RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 IFIT1P09914 478 aaKnown RBP9.64□□□□□ -0.87
RTF1-205ENST00000558298 SLC5A1P13866 664 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 NASPP49321 788 aaPredicted RBP9.64□□□□□ -0.87
RTF1-205ENST00000558298 FGD1P98174 961 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 C20orf194Q5TEA3 1177 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 RSBN1LQ6PCB5 846 aaPredicted RBP9.64□□□□□ -0.87
RTF1-205ENST00000558298 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 USP17L1Q7RTZ2 530 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 ERC1Q8IUD2 1116 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 SMC5Q8IY18 1101 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 CNTROBQ8N137 903 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 FAM84BQ96KN1 310 aaPredicted RBP9.64□□□□□ -0.87
RTF1-205ENST00000558298 CEP126Q9P2H0 1117 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 CNOT7Q9UIV1 285 aaKnown RBP9.64□□□□□ -0.87
RTF1-205ENST00000558298 PRDM4Q9UKN5 801 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 NOL7Q9UMY1 257 aaKnown RBP9.64□□□□□ -0.87
RTF1-205ENST00000558298 AKAP2Q9Y2D5 859 aa9.64□□□□□ -0.87
RTF1-205ENST00000558298 POLR2AP24928 1970 aaKnown RBP9.64□□□□□ -0.87
RTF1-205ENST00000558298 DOCK2Q92608 1830 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 SALL1Q9NSC2 1324 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 HIBADHP31937 336 aaKnown RBP9.63□□□□□ -0.87
RTF1-205ENST00000558298 FAM193AP78312 1265 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 RBM10P98175 930 aaKnown RBP9.63□□□□□ -0.87
RTF1-205ENST00000558298 KLHL40Q2TBA0 621 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 TBC1D22AQ8WUA7 517 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 ZNF512BQ96KM6 892 aaPredicted RBP9.63□□□□□ -0.87
RTF1-205ENST00000558298 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 CCDC94Q9BW85 323 aaPredicted RBP9.63□□□□□ -0.87
RTF1-205ENST00000558298 C22orf23Q9BZE7 217 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
RTF1-205ENST00000558298 PA2G4Q9UQ80 394 aaKnown RBP9.63□□□□□ -0.87
RTF1-205ENST00000558298 COL1A1P02452 1464 aaPredicted RBP9.63□□□□□ -0.87
RTF1-205ENST00000558298 PITPNM2Q9BZ72 1349 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 RASSF10A6NK89 507 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 TMEM88BA6NKF7 163 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 FMR1Q06787 632 aaKnown RBP eCLIP9.62□□□□□ -0.871e-6■■■□□ 18.6
RTF1-205ENST00000558298 DMTNQ08495 405 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 ATP2B3Q16720 1220 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 CST9Q5W186 159 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 SIRT2Q8IXJ6 389 aa9.62□□□□□ -0.87
RTF1-205ENST00000558298 HELBQ8NG08 1087 aaPredicted RBP9.62□□□□□ -0.87
RTF1-205ENST00000558298 ZBED3Q96IU2 234 aaPredicted RBP9.62□□□□□ -0.87
RTF1-205ENST00000558298 LAMB1P07942 1786 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 A0A1B0GUL7 405 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 G3V3G9 751 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 TRAF5O00463 557 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 RAB11FIP3O75154 756 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 ZNF445P59923 1031 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
RTF1-205ENST00000558298 G3BP1Q13283 466 aaKnown RBP eCLIP9.61□□□□□ -0.87
RTF1-205ENST00000558298 RAB3GAP1Q15042 981 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 DCAF8Q5TAQ9 597 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 TTLL5Q6EMB2 1281 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 TMED8Q6PL24 325 aaPredicted RBP9.61□□□□□ -0.87
RTF1-205ENST00000558298 CERS5Q8N5B7 392 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 MRIQ9BWK5 157 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 SIL1Q9H173 461 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
RTF1-205ENST00000558298 ASTN2O75129 1339 aaPredicted RBP9.6□□□□□ -0.87
RTF1-205ENST00000558298 H7C1D1 291 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 ARID4AP29374 1257 aaPredicted RBP9.6□□□□□ -0.87
RTF1-205ENST00000558298 NUCB2P80303 420 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 KIF4BQ2VIQ3 1234 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 TBC1D10BQ4KMP7 808 aaPredicted RBP9.6□□□□□ -0.87
RTF1-205ENST00000558298 TNNI3KQ59H18 835 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 KIF1BPQ96EK5 621 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 MXD3Q9BW11 206 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 GLIS2Q9BZE0 524 aaPredicted RBP9.6□□□□□ -0.87
RTF1-205ENST00000558298 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 FPGT-TNNI3KV9GXZ4 949 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 PAPPA2Q9BXP8 1791 aa9.6□□□□□ -0.87
RTF1-205ENST00000558298 MAST3O60307 1309 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 SURF6O75683 361 aaKnown RBP9.59□□□□□ -0.87
RTF1-205ENST00000558298 DDIT3P35638 169 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 GYG1P46976 350 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 TFCP2Q12800 502 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
RTF1-205ENST00000558298 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 CDC37L1Q7L3B6 337 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 VPS37DQ86XT2 251 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 CREBRFQ8IUR6 639 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 ZGPATQ8N5A5 531 aaKnown RBP9.59□□□□□ -0.87
RTF1-205ENST00000558298 WDR66Q8TBY9 1149 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 PANK2Q9BZ23 570 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 MYOZ2Q9NPC6 264 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 GNL3LQ9NVN8 582 aaKnown RBP9.59□□□□□ -0.87
RTF1-205ENST00000558298 DENND2AQ9ULE3 1009 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 TLL2Q9Y6L7 1015 aa9.59□□□□□ -0.87
RTF1-205ENST00000558298 GTF2IP78347 998 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 MFSD14BQ5SR56 506 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.58□□□□□ -0.88
RTF1-205ENST00000558298 XAGE2Q96GT9 111 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 HHIPL1Q96JK4 782 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 PDLIM2Q96JY6 352 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 DCTPP1Q9H773 170 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms