PSMA4-208ENST00000558639 GFRA3O60609 400 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 DGAT1O75907 488 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 COX20Q5RI15 118 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 TRAPPC3LQ5T215 181 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 AMIGO3Q86WK7 504 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 ALDH16A1Q8IZ83 802 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 ZDHHC1Q8WTX9 485 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 MYO19Q96H55 970 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 SAP130Q9H0E3 1048 aa10.14□□□□□ -0.79
PSMA4-208ENST00000558639 PLA2G4AP47712 749 aa10.13□□□□□ -0.79
PSMA4-208ENST00000558639 MTHFSP49914 203 aa10.13□□□□□ -0.79
PSMA4-208ENST00000558639 ITPK1Q13572 414 aa10.13□□□□□ -0.79
PSMA4-208ENST00000558639 CNGB1Q14028 1251 aaPredicted RBP10.13□□□□□ -0.79
PSMA4-208ENST00000558639 ZNF526Q8TF50 670 aaPredicted RBP10.13□□□□□ -0.79
PSMA4-208ENST00000558639 AIDAQ96BJ3 306 aa10.13□□□□□ -0.79
PSMA4-208ENST00000558639 STIM2Q9P246 746 aa10.13□□□□□ -0.79
PSMA4-208ENST00000558639 RTCBQ9Y3I0 505 aaKnown RBP10.13□□□□□ -0.79
PSMA4-208ENST00000558639 KNSTRNQ9Y448 316 aa10.13□□□□□ -0.79
PSMA4-208ENST00000558639 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
PSMA4-208ENST00000558639 SPATA31C2B4DYI2 1134 aa10.12□□□□□ -0.79
PSMA4-208ENST00000558639 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
PSMA4-208ENST00000558639 HSP90AB1P08238 724 aaKnown RBP10.12□□□□□ -0.79
PSMA4-208ENST00000558639 RTN1Q16799 776 aa10.12□□□□□ -0.79
PSMA4-208ENST00000558639 C4orf17Q53FE4 359 aa10.12□□□□□ -0.79
PSMA4-208ENST00000558639 C1orf141Q5JVX7 400 aa10.12□□□□□ -0.79
PSMA4-208ENST00000558639 SH3PXD2AQ5TCZ1 1133 aa10.12□□□□□ -0.79
PSMA4-208ENST00000558639 C1orf53Q5VUE5 145 aa10.12□□□□□ -0.79
PSMA4-208ENST00000558639 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms