RNA–Protein interactions for RNA: ENST00000558619.5

CRTC3-206, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-206ENST00000558619 FBXO33Q7Z6M2 555 aa21.57■■□□□ 1.04
CRTC3-206ENST00000558619 DZIP1LQ8IYY4 767 aaKnown RBP21.57■■□□□ 1.04
CRTC3-206ENST00000558619 VGLL2Q8N8G2 317 aa21.57■■□□□ 1.04
CRTC3-206ENST00000558619 ANKRD13AQ8IZ07 590 aa21.56■■□□□ 1.04
CRTC3-206ENST00000558619 TBC1D22AQ8WUA7 517 aa21.56■■□□□ 1.04
CRTC3-206ENST00000558619 USP44Q9H0E7 712 aa21.56■■□□□ 1.04
CRTC3-206ENST00000558619 SMC4Q9NTJ3 1288 aa21.56■■□□□ 1.04
CRTC3-206ENST00000558619 HPS5Q9UPZ3 1129 aa21.56■■□□□ 1.04
CRTC3-206ENST00000558619 FKTNO75072 461 aa21.55■■□□□ 1.04
CRTC3-206ENST00000558619 USP2O75604 605 aaPredicted RBP21.55■■□□□ 1.04
CRTC3-206ENST00000558619 TNNI2P48788 182 aa21.55■■□□□ 1.04
CRTC3-206ENST00000558619 IFNL1Q8IU54 200 aa21.55■■□□□ 1.04
CRTC3-206ENST00000558619 TCP10L2B9ZVM9 353 aa21.54■■□□□ 1.04
CRTC3-206ENST00000558619 PUM3Q15397 648 aaKnown RBP21.54■■□□□ 1.04
CRTC3-206ENST00000558619 R3HDMLQ9H3Y0 253 aa21.54■■□□□ 1.04
CRTC3-206ENST00000558619 IFIT1P09914 478 aaKnown RBP21.53■■□□□ 1.04
CRTC3-206ENST00000558619 GRIK5Q16478 980 aa21.53■■□□□ 1.04
CRTC3-206ENST00000558619 CDCA7LQ96GN5 454 aa21.53■■□□□ 1.04
CRTC3-206ENST00000558619 KIF16BQ96L93 1317 aa21.53■■□□□ 1.04
CRTC3-206ENST00000558619 IGF2BP3O00425 579 aaKnown RBP eCLIP21.52■■□□□ 1.04
CRTC3-206ENST00000558619 BCAMP50895 628 aa21.52■■□□□ 1.04
CRTC3-206ENST00000558619 TEKT1Q969V4 418 aa21.52■■□□□ 1.04
CRTC3-206ENST00000558619 TMEM39BQ9GZU3 492 aa21.52■■□□□ 1.04
CRTC3-206ENST00000558619 ELP3Q9H9T3 547 aa21.52■■□□□ 1.04
CRTC3-206ENST00000558619 MAST3O60307 1309 aa21.52■■□□□ 1.03
CRTC3-206ENST00000558619 TNRC18O15417 2968 aaPredicted RBP21.51■■□□□ 1.03
CRTC3-206ENST00000558619 HDLBPQ00341 1268 aaKnown RBP21.51■■□□□ 1.03
CRTC3-206ENST00000558619 OTUD7BQ6GQQ9 843 aa21.51■■□□□ 1.03
CRTC3-206ENST00000558619 FBXO46Q6PJ61 603 aaPredicted RBP21.51■■□□□ 1.03
CRTC3-206ENST00000558619 CDAN1Q8IWY9 1227 aa21.51■■□□□ 1.03
CRTC3-206ENST00000558619 TEPSINQ96N21 525 aa21.51■■□□□ 1.03
CRTC3-206ENST00000558619 EYA2O00167 538 aa21.5■■□□□ 1.03
CRTC3-206ENST00000558619 SLC5A1P13866 664 aa21.5■■□□□ 1.03
CRTC3-206ENST00000558619 FGFR2P21802 821 aa21.5■■□□□ 1.03
CRTC3-206ENST00000558619 GJA5P36382 358 aa21.5■■□□□ 1.03
CRTC3-206ENST00000558619 OPTNQ96CV9 577 aa21.5■■□□□ 1.03
CRTC3-206ENST00000558619 TMOD2Q9NZR1 351 aa21.5■■□□□ 1.03
CRTC3-206ENST00000558619 UBTFL1P0CB47 393 aaPredicted RBP21.49■■□□□ 1.03
CRTC3-206ENST00000558619 RFX5P48382 616 aaPredicted RBP21.49■■□□□ 1.03
CRTC3-206ENST00000558619 LPIN2Q92539 896 aa21.49■■□□□ 1.03
CRTC3-206ENST00000558619 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
CRTC3-206ENST00000558619 SUGT1Q9Y2Z0 365 aa21.48■■□□□ 1.03
CRTC3-206ENST00000558619 CACNB3P54284 484 aa21.47■■□□□ 1.03
CRTC3-206ENST00000558619 TRMT2AQ8IZ69 625 aaKnown RBP21.47■■□□□ 1.03
CRTC3-206ENST00000558619 ZDHHC15Q96MV8 337 aa21.47■■□□□ 1.03
CRTC3-206ENST00000558619 SIL1Q9H173 461 aa21.47■■□□□ 1.03
CRTC3-206ENST00000558619 NOB1Q9ULX3 412 aaKnown RBP21.47■■□□□ 1.03
CRTC3-206ENST00000558619 TRIM17Q9Y577 477 aa21.47■■□□□ 1.03
CRTC3-206ENST00000558619 CSADQ9Y600 493 aa21.47■■□□□ 1.03
CRTC3-206ENST00000558619 CRHR2Q13324 411 aa21.46■■□□□ 1.03
CRTC3-206ENST00000558619 VGLL4Q14135 290 aa21.46■■□□□ 1.03
CRTC3-206ENST00000558619 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.46■■□□□ 1.03
CRTC3-206ENST00000558619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.46■■□□□ 1.03
CRTC3-206ENST00000558619 MRIQ9BWK5 157 aa21.46■■□□□ 1.03
CRTC3-206ENST00000558619 TESPA1A2RU30 521 aaPredicted RBP21.45■■□□□ 1.02
CRTC3-206ENST00000558619 MAP3K9P80192 1104 aa21.45■■□□□ 1.02
CRTC3-206ENST00000558619 ATG9AQ7Z3C6 839 aa21.45■■□□□ 1.02
CRTC3-206ENST00000558619 WDR66Q8TBY9 1149 aa21.45■■□□□ 1.02
CRTC3-206ENST00000558619 API5Q9BZZ5 524 aaKnown RBP21.45■■□□□ 1.02
CRTC3-206ENST00000558619 HHIPL2Q6UWX4 724 aa21.44■■□□□ 1.02
CRTC3-206ENST00000558619 CNKSR2Q8WXI2 1034 aa21.44■■□□□ 1.02
CRTC3-206ENST00000558619 HOOK2Q96ED9 719 aa21.44■■□□□ 1.02
CRTC3-206ENST00000558619 ERO1AQ96HE7 468 aa21.44■■□□□ 1.02
CRTC3-206ENST00000558619 PTPN18Q99952 460 aa21.44■■□□□ 1.02
CRTC3-206ENST00000558619 FBXO3Q9UK99 471 aa21.44■■□□□ 1.02
CRTC3-206ENST00000558619 CIAO1O76071 339 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 GTF2A2P52657 109 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 ATP2B3Q16720 1220 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 APOBEC3HQ6NTF7 200 aaKnown RBP21.43■■□□□ 1.02
CRTC3-206ENST00000558619 OTOP1Q7RTM1 612 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 FAM83AQ86UY5 434 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 OTUD5Q96G74 571 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 HDAC5Q9UQL6 1122 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 RPAP1Q9BWH6 1393 aaPredicted RBP21.43■■□□□ 1.02
CRTC3-206ENST00000558619 AK9Q5TCS8 1911 aa21.43■■□□□ 1.02
CRTC3-206ENST00000558619 FKBP1CQ5VVH2 108 aa21.42■■□□□ 1.02
CRTC3-206ENST00000558619 CD99L2Q8TCZ2 262 aa21.42■■□□□ 1.02
CRTC3-206ENST00000558619 MS4A4AQ96JQ5 239 aa21.42■■□□□ 1.02
CRTC3-206ENST00000558619 WRNIP1Q96S55 665 aa21.42■■□□□ 1.02
CRTC3-206ENST00000558619 GNL3LQ9NVN8 582 aaKnown RBP21.42■■□□□ 1.02
CRTC3-206ENST00000558619 CEP126Q9P2H0 1117 aa21.42■■□□□ 1.02
CRTC3-206ENST00000558619 LRRFIP2Q9Y608 721 aaKnown RBP21.42■■□□□ 1.02
CRTC3-206ENST00000558619 CCL15-CCL14A0A0B4J2E2 113 aa21.41■■□□□ 1.02
CRTC3-206ENST00000558619 CCL15Q16663 113 aa21.41■■□□□ 1.02
CRTC3-206ENST00000558619 IL15P40933 162 aaPredicted RBP21.4■■□□□ 1.02
CRTC3-206ENST00000558619 SP3Q02447 781 aa21.4■■□□□ 1.02
CRTC3-206ENST00000558619 TAF1CQ15572 869 aaPredicted RBP21.4■■□□□ 1.02
CRTC3-206ENST00000558619 DCAF15Q66K64 600 aa21.4■■□□□ 1.02
CRTC3-206ENST00000558619 BRI3BPQ8WY22 251 aa21.4■■□□□ 1.02
CRTC3-206ENST00000558619 SNCAIPQ9Y6H5 919 aa21.4■■□□□ 1.02
CRTC3-206ENST00000558619 SPDYE5A6NIY4 337 aa21.39■■□□□ 1.01
CRTC3-206ENST00000558619 CCER2I3L3R5 266 aa21.39■■□□□ 1.01
CRTC3-206ENST00000558619 MEIS3Q99687 375 aa21.39■■□□□ 1.01
CRTC3-206ENST00000558619 ZFYVE28Q9HCC9 887 aa21.39■■□□□ 1.01
CRTC3-206ENST00000558619 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.01
CRTC3-206ENST00000558619 DAGLAQ9Y4D2 1042 aa21.39■■□□□ 1.01
CRTC3-206ENST00000558619 DOCK2Q92608 1830 aa21.39■■□□□ 1.01
CRTC3-206ENST00000558619 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
CRTC3-206ENST00000558619 MYH2Q9UKX2 1941 aa21.38■■□□□ 1.01
CRTC3-206ENST00000558619 LDHBP07195 334 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms